Gcaud2506.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2506.t2
Unique NameGcaud2506.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length456
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2506.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..391
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 392..455
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..368
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..73
NoneNo IPR availableTMHMMTMhelixcoord: 369..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_441_length_25217_cov_4.561570contigNODE_441_length_25217_cov_4.561570:10256..11623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2506.t2Gcaud2506.t2Gracilaria caudata M_176_S67 malemRNANODE_441_length_25217_cov_4.561570 10256..11623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2506.t2 ID=Gcaud2506.t2|Name=Gcaud2506.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=456bp
MVTRRIFTGKLVRISDDSMSVEDIVPRAIKLIRTARNRKSTSRGNVSTGL
SRQCVTLMISLIMSVGILLLSVFTDGKTVPTYETRDLFIWNNATFVDSTR
STGLDSRAGDVLGMAGVRRACINRTDADSFNMYAVGFFDIQNFEQGRSAN
GSVCLDGEQTKERQGISLSTNRIFNPPADPVYKEDMEGEPAQFTFIRSID
RTGTPDYCRVLVTTEKSSEVWTLSSEYRSERTRFAVRAVRNESNVIIVKI
GVAYHFLNNDEIESELPQEFEDCDAISTTMFASNRFTAEITEIDVTLNLT
HVELTVADMLSLIVESGYGRLESQEIMLRAYYAGTRDSEEDSGEPLGTFI
RRQVAVATGGQQVTELSTLAIVGAILTAFGTVLLLGVAICFRPQVRLTSS
TYVSQLYVNNASENGQSSVKDCDYVEAVDGHGTKKRVRPLSLGYNTVEVY
ESDFT*
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