Gcaud1730.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1730.t1
Unique NameGcaud1730.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length500
Homology
BLAST of Gcaud1730.t1 vs. uniprot
Match: A0A2V3J0G8_9FLOR (Tyrosine phosphatase type IVA A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0G8_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 3.740e-84
Identity = 145/206 (70.39%), Postives = 165/206 (80.10%), Query Frame = 0
Query:    1 MYGRKNSSYAPYTSRISGPLRALELAFEEVDSRKAEMYRRGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEK-QTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIRASQ 205
            MY RK S++   ++ IS PLRALELA+EEV+SRKAEMYRRGMLPD+PT VEHGP+RILISSSPS+ +L DYA LLRSYNVSHVVR CE  YSA+NL ALGF VHEMPFADGEAPS  VIS WL LLDKV  L+ H+R    SP +  L S  +  SS DS +EK + TVAVHCA GLGRAP+LAAIALVEAG+ PFEAVGSIRAS+
Sbjct:   13 MYSRKPSTHDSDSNPISSPLRALELAYEEVESRKAEMYRRGMLPDHPTFVEHGPVRILISSSPSEHNLADYASLLRSYNVSHVVRACEPTYSADNLAALGFQVHEMPFADGEAPSRNVISDWLSLLDKVCGLANHSRNTAVSPFANQLASHIEATSSCDSDSEKPKATVAVHCARGLGRAPILAAIALVEAGLDPFEAVGSIRASR 218          
BLAST of Gcaud1730.t1 vs. uniprot
Match: A0A7S0T5S2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5S2_9RHOD)

HSP 1 Score: 137 bits (346), Expect = 7.900e-34
Identity = 86/196 (43.88%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   12 YTSRISGPLRALELAFEEVDSRKAEMYRRGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCE----HMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIRA 203
            Y   +   +RALE A  E + R+ E  RRG+LP   T +EHG LR+L++ +P++  L +YA +LR + V HVVRVCE      Y A  L  LGF  H+M F+DG  PS ++I  WL LL+KV                AS  +  + G   DS   +  TVAVHC +GLGRA +LAAIALV+ GM  F+A+G IRA
Sbjct:    9 YQDAMQFQVRALE-ALSEANRRQEENIRRGLLPSRFTPLEHGKLRLLVTDAPTESELTNYAAVLRKHGVKHVVRVCEAESPSAYDAGKLSKLGFVHHQMFFSDGSPPSEDIIRAWLLLLEKVFG--------------ASATNNEEHGEECDS---EGVTVAVHCLSGLGRASLLAAIALVQYGMDAFDAIGYIRA 186          
BLAST of Gcaud1730.t1 vs. uniprot
Match: M2XLR1_GALSU (Protein-tyrosine phosphatase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XLR1_GALSU)

HSP 1 Score: 128 bits (321), Expect = 6.590e-30
Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 0
Query:   33 RKAEMYRRGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVS-------ALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIRA 203
            R AE +RRG+    PT VE G    LI+ SPSD+ L++Y   L+   V HVVR+CE +Y+AE L   GF  H+ PF DG  PS E+I +WL LL  V+        + +   +  +  SS +L  E + G +S  ++     +A+HC  GLGRAPV+ AIAL+E GM   +A+G IRA
Sbjct:   78 RNAETFRRGLASKQPTFVEFGRYVFLITGSPSDDCLNNYMDTLKRAGVKHVVRLCESLYNAEKLVDAGFKHHDWPFEDGGVPSGEIIQKWLSLLSCVTDNENTTKTMERAGFQGLNKSSSVALRKE-EVGDNSSKIS-----IALHCKTGLGRAPVMVAIALIEMGMDALDAIGYIRA 249          
BLAST of Gcaud1730.t1 vs. uniprot
Match: D3BIR6_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BIR6_POLPP)

HSP 1 Score: 119 bits (298), Expect = 5.010e-28
Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 0
Query:   40 RGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            R  LP+  +LVE    R LI  +P+D++L  Y   LR YN+SH+VR C+  YS E L+++G  VH+MPF DG APS  V+  WL +L       K + K                        + + TV VHC AGLGRAPVL AIAL+E GM+P +AV  IR
Sbjct:    5 RSTLPNPASLVESSTHRFLIFDAPNDDNLQLYINELRKYNISHLVRACDPTYSTEPLQSIGIQVHDMPFPDGGAPSDSVVENWLKIL-------KDSYKK-----------------------DGKETVGVHCVAGLGRAPVLVAIALIEGGMNPLQAVEYIR 137          
BLAST of Gcaud1730.t1 vs. uniprot
Match: TP4AA_DICDI (Probable protein tyrosine phosphatase type IVA A n=2 Tax=Dictyostelium TaxID=5782 RepID=TP4AA_DICDI)

HSP 1 Score: 116 bits (291), Expect = 4.830e-27
Identity = 67/163 (41.10%), Postives = 90/163 (55.21%), Query Frame = 0
Query:   40 RGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            R  LP+  +LVE    R LI  +P+D++L  Y   L+ YNVSH+VR C+  YS E L+A+G  VH+MPFADG +P   V++ W+ +L                           E    DS    + T+ +HC AGLGRAPVL AIAL+E GM+P +AV  IR
Sbjct:    5 RSALPNPASLVESSTHRFLIFDAPNDDNLPLYINELKKYNVSHLVRACDPTYSTEPLQAIGIQVHDMPFADGGSPPDAVVNNWIKILG--------------------------ESYKKDS----KETIGIHCVAGLGRAPVLVAIALIEGGMNPLQAVEYIR 137          
BLAST of Gcaud1730.t1 vs. uniprot
Match: UPI000644AED0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AED0)

HSP 1 Score: 114 bits (285), Expect = 3.350e-26
Identity = 68/163 (41.72%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   40 RGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            R  LP+  +LVE    R LI  +P+D++L  Y   L+ Y V+H+VR C+  YS E L+++G  VH+MPF DG APS  V+  WL +L +                             S +  +KQT V VHC AGLGRAPVL AIAL+E+GM+P +AV  IR
Sbjct:    5 RSTLPNPASLVESTTHRFLIFDAPNDDNLPLYINELKKYGVTHLVRACDPTYSTEPLQSVGIQVHDMPFPDGGAPSDSVVDNWLRILKE-----------------------------SYNKDDKQT-VGVHCVAGLGRAPVLVAIALIESGMNPLQAVEYIR 137          
BLAST of Gcaud1730.t1 vs. uniprot
Match: F4P0M7_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P0M7_BATDJ)

HSP 1 Score: 114 bits (285), Expect = 8.610e-26
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 0
Query:   43 LPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            L + PTL+E   LR L+  +PSD  +D Y K  +++NV+ VVRVC+  Y    LE +G  VH+ PF DGEAPS  ++  WL L+  +   SK  +K+  SPS + L                 + + VHC AGLGRAPVL A+AL+EAGM+P ++V  IR
Sbjct:   30 LANQPTLIEFKHLRFLVFDAPSDRIIDLYIKEFQNHNVTDVVRVCDSTYDRGALEKVGIKVHDWPFPDGEAPSDSIVHAWLNLV--MQRFSKD-KKDDKSPSPSPL---------------DLSCIGVHCVAGLGRAPVLVAMALIEAGMAPLDSVIYIR 171          
BLAST of Gcaud1730.t1 vs. uniprot
Match: A0A507DX12_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DX12_9FUNG)

HSP 1 Score: 113 bits (283), Expect = 1.630e-25
Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 0
Query:   43 LPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            +P+ P  VE+  LR LI  +PSD +LD Y   L  YNV+ VVRVC+  Y  E L   G  VH+ PF DG+ P + V++ +L L++      K A+                  +S++ V E+++T+ VHC AGLGRAPVL  +AL+EAG++P +AV  +R
Sbjct:   28 MPNPPAFVEYKNLRFLIFDAPSDRTLDLYLNELDKYNVTDVVRVCDPTYDKETLAKKGMTVHDWPFPDGDPPPNHVVAEFLNLVNARFGKPKTAKS-----------------ASTEQVVEQKSTIGVHCVAGLGRAPVLVTMALIEAGLAPLDAVIYVR 170          
BLAST of Gcaud1730.t1 vs. uniprot
Match: A0A8J4PR60_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PR60_9MYCE)

HSP 1 Score: 112 bits (279), Expect = 2.310e-25
Identity = 63/163 (38.65%), Postives = 89/163 (54.60%), Query Frame = 0
Query:   40 RGMLPDYPTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            R  LP+  +LVE    + LI  +P+D++L  Y   L+ YN+SH+VR C+  YS E+L A+G  VH+MPF DG  P+  V++ WL +L +                                  + + T+ VHC AGLGRAPVL AIAL+E+GM+P +AV  IR
Sbjct:    5 RSALPNPASLVESPTHKFLIFDAPNDDNLPLYINELKKYNISHLVRACDPTYSTESLSAIGIQVHDMPFPDGGFPTELVVNSWLKILGE------------------------------SYKKDHKETIGVHCVAGLGRAPVLVAIALIESGMNPLQAVEYIR 137          
BLAST of Gcaud1730.t1 vs. uniprot
Match: A0A397W5B3_9GLOM (Protein-tyrosine phosphatase-like protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397W5B3_9GLOM)

HSP 1 Score: 111 bits (277), Expect = 4.510e-25
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 0
Query:   47 PTLVEHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALGFHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVSEFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGSIR 202
            PTL+EH  LR LI+ +PSD +L  Y +    +NV+ VVRVC+  Y  E LE  G  VH+  F DGEAP +++++ WL L+ K                       F E  S     E++ T+A HC AGLGRAPVL AIAL+E+GMS  +A+  IR
Sbjct:    8 PTLIEHKNLRFLIADAPSDNNLSLYIQEFERFNVTDVVRVCDPTYHIEALEERGVKVHDWVFGDGEAPPTQIVNDWLDLVQK----------------------RFSEIVSD----EEKPTIACHCVAGLGRAPVLVAIALIESGMSALDAIVYIR 137          
The following BLAST results are available for this feature:
BLAST of Gcaud1730.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0G8_9FLOR3.740e-8470.39Tyrosine phosphatase type IVA A n=1 Tax=Gracilario... [more]
A0A7S0T5S2_9RHOD7.900e-3443.88Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
M2XLR1_GALSU6.590e-3042.13Protein-tyrosine phosphatase n=1 Tax=Galdieria sul... [more]
D3BIR6_POLPP5.010e-2842.33Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
TP4AA_DICDI4.830e-2741.10Probable protein tyrosine phosphatase type IVA A n... [more]
UPI000644AED03.350e-2641.72hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4P0M7_BATDJ8.610e-2642.50Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
A0A507DX12_9FUNG1.630e-2540.00Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A8J4PR60_9MYCE2.310e-2538.65Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A397W5B3_9GLOM4.510e-2542.31Protein-tyrosine phosphatase-like protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 45..211
e-value: 2.2E-32
score: 114.2
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 53..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..309
NoneNo IPR availablePANTHERPTHR23339TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASEcoord: 27..430
IPR000387Tyrosine-specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 146..205
score: 11.633679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1010_length_15078_cov_4.529993contigNODE_1010_length_15078_cov_4.529993:6167..8371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1730.t1Gcaud1730.t1Gracilaria caudata M_176_S67 malemRNANODE_1010_length_15078_cov_4.529993 6167..8371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1730.t1 ID=Gcaud1730.t1|Name=Gcaud1730.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=500bp
MYGRKNSSYAPYTSRISGPLRALELAFEEVDSRKAEMYRRGMLPDYPTLV
EHGPLRILISSSPSDESLDDYAKLLRSYNVSHVVRVCEHMYSAENLEALG
FHVHEMPFADGEAPSSEVISRWLCLLDKVSALSKHARKNQSSPSSASLVS
EFDEGSSSDSVTEKQTTVAVHCAAGLGRAPVLAAIALVEAGMSPFEAVGS
IRASQCVQDGVMSACGAFDTASLQRIYDCLESRREKYFDEDGNVVDVTEA
KPEHSNDLEFYVLDKRLDWYLYPAEFYRESSYNTQGNGSGNAMGQMKPQG
LQSTAPSATPIPFCGKNEVLANAATAGEHYGTSHSSSGVGAAPCAANDQV
SGPVRTTKSSPRESERTKSPPNAQRKSSTSFSSCEERGKVLHELESSEKA
EPEPLHSRTSSPGDSMKPKSPLNVQGHSSTSSSSTEVREEGLHERESREK
AEPVLEVEKRSQGNEIREQSQAISFKSELTFHTLCSNLEIGSFPASFQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR000387Tyr_Pase_dom