Gcaud2110.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2110.t1
Unique NameGcaud2110.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length812
Homology
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A2V3J4T6_9FLOR (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4T6_9FLOR)

HSP 1 Score: 797 bits (2058), Expect = 1.340e-278
Identity = 453/839 (53.99%), Postives = 555/839 (66.15%), Query Frame = 0
Query:    1 MRGFKHQNVPLPPRILEHPQQWRLERWLVQPGARVHREQRIATFRSSSNAALEYAYAPRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSLHFAETKNTVERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSRAFTTYA-----VDPRGTPEAAAARAN-QQNETQLS-------NKLHASKPSQNGHEVKHTNGMV------SHAETLRKRNEASGRPQSNREKACMWENGNRPIRTDIVAGVS-------NVHTSRHVSETEVVGVALNGISQTVDQKEQNGSSPHNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEKVKSEHKTVVRTQDQELQNGVSEGKELKQSASSEGDSAQTNVSFRGVFTDLVHKWWKKETHPKSSRHLLRLADVLEECHSRFFSIADQARKECGAVRNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCSVEFENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDEFEYQLDRDNRFSTSEQLQSWIRSNFAKAETACRKRSALHIQDKQAGDDGHMPKRRRLDSPT--ASVRESGSRSPVADGAMLSILSQDEIGAAIEAAFAE 811
            MRG+K ++V LP R+L+ P QWRL+RWLV   A VHREQR+ATF+S S  A+EYA+APRSG +V T +QQ+  VDP+ S LA IEFC H+VVFKGICA+CGETA SLHFAETK  VERIPVAY+S QLAVSRAEAES +SVNAR+LL S+RLSLVLDLDHTL+HATDD RAP++I+ FP   D+ SVKAF L A   HPN    MHVKLRPHL EFL R+S+KFELHIYTMGTR YA +IA++IDPHKKLFGGRITSREDF EGRWNQKSIQRLFPCDDSMVLIVDDREDVWIS+TGQSFMPNLIRA+PYHFWDGLHE Y R   T        +  GT + + +     +N+T+         N LH        H  ++TNG +      S  +  R    AS  P +    A   E+     +T+   GVS        VH     S              T D K  NG +     H +                                 N  AA+     SL     EH  V         +G        ++     DS+ T      +F++LV+ WWK++  PK+S HLL+LA+VLEECHSRFFSIA QA++E GAV  G + KRFR PADVK+ILA+VRRE+L+ECVV FTGVIPTGVDP  S  W+LA+RLGAQCS+E+ENG TTHLV SE RGRNTRKYK+A+ESG+A+V+SP+WL+  A  FE+QDEF+YQLD+D+RF +S   +SWI +NFAKA ++CRKR+   + + QAG  G   KRR++DSP+  +S+R S  RSP+ADG M+S+L+ DEIGAAIEAAF E
Sbjct:    1 MRGYKQEHVQLPERVLQQPAQWRLDRWLVNNSASVHREQRLATFKSLSTGAVEYAFAPRSGKIVKTFIQQSSTVDPAASALALIEFCTHAVVFKGICAICGETAQSLHFAETKTAVERIPVAYDSNQLAVSRAEAESIASVNARNLLHSQRLSLVLDLDHTLVHATDDPRAPQVINHFPPDADLHSVKAFAL-APVIHPNAPPLMHVKLRPHLFEFLHRLSNKFELHIYTMGTRPYADQIANLIDPHKKLFGGRITSREDFEEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISSTGQSFMPNLIRADPYHFWDGLHEAYDRVSATNGRLSTKSNAVGTTDTSKSLLKPNENDTEKEAPRTINGNALHVI------HNTEYTNGTLAASGIDSEEDNTRTPTSASASPDTALPDA---ESPASEPQTNAFNGVSADRAQQERVHDGDG-SSXXXXXXXXXXXDGTFDGKRGNGFAEQAKEHST-------------------------------PGNATAADDTPPASL---LDEHSPVPNESAIPDASGT-------RTLCENADSSST------LFSELVNSWWKQDADPKASNHLLKLAEVLEECHSRFFSIASQAQRESGAVNKGPA-KRFRPPADVKRILASVRREVLQECVVCFTGVIPTGVDPHSSPYWSLAKRLGAQCSLEYENGHTTHLVTSETRGRNTRKYKQAMESGAAYVISPAWLDDSAVRFERQDEFDYQLDKDDRFKSSNDYRSWINNNFAKAASSCRKRNVTQLYENQAGAAGSA-KRRKVDSPSRNSSLRGSECRSPMADG-MVSVLTADEIGAAIEAAFGE 778          
BLAST of Gcaud2110.t1 vs. uniprot
Match: R7QQX4_CHOCR (Protein-serine/threonine phosphatase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQX4_CHOCR)

HSP 1 Score: 322 bits (824), Expect = 1.310e-96
Identity = 224/620 (36.13%), Postives = 321/620 (51.77%), Query Frame = 0
Query:  205 MHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSRAFTTYAVDPRGTPEAAAARANQQNETQLSNKLHASKPSQNGHEVKHTNGMVSHAETLRKRNEASGRPQSNREKACMWENGNRPIRTDIVAGVSNVHTSRHVSETEVVGVALNGISQTVDQKEQNGSSPHNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEKVKSEHKTVVR-----------TQDQELQNGVSEGKELKQSASSEGDSAQTNVSFRGVFTDLVHKWWKKETHPKSSRHLLRLADVLEECHSRFFSIADQARKECGAVRNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCSVEFENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDEFEYQLDRDNRFSTSEQLQSWIRSNFAKAETACRKRSALHIQDKQAGDD--GHMPKRRRLDSPTASVRESGSRSPVADGAMLSILSQDEIGAAIEAAFAE 811
            MH+K+RP+L  FL  +  KF LHIYTMG+R YA ++A +IDP  + FGGRITSREDF EG  NQK+IQRLFPCDDSM LIVDDREDVW+S + Q +MPNL+RA+PYHFW G+HE Y R      V P   PE     A+Q           A KPS  G    +T    +   TL           +N +      NGN  I     A   N+ +  + S  +  G+ +    +   +  + G    N ++D  K       P AP+    T     +       + G +   VG+ + E  K    T +            T++ E +NG +  + +K    S G++  TNV     F  +   WW+ ++ PKS  HLLRLA VLE+CH  FF    ++RK    V   ++ ++F++PADVK IL+  R+++L  CV++F+G+ P    P     WNLA RLGA CS EF +G TTH++ S +R  +T+K   A+ SG+A+VV+  W+E CA +FE+Q+E  Y       F   E+ + ++ +   KA  A RKR    + D+  G++  G +P ++   S    V +          A + ILS DEIG  +E  F E
Sbjct:    1 MHLKVRPNLNHFLETLRVKFNLHIYTMGSRLYADRVAKLIDPDNRFFGGRITSREDFPEGNCNQKNIQRLFPCDDSMALIVDDREDVWLSDSTQPYMPNLLRAQPYHFWVGMHEAYDR------VAP---PEHHNPTAHQL----------ADKPS--GGSTDNTQQPPAVQGTL----------TTNSDNTTTIGNGN-DISNHRHA---NLDSPANDSPFQPTGLKVQQPEEADARHAEGGMESPNYSNDVAK-----NSPTAPEDTAITVLSPPQLELRPSQTVGPSEGTVGAATSEPEKQLSATNIHETDRTNAHDHETKESEQENGDTSARSIKPDGHS-GEA--TNVE---KFRSIAKGWWETDSSPKSRSHLLRLAQVLEDCHKEFFDRC-KSRKAHNGVEAQSAGQQFQSPADVKDILSEFRKKVLAGCVLTFSGLKPRKDAPETVPEWNLALRLGASCSSEFVHGRTTHVITSLKRVPDTQKCMDAMHSGTAYVVTTDWVEDCALNFERQNELAYCESAQQMFDDGEKFRDYVETRREKAAQALRKRGREEL-DEIYGNEVVGTIPWKKSRVSEEMDVMDDTGLEGTNGTAAVRILSHDEIGEVMEDLFVE 572          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A7S3A5N5_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N5_9RHOD)

HSP 1 Score: 268 bits (686), Expect = 4.630e-78
Identity = 151/310 (48.71%), Postives = 195/310 (62.90%), Query Frame = 0
Query:   23 RLERWLVQPGARVHREQRIATFRSSSNAALEYAYAPRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSLHFAETKNTVERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMH----------VKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSR 322
            +L +WLV+ G  V    RIAT   ++ + L+   APR GT+V   ++    +  ++ P+  I+FC H+V+F G+C +CG     +HF++   + +R+ VAYES  L VSR EA    +  ARHLL+ R LSLVLDLDHTLLHATDD RA   +      +D QS +    G     P +   +H          VKLRP L  FL R+  KFELHIYTMGTR YA  IA IIDP + LFG R+TSR+DF EG  NQK+++R+FPCDD+MVLIVDDREDVW+     S MPNLI+A PYHF+ GLHE Y R
Sbjct:   20 KLVKWLVREGEEVDEGTRIATVEKANASKLD-VLAPRCGTMVGVGVKIGEELKENV-PICSIQFCTHAVIFGGLCTICGRDLSMVHFSQDVPSAQRVNVAYES-GLVVSRDEARRTETDKARHLLDRRLLSLVLDLDHTLLHATDDPRAKAALI-----MDDQSPQT--PGTPMLSPAHHRGIHQLVLDGKSFFVKLRPGLGNFLRRMKKKFELHIYTMGTRPYADSIAAIIDPERTLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SRMPNLIKARPYHFFKGLHEAYDR 318          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A7S0ZJJ3_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJJ3_9RHOD)

HSP 1 Score: 235 bits (600), Expect = 9.730e-64
Identity = 136/345 (39.42%), Postives = 197/345 (57.10%), Query Frame = 0
Query:   22 WRLERWLVQPGARVHREQRIATF-----RSSSNAALEYAY-APRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGE-----------------------------------TAHSLHFAETKNTVE---RIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSR 322
            W+L +WLV P ++V   Q +A        S ++++L+    AP +G L+   ++    +    SP++ +EFCPH++++ G+CAVCGE                                   +   L   E K + +   R+ VAY   +L+VSR EAES S   A  ++  RRL LVLD+DHTLLHA  D+RA   I   P+ V  + + +F L A       +  M++K RP L +FL R+ SKFELHIYT G RAYA  +A ++DP  +LF GR+ SR+DF EG  +QK+++R+FPCDDSMVLIVDDREDVW  +   +++PNL+   PY F+ G++EVY R
Sbjct:   23 WKLAQWLVDPNSKVITGQSVAKIVFVPELSDNSSSLDMLVKAPHNGKLLTHLVKPQQHIHDMSSPISCVEFCPHAIIYAGLCAVCGEHDPVQLTQASTPARPPSLLLDTNTSAVNNSQTASQSQEKLSSTENKKSFKPQARVDVAYAGGELSVSRNEAESMSKRIASRMMRERRLFLVLDIDHTLLHAMCDSRAASAIPLLPEHVS-KDIHSF-LMAPDGFTAPAQTMYLKFRPSLMDFLNRMKSKFELHIYTNGRRAYANAVARVLDPQHELFRGRVVSRDDFPEGALSQKNLRRVFPCDDSMVLIVDDREDVWGQSV-DTYLPNLLLVTPYWFFRGVNEVYDR 364          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A7S0G191_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G191_9RHOD)

HSP 1 Score: 203 bits (517), Expect = 4.350e-57
Identity = 112/191 (58.64%), Postives = 132/191 (69.11%), Query Frame = 0
Query:  143 ARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVK---------AFHLGAATAHPN--NSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSR 322
            AR+LL+ R LSLVLDLDHTLLHATDD RA   +      +D QS K         A+H G    HP   +     VKLRP L  FL R+ +KFELHIYTMGTR+YA  IA IIDP +KLFG R+TSR+DF EG  NQK+++R+FPCDD+MVLIVDDREDVW+     S MPNLI+A PYHF+ GLHE Y R
Sbjct:    1 ARYLLDRRLLSLVLDLDHTLLHATDDPRAKAALM-----MDDQSPKTPGTPMLSPAYHKGI---HPLALDGQSFFVKLRPGLGNFLRRMKNKFELHIYTMGTRSYADSIAAIIDPERKLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRS-SKMPNLIKARPYHFFKGLHEAYDR 182          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A5J4YY12_PORPP (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY12_PORPP)

HSP 1 Score: 216 bits (549), Expect = 1.010e-55
Identity = 149/360 (41.39%), Postives = 184/360 (51.11%), Query Frame = 0
Query:   18 HPQQWRLERWLVQPGARVHREQRIATFRSS----------SNAALEYAYAPRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSL-----HFAETKNTV-----ERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARA--------------PEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWIS--ATGQSF-------------------MPNLIRAEPYHFWDGLHEVYSR 322
            H   W+L +W V  G  V     +A  R+           S   +E   A R G + + ++ +    D     LA IE+C H+V++ GIC  CGE            A T N       ER+ VAY  E L+V+  EA       AR +   RRL LVLDLDHTLLHA++D  A               + I   P   DI +     LG A         M+VKLRP LAEFL+R+  KFELHIYTMGTRAYA  IA IIDP KK F GRI SREDF EG  NQK+++R+FPCDDSMVLIVDDR+DVW +  A+ QS                    + NLI+A PY F+ GL E Y R
Sbjct:  206 HSAGWKLLKWFVVAGQSVSVGNVLARVRAQHHDRAAAPLPSTRVVELV-ATRKGVIKSLDVDEGQCFDDHACVLAAIEYCAHAVIYGGICTTCGEEQDDTKNRRRRMAATLNLTGGADGERLDVAYAGE-LSVTYKEAVEVGKKAARRMRSERRLYLVLDLDHTLLHASNDPNARAALGADDAPCGHKTDWIKQSPHASDIHTFPI--LGGAVQET-----MYVKLRPGLAEFLSRLVKKFELHIYTMGTRAYADAIARIIDPTKKFFQGRIVSREDFKEGALNQKNLRRVFPCDDSMVLIVDDRDDVWCADVASAQSTSRSSNVLGRSAQFKVPQEPIENLIQASPYAFFSGLEEAYDR 556          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A3M6UCD0_POCDA (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UCD0_POCDA)

HSP 1 Score: 214 bits (545), Expect = 6.240e-55
Identity = 205/733 (27.97%), Postives = 311/733 (42.43%), Query Frame = 0
Query:   23 RLERWLVQPGARVHREQRIATFRS---SSNAALEYAYAPRSGT----LVNTNLQQNCPVDPSLSPLARIEF--CPHSVVFKGICAVCGETAHSLHFAE---TKNTVERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYS----RAFTTYAVDPRGTPEAAAARANQQNETQLSNKLHASKPSQNGHEVKHTNGMVSHAETLRKRNEASGRPQSNREKACMWENGNRPIRTDIVAGVSNVHTSRHVSETEVVGVALNGISQTVDQKEQNGSSPHNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEKVKSEHKTVVRTQDQELQNGV--SEGK---ELKQSASSEGDSAQTNVSFRGVFTDLVHKWWKKETHP---KSSRHLLRLADVLEECHSRFF----SIADQARKECGAVRNGTSNKRFRAPA----DVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCS--------VEFENGCTTHLVASEERGR-NTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDE 714
            RL RW V PG+ V RE  +  F       + A  +   P+  +    +V   L     +  +  P+  I+   C H +V K +C  CG     L   +   +  T+  +P+ +   +L VS+ EAE+    +   LL++R+LSLV+DLD TL+H T        +   P   D++ V  F L      P+     H K+RP    FL  VSS FELHI+TMG+R YA  IA ++DP  KLF  RI SR++          ++ +FPC D+MV I+DDREDVW      +F  NLIR +PY F+ G+ ++ +     A  T   +P G P                           G+  + T       E+  + +   G  +  +  A   +NG    +      V+N  T       E + ++ +     ++  EQN S                       +K   +  E +  +  V  NG      G  +  K+ SE  T ++      +NG   ++GK   EL+Q  S    S  +    +G       K  +++ +        +LL L D+L   H  ++    S+  QA +E   V+N  +  ++  P     D K I+  +RR++LR   V FTGVIPT      S  W +A  LGA  S               TTH++A    GR  T K  RAV+S    VV+P WL  C   +EK DE
Sbjct:   18 RLLRWRVSPGSEV-REGSVLCFYEIIGDGDRAGSFITQPKLKSAFTGIVRELLVAEGEIVAASMPVLLIDEAECEHRMVMKDLCCDCGADLRKLREEQDEPSSPTLASVPLIHNIPELKVSQEEAEALGKKDEERLLQTRKLSLVVDLDQTLIHTT--------MELIPQ--DMEDVHHFQL------PDQHVWYHTKIRPGAVNFLNSVSSLFELHIFTMGSRMYAHTIARMLDPTGKLFAHRIRSRDECFNAFSKSHDLRAIFPCGDNMVCIIDDREDVW------NFAANLIRVKPYQFFKGVGDINAPLGGSALVTEDTNPFGNP---------------------------GNRSETTTDDAKIEESNSRDDNEGGVTEQKKNDAAFDDNGETERK------VANPETKEIQKLDEDMQISSDSSEPVIEDIEQNKS-----------------------EKITGEVVEEKGASSKVVENGG-----GDSASNKIVSEESTEIQKSSVNTRNGKQNADGKAENELEQRPSEGSVSPSSKTELKGEGDQTKIKKSRQQAYAFGDGDDDYLLHLEDILRRIHDVYYKTVESVQSQAPEE---VKNNPNILKYCTPGTSTPDTKMIMTELRRDVLRGANVVFTGVIPTSTIQEDSQPWRVARALGANVSNAIVTPKDTNSIGDVTTHVIA----GRLGTEKSYRAVKSRGIKVVNPGWLFCCFERWEKVDE 659          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A834F5E4_ORYME (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834F5E4_ORYME)

HSP 1 Score: 206 bits (525), Expect = 1.120e-52
Identity = 205/738 (27.78%), Postives = 311/738 (42.14%), Query Frame = 0
Query:   11 LPPRILEHPQQWRLERWLVQPGARVHREQRIATFRSSSNAALEYAYAP--------RSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSLHFA----ETKNTVERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSRAFTTYAVDPR--GTPEAAAARANQQNETQLSNKLHASKPSQNGHEVKHTNGMVSHAETLRKRNEAS--GRPQSNREKACMWENGNRPIRTDIVAGVSNVHTSRHVSETEVVGVA----LNGISQTVDQKEQNGSSPHNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEKVKSEHKTVVRTQDQELQNGVSEGKELKQSASSEGDSAQTNVSFRGVFTDLVHKWWKKETHPKSSRHLLRLADVLEECHSRFFSIADQ-ARKECGAVRNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCSVEF-----ENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDEFEYQLDRD 722
            LP R+LE         W V+PG+ V+ +  IA          E    P        R+G +     Q    + P    +ARIE C H +V KG+CA CG+    L       +T  +   + + +   +L VS  +AE     + + L  +R+L L++DLD TL+H T+         C      + +   FH       P     +H +LRPH  EFL + +  +ELH++T G+R YA  IA  +DP KKLF  RI SR++  +      +++ LFPC DSMV I+DDREDVW       F PNLI  + Y ++ G  ++ +   +  A+  R  G P   A  A Q    + +N L      Q           VS    L +  E        S  E   M E  N P R D   G       R V   +  G +    ++  S TV +K +   S       ++K L   +E            P   NP                 S +  KS   + V   D EL NG  E +E +  + +   S Q+ V+  G   D   +  ++E       HL+ L +VLE  H+ +++  +   RKE G +             D++KI+  ++ + L +  V F+G+ PT     ++  +  A+ LGA+ S        + G TTHL+A+      T K ++A       VV+P WL SC   +E+ DE  Y L  D
Sbjct:   30 LPLRLLE---------WKVKPGSLVNVDSVIALCAVVPREEAEEGVRPSEKKVKSDRAGVVKELCCQPGHIIPPG-GVIARIEECSHPIVMKGLCAECGQDLTQLQGTNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQ-------HC----QQMSNKGIFHFQLGRGEP----MLHTRLRPHCKEFLEKTAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRYLFPCGDSMVCIIDDREDVW------KFAPNLITVKKYVYFQGAGDINAPPGSREALAARKGGLPCRPAENAEQSGAEEQNNGLKKRAKEQKEDCASSQGAAVSERTPLTRIEEEDKVAHKGSEAEAGSMVEE-NEPQRED---GADMKDGGRTVEPQDAPGCSNHLDVSIYSDTVSEKTKKTQS-------ADKDLESSRE-------SEEQEPSDGNPPT---------------SRDMEKSSEPSGVVLPDPELGNGCLERREPETESQN---SEQSGVTM-GELLDQSMEDEEEEADNDHDDHLIYLEEVLERIHAEYYARYEAYLRKEAGQM------------PDIRKIVPELKSKTLEDATVVFSGLYPTNYPMDRTREYYHAKALGAKVSRNLVLNPQDPGRTTHLIAARA---GTEKVRQAQGYKHLHVVNPDWLWSCLERWERVDEQLYPLKDD 684          
BLAST of Gcaud2110.t1 vs. uniprot
Match: UPI001897AA5D (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001897AA5D)

HSP 1 Score: 199 bits (506), Expect = 7.810e-50
Identity = 200/760 (26.32%), Postives = 331/760 (43.55%), Query Frame = 0
Query:   11 LPPRILEHPQQWRLERWLVQPGARVHREQRIATFRSSSNAALEYAY--------APRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSLHFAETKNTVERIPVA-------YESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSRAFTTYAVDPRGTPEAAAARANQQNETQLSNKLHASKPSQNGHEV---KHTNGMVSHAETLRKRNEASGRPQSNREKACMWENGNRPIRTDIVAGVSNVHTSRHVSETEVVGVALN--------------GISQTVDQKEQNG-----SSPHNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEKVKS---EHKTVVRTQDQELQNGVSEGKELKQSASSEGDSAQTNVSFRGVFTD--LVHKWWKKETHPKSSRHLLRLADVLEECHSRFFSIADQARKECGAVRNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCSVEF-----ENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDEFEYQLDRDN 723
            LP R+LE         W V+PG+ V+ +  +A     +      A         + R+G +     Q    + P  S + RIE C H +V KG+CA CG+    L   +  N  +++P++       +   +L VS  +A+  +  + + L  +R+L L++DLD TL+H T+         C      + +   FH       P     +H +LRPH  EFL +++  +ELH++T G+R YA  IA  +DP KKLF  RI SR++  +      +++ LFPC DSMV I+DDREDVW       F PNLI  + Y+++ G  ++ +         P G+ EA  AR               S+P+++  +V   +H NG+   A+      E S  PQ ++ +     +      ++  AG     ++  + E++V GV  N                  +V  +E N      SS  + +  + KP +          + +    ERE      +    A E+  ++S E   S      + V   D EL NG  + +E +  + +   S Q+ V+  G   D  +  +            HL+ L +VLE  H+ +F     AR E   +R  TS        D+++I+  ++ + L   ++ F+G+ PT     ++  +  A+ LGA+          +   TTHL+A+      T K ++A       VVSP WL SC   +E+ +E  Y L  DN
Sbjct:   31 LPLRLLE---------WKVKPGSLVNVDSVLALCAPMAQEKRTEAVRLPERKVKSDRAGVVKELGCQVGQIISPG-SVIVRIEECSHPIVMKGLCAECGQDLTQL---QGTNGNQQVPISTATVSMVHSVPELMVSSEQAKQLAREDQQRLHRNRKLVLMVDLDQTLIHTTEQ-------HC----QRMSNKGIFHFQLGRGEP----MLHTRLRPHCKEFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVW------KFAPNLITVKKYNYFQGTGDINA---------PPGSQEAQTARKGGP----------LSRPAESTEQVGADEHNNGLRKKAKDCSVGKEESVIPQPSQVEPVTQSDTGHNHGSE--AGQKGSESAMELMESQV-GVETNIKEDXXXXXXXXXXXXXSSVPSRENNNLDFDLSSDSDNDSTTEKPRSLNSGGEGKSLQTKEPVVEREGQET--TDRDAAKEKDNNVSSEVENSCDVSEPSAVVPSDPELGNGCLDRREPETESQN---SEQSGVTVGGELLDQSMEDEXXXXXXXXXQDDHLIYLEEVLERIHTEYF-----ARYET-YLRKETSEM-----PDIRRIVPELKSKTLEGTMLMFSGLYPTNYPKERTREYYHAKALGAKVGKNLILNPQDPNRTTHLIAARA---GTEKVRQAQGCKHLNVVSPEWLWSCLERWERVEEQLYPLKEDN 715          
BLAST of Gcaud2110.t1 vs. uniprot
Match: A0A3P8W3Q2_CYNSE (RNA polymerase II subunit A C-terminal domain phosphatase n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8W3Q2_CYNSE)

HSP 1 Score: 198 bits (503), Expect = 4.320e-49
Identity = 201/767 (26.21%), Postives = 335/767 (43.68%), Query Frame = 0
Query:   11 LPPRILEHPQQWRLERWLVQPGARVHREQ------RIATFRSSSNAAL--EYAYAPRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVCGETAHSLHFAETKN----TVERIPVAYESEQLAVSRAEAESRSSVNARHLLESRRLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPNNSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKLFGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFMPNLIRAEPYHFWDGLHEVYSRAFTTYAVDPRGTPEAAAARANQQNETQLSNKLHASKPSQNGHEVKHTNGMVSHAET----LRKR---NEASGRPQSNREKACMWENGNRPIRTDIVAGVSNVHTSRHVSETEVVGVALNGISQTVD-----------QKEQNGSSPHNANHDSNK---PLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGSLSLEK-----VKSEHKTVVRTQD-----QELQNGVSEGKELKQSASSEGDSAQTNVSFRGVFTDLVHKWWKKETHPK------SSRHLLRLADVLEECHSRFFSIADQ-ARKECGAVRNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALWNLAERLGAQCSVEF-----ENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPSWLESCAFDFEKQDEFEYQLDRD 722
            LP R+LE         W V+PG+ ++ +        IA  + + NA L  +   + R+G +     Q    + P    + +IE C H VV KG+CA CG+    L  +        +   + + +   +L VS  +AE     +   L  +++L L++DLD TL+H T+         C      + +   FH       P     +H +LRPH   FL +++  FELH++T G+R YA  IA  +DP KKLF  RI SR++  +      +++ LFPC DSMV I+DDREDVW       F PNLI  + Y ++ G  ++ +         P G+ EA           Q++ K  A  PS    E   T G  + AE     LRK+   N  SG+ +S+   +   E  N    T    GV         S  E +  A  G++Q  D           Q+EQ  ++  +   DSN     L+ + +  +  +K  +   + EN +    + G   +   S+  E+     +K  +  +  + D      EL NG S+ +E       E +S  + +S   +  +L+ +  + +             HL+ L +VLE  H+ +F+  +   RKE   +             D+++I+  ++ + L++ ++ F+G+ PT     ++  +   + LGA+ S +      +  CTTHL+A+      T K ++A       VV+P WL SC   +E+ +E  Y L  D
Sbjct:   35 LPLRLLE---------WKVKPGSLINVDSVLALCVPIAQGKGAENARLPEKRVKSDRAGVVKELCCQLGQVIPPG-GVIVKIEECSHPVVMKGLCAECGQDLTQLQSSNRNKHAPISTATVSMVHSVPELMVSSEQAEQLGREDQHRLHRNKKLVLMVDLDQTLIHTTEQ-------HC----QRMSNKGIFHFQLGRGEP----MLHTRLRPHCKAFLEKIAKLFELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVW------KFAPNLITVKKYIYFQGTGDINA---------PPGSREA-----------QMTKK--AGGPSVRSAESTETAGTTAGAEEHNNGLRKKAKDNNISGKDESSISLSSQKEPANE--WTHASKGVEEESGQIKHSVNEALPEAGLGVTQEPDRTATEAANKKLQEEQEVTNSSSVRQDSNNLDFDLSSDSDSESFTEKPASSESDHENISCKEKTPGSEGDIHQSVDGEEAKVADIKENNSDITESSDVLLPDPELGNGCSDRRE------PETESQNSELSGVTMGEELLDQSMEDDXXXXXXSDIDQDDHLIYLEEVLERIHAEYFARYEAYLRKEAPEI------------PDIRRIVPELKGKTLQDTMIVFSGLYPTNYPIERTREFYHTKALGAKISKKLVLNSQDPNCTTHLIAARA---GTEKVRQAQGCKHLHVVNPDWLWSCLERWERVEEQLYPLKED 725          
The following BLAST results are available for this feature:
BLAST of Gcaud2110.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4T6_9FLOR1.340e-27853.99RNA polymerase II subunit A C-terminal domain phos... [more]
R7QQX4_CHOCR1.310e-9636.13Protein-serine/threonine phosphatase n=1 Tax=Chond... [more]
A0A7S3A5N5_9RHOD4.630e-7848.71RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0ZJJ3_9RHOD9.730e-6439.42RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0G191_9RHOD4.350e-5758.64RNA polymerase II subunit A C-terminal domain phos... [more]
A0A5J4YY12_PORPP1.010e-5541.39RNA polymerase II subunit A C-terminal domain phos... [more]
A0A3M6UCD0_POCDA6.240e-5527.97RNA polymerase II subunit A C-terminal domain phos... [more]
A0A834F5E4_ORYME1.120e-5227.78RNA polymerase II subunit A C-terminal domain phos... [more]
UPI001897AA5D7.810e-5026.32RNA polymerase II subunit A C-terminal domain phos... [more]
A0A3P8W3Q2_CYNSE4.320e-4926.21RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 624..709
e-value: 3.3E-4
score: 30.0
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 643..701
e-value: 6.2E-6
score: 26.1
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 622..719
score: 13.81254
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 150..315
e-value: 4.4E-34
score: 129.2
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 153..310
e-value: 1.8E-24
score: 86.2
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 147..331
score: 29.846954
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 142..306
e-value: 1.9E-53
score: 183.3
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 626..719
e-value: 4.4E-20
score: 73.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 626..720
IPR011947FCP1-like phosphatase, phosphatase domainTIGRFAMTIGR02250TIGR02250coord: 146..312
e-value: 7.4E-45
score: 150.9
NoneNo IPR availableGENE3D1.10.287.10coord: 307..346
e-value: 1.9E-53
score: 183.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..775
NoneNo IPR availablePANTHERPTHR23081:SF0RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEcoord: 77..722
NoneNo IPR availableCDDcd07521HAD_FCP1-likecoord: 151..292
e-value: 9.18653E-35
score: 126.941
NoneNo IPR availableCDDcd17729BRCT_CTDP1coord: 614..714
e-value: 1.88684E-34
score: 124.567
IPR039189CTD phosphatase Fcp1PANTHERPTHR23081RNA POLYMERASE II CTD PHOSPHATASEcoord: 77..722
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 145..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_112_length_49450_cov_4.312142contigNODE_112_length_49450_cov_4.312142:43030..45465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2110.t1Gcaud2110.t1Gracilaria caudata M_176_S67 malemRNANODE_112_length_49450_cov_4.312142 43030..45465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2110.t1 ID=Gcaud2110.t1|Name=Gcaud2110.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=812bp
MRGFKHQNVPLPPRILEHPQQWRLERWLVQPGARVHREQRIATFRSSSNA
ALEYAYAPRSGTLVNTNLQQNCPVDPSLSPLARIEFCPHSVVFKGICAVC
GETAHSLHFAETKNTVERIPVAYESEQLAVSRAEAESRSSVNARHLLESR
RLSLVLDLDHTLLHATDDARAPEIISCFPDGVDIQSVKAFHLGAATAHPN
NSARMHVKLRPHLAEFLTRVSSKFELHIYTMGTRAYAAKIADIIDPHKKL
FGGRITSREDFAEGRWNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSF
MPNLIRAEPYHFWDGLHEVYSRAFTTYAVDPRGTPEAAAARANQQNETQL
SNKLHASKPSQNGHEVKHTNGMVSHAETLRKRNEASGRPQSNREKACMWE
NGNRPIRTDIVAGVSNVHTSRHVSETEVVGVALNGISQTVDQKEQNGSSP
HNANHDSNKPLNKEKEPPAPDQKHRTDCPERENPTLLVSSNGVAAERVGS
LSLEKVKSEHKTVVRTQDQELQNGVSEGKELKQSASSEGDSAQTNVSFRG
VFTDLVHKWWKKETHPKSSRHLLRLADVLEECHSRFFSIADQARKECGAV
RNGTSNKRFRAPADVKKILANVRREILRECVVSFTGVIPTGVDPRKSALW
NLAERLGAQCSVEFENGCTTHLVASEERGRNTRKYKRAVESGSAFVVSPS
WLESCAFDFEKQDEFEYQLDRDNRFSTSEQLQSWIRSNFAKAETACRKRS
ALHIQDKQAGDDGHMPKRRRLDSPTASVRESGSRSPVADGAMLSILSQDE
IGAAIEAAFAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR004274FCP1_dom
IPR023214HAD_sf
IPR036420BRCT_dom_sf
IPR011947FCP1_euk
IPR039189Fcp1
IPR036412HAD-like_sf