Gcaud3499.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3499.t1
Unique NameGcaud3499.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length328
Homology
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BLAST of Gcaud3499.t1 vs. uniprot
Match: A0A2V3II30_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II30_9FLOR)

HSP 1 Score: 422 bits (1084), Expect = 6.440e-146
Identity = 211/299 (70.57%), Postives = 244/299 (81.61%), Query Frame = 0 
Query:   33 MRRVPRVSVSNVLLLLPIVLLLVFAVHVKNSDSFRALARVEPPP----NERVHRPIFYLKMHKTASTTIAKALDRYARRHGLSISRASGRQYITKPNRSSARFDVIALQHMPYNLELLDTFLNARPNLVLSSVRHPTDRAVSWFRQQITKFERVSQRDCPKKEKAILKEFDKFVDKGRQQASQFFQLQERTARLALRPKKMNVTQVVSQFDFIFSQERLQDSFECFCKTHGVHLCDAKHPVKKENAKKKRSCVHHVLMQHRPNVLTKGYEQDLQVLEWVRQQLDECVKDIPNYCRCNSS 327
            MRR+ RV +S VL+LL I+ LLVFA  ++NSD+ R  +           ERVHRPIFYLKMHKTASTTI++AL  YA RHGLSIS ASG +YI +PN +S R+D+IALQHM +N E+LDTFL  RPNL+L+S+RHPTDRAVSWFRQQI KFER+S RDC KKEK IL EFDKFVD+GR QASQFFQ+QERTARLAL P+KMN+TQ+V QF FIF QERL DSFECFCK HGV LCDA +PVK ENAKK R CV H+LMQHRPNVLTKGYEQD+QV+ WVR+QLD+CVKDIP +CRC  S
Sbjct:    1 MRRIGRVPISTVLMLLLILSLLVFAYQLRNSDAIRPASXXXXXXXXXXEERVHRPIFYLKMHKTASTTISRALKLYAGRHGLSISTASGLRYIIEPNPTSNRYDIIALQHMAFNFEILDTFLTERPNLILTSIRHPTDRAVSWFRQQIPKFERISDRDCQKKEKQILDEFDKFVDQGRLQASQFFQMQERTARLALHPRKMNLTQIVDQFHFIFLQERLTDSFECFCKQHGVFLCDANNPVKYENAKKSRGCVQHMLMQHRPNVLTKGYEQDVQVMNWVREQLDQCVKDIPEHCRCMRS 299
The following BLAST results are available for this feature:
BLAST of Gcaud3499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II30_9FLOR6.440e-14670.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 80..322
e-value: 2.1E-16
score: 62.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 80..176
IPR009729Galactose-3-O-sulfotransferasePFAMPF06990Gal-3-0_sulfotrcoord: 31..209
e-value: 4.4E-9
score: 35.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availableTMHMMTMhelixcoord: 41..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_436_length_25374_cov_4.383380contigNODE_436_length_25374_cov_4.383380:22227..23483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3499.t1Gcaud3499.t1Gracilaria caudata M_176_S67 malemRNANODE_436_length_25374_cov_4.383380 22227..23483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3499.t1 ID=Gcaud3499.t1|Name=Gcaud3499.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=328bp
LTAYSACTDVERYVASLPRPGTKPVLSLSHRTMRRVPRVSVSNVLLLLPI
VLLLVFAVHVKNSDSFRALARVEPPPNERVHRPIFYLKMHKTASTTIAKA
LDRYARRHGLSISRASGRQYITKPNRSSARFDVIALQHMPYNLELLDTFL
NARPNLVLSSVRHPTDRAVSWFRQQITKFERVSQRDCPKKEKAILKEFDK
FVDKGRQQASQFFQLQERTARLALRPKKMNVTQVVSQFDFIFSQERLQDS
FECFCKTHGVHLCDAKHPVKKENAKKKRSCVHHVLMQHRPNVLTKGYEQD
LQVLEWVRQQLDECVKDIPNYCRCNSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR009729Gal-3-0_sulfotransfrase