Gcaud1744.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1744.t1
Unique NameGcaud1744.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length276
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4592_length_2142_cov_7.603608contigNODE_4592_length_2142_cov_7.603608:262..1089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1744.t1Gcaud1744.t1Gracilaria caudata M_176_S67 malemRNANODE_4592_length_2142_cov_7.603608 262..1089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1744.t1 ID=Gcaud1744.t1|Name=Gcaud1744.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=276bp
MSEPFQREVLILKTSIVTEDCVGLKDLTCSKSNAITRISKANMVGNDEDE
MLLVRRPASDVQASTDDTKTLHSTAEHDFQAVANALYILVAMLVTYFFYA
LIQAKPCINVTAHNNAKKRFRGSRGRRRGGNEPKVINDGYSRAQMLQQND
EEQTDITQNRERSGKVRNRDAYGQRGGRGGRGGRGGRGGRGGRGGRGGRG
GRRSRSNTARQPSASIDEKQEDTSADITRDDINPDDQKEHQRLDGRRARG
GCTSAERRRNNTSKYFNQVQAHKST*
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