Gcaud2103.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2103.t1
Unique NameGcaud2103.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length257
Homology
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A2V3J3Y6_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y6_9FLOR)

HSP 1 Score: 324 bits (831), Expect = 2.690e-109
Identity = 162/225 (72.00%), Postives = 184/225 (81.78%), Query Frame = 0
Query:   32 VNDPYEVDYYLPPPPRSPFRLRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHANQFGSSESSAKSSXXXXXXRLSQTQDNPNFCTVQ 256
            V DPY+++ YLPPP R+PF +RKRIAVLGAR VGKSAVAIQC  +RFEPEYMPTCED+FLWTTVVDG  YEVTIVDTDGQDEFPDFG QYTIG+DGYILMFS++NENSF+IIKRVHEKLL+TL VLNRKGT ELPRILVGNQ+D  H RRVSR+ AQ FADEN IPYYETSA T ENV +VFVR+LRII+AN     + +            S++ D PNFC+VQ
Sbjct:   32 VRDPYDLNCYLPPPSRTPFYVRKRIAVLGARAVGKSAVAIQCAYNRFEPEYMPTCEDAFLWTTVVDGTNYEVTIVDTDGQDEFPDFGHQYTIGVDGYILMFSLVNENSFYIIKRVHEKLLETLIVLNRKGTKELPRILVGNQLDVAHKRRVSRQAAQQFADENDIPYYETSAYTAENVREVFVRMLRIINANLLDLHKPAVPQIHSSLRHTQSES-DRPNFCSVQ 255          
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A2V3IJT9_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT9_9FLOR)

HSP 1 Score: 322 bits (825), Expect = 2.360e-108
Identity = 160/226 (70.80%), Postives = 183/226 (80.97%), Query Frame = 0
Query:   32 VNDPYEVDYYLPPPPRSPFRLRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHANQFGSSESSAKSSXXXXXXRLSQTQDN-PNFCTVQ 256
            V DPY+V  YLPPP + PFR+RKRIAVLGAR VGKSAVAIQCT +RFEPEYMPTCED+FLWTT VDG  YEVTIVDTDGQDEFPDFG+QYTIG+DGYILMFS+++E+SFHII+RVHEKLL TL VL+ KGT ELPRILVGNQ+D  H RRVSR+VAQ+FADE+ IPYYETSA TGENV +VF  LLRII+ N   S + S          R S T  N PN+C++Q
Sbjct:   32 VRDPYDVRCYLPPPSQKPFRVRKRIAVLGARAVGKSAVAIQCTDNRFEPEYMPTCEDAFLWTTTVDGTKYEVTIVDTDGQDEFPDFGEQYTIGVDGYILMFSLVDESSFHIIRRVHEKLLQTLVVLDPKGTAELPRILVGNQLDMAHTRRVSRQVAQEFADEHGIPYYETSAYTGENVNEVFATLLRIINTNLVNSHKPSENELRPSCEQRESTTTANAPNYCSIQ 257          
BLAST of Gcaud2103.t1 vs. uniprot
Match: R7QRP1_CHOCR (Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP1_CHOCR)

HSP 1 Score: 191 bits (486), Expect = 4.890e-57
Identity = 96/181 (53.04%), Postives = 128/181 (70.72%), Query Frame = 0
Query:   43 PPPPRSPFRLRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHAN 223
            P P   PF + KRIAVLGARGVGKSA++I+   +RFEP YM T +D + W  VV+   Y+V+I+DTDGQDE  +FG +YT G+D Y+L+FSV +E+S+ +IK+V+EKLL TL V  R GT+E+PR+LVGNQ+D  H R+V  + A  FA    IPY ETSA T +NV + F  +L +I  N
Sbjct:   35 PDPDDEPFYVFKRIAVLGARGVGKSALSIRVAQNRFEPNYMLTFQDMYQWRPVVNSVQYDVSILDTDGQDENSEFGMRYTTGVDAYVLVFSVRDESSYEVIKQVNEKLLVTLNVTERVGTSEVPRVLVGNQIDIAHQRQVPSQEAAKFASNEGIPYLETSAFTSQNVNEAFDSVLCMIQQN 215          
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A5J4YYB2_PORPP (GTP-binding protein Rheb-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB2_PORPP)

HSP 1 Score: 140 bits (354), Expect = 7.330e-38
Identity = 74/181 (40.88%), Postives = 111/181 (61.33%), Query Frame = 0
Query:   54 KRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARR-VSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHANQFGSSESSAK 233
            +RIAVLGARGVGK++++ +   + F+  Y+PT EDS+  T  ++   Y   ++DT GQDE+  FG Q TIG+ G+ L+FSV +  SF ++K +++KLL TL      G + +PR+LVGNQ D     R VS    + +A E   P+ E SA++GENV + FV L+R++    F    +  K
Sbjct:   21 RRIAVLGARGVGKTSMSTRFCENTFDDMYLPTIEDSYQATIRINNQQYICEVLDTAGQDEYSIFGTQLTIGVHGFFLVFSVRDRTSFELLKTINDKLLVTL------GASSIPRVLVGNQSDSIETEREVSYAEGESYAREIGCPFVECSAMSGENVTEAFVTLIRVMDPQSFKEQNTKRK 195          
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A7S2ZWW8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWW8_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 8.160e-37
Identity = 76/168 (45.24%), Postives = 108/168 (64.29%), Query Frame = 0
Query:   51 RLRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLR 218
            +LRK +AV+G + VGKS++ ++   + FE  Y PT ED FL +T VDG  +   ++D+ GQD+   +G Q TIGI GY+++FSV +  +F +I+ V++ LL +L       T E+PR+LVGNQ+D    R+VS   AQ  A E  IPY E SAL+GE + DVF  LLR
Sbjct:   21 KLRK-LAVIGPKCVGKSSIILRFIENTFEEGYTPTIEDLFLVSTNVDGTAFNCELLDSAGQDDVSTYGAQLTIGIRGYLIVFSVRDRETFDLIRPVNQNLLVSL---GGPATHEVPRVLVGNQIDAAGERKVSTEEAQALARELRIPYMECSALSGEGIQDVFHSLLR 184          
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A7J7IRH7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRH7_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 4.090e-32
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   54 KRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVV-DGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLL 217
            +RIAVLGARGVGKSA+ I+     F   Y+PT ED++  T    D   Y + IVDT GQDE+   G Q TIGIDGY+L++SV + +SF +I+ ++++L+ TL      G  ++P+ILVGNQ+DE+  R V        A+     + E SA TG NV +VF  LL
Sbjct:   49 RRIAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQATLRGHDDEVYALEIVDTAGQDEYSSLGAQVTIGIDGYVLLYSVRDASSFEMIRYIYQRLVATL------GGDQIPKILVGNQIDESLDREVDYEEGIQVAESIGAAFCECSARTGTNVVEVFRILL 207          
BLAST of Gcaud2103.t1 vs. uniprot
Match: M2XVP6_GALSU (Small GTP-binding protein of Ras family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVP6_GALSU)

HSP 1 Score: 125 bits (315), Expect = 4.950e-32
Identity = 69/182 (37.91%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   54 KRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHANQFGSSESSAKSS 235
            +R+A+LGA+GVGKS++A +   D F   Y+PT EDS+  T       Y + I+DT GQDE+   G Q TIG+DGY  ++S+ +  SF ++   H  L + L      GT  +P+ILVGN +D    R VS    +  A++   P+ E SA +G+NV  VF  LL  +    F  S     +S
Sbjct:   20 RRVALLGAKGVGKSSIATRFAEDTFLESYLPTIEDSYHATCKHRNETYNLEILDTGGQDEYSYLGTQLTIGVDGYAFVYSICDGGSFDMVPVAHRLLAEAL------GTNNVPKILVGNLLDSADKREVSVEEGKSLAEKLNCPFVECSAKSGQNVSKVFTLLLAEVEGMYFQRSSIEIPTS 195          
BLAST of Gcaud2103.t1 vs. uniprot
Match: M1UXT7_CYAM1 (Small GTP-binding protein of Ras family n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXT7_CYAM1)

HSP 1 Score: 128 bits (322), Expect = 8.880e-32
Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   54 KRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVV-DGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLL 217
            +RIAVLGARGVGKSA+ I+     F   Y+PT ED++  T    DG  Y + IVDT GQDE+   G Q TIGIDGY+L++SV + +SF +++ + ++L+  L      G+ ++P ILVGNQ+D+   R VS       A+     + E SA TG NV +VF  LL
Sbjct:   49 RRIAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQTTLRGRDGTVYALEIVDTAGQDEYSSLGAQATIGIDGYVLLYSVRDASSFEMVRYIFQRLVAIL------GSDQIPMILVGNQIDQALDREVSFEEGAHIAETIGAAFCECSARTGTNVAEVFRILL 207          
BLAST of Gcaud2103.t1 vs. uniprot
Match: A0A0L0DPX9_THETB (Psmras1 n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DPX9_THETB)

HSP 1 Score: 127 bits (318), Expect = 1.900e-31
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 0
Query:   52 LRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVRLLRIIHAN 223
            L  +I +LGA GVGKSA+ +Q  ++ F  +Y PT EDSFL    VDG    ++I+DT GQ+E+     QY    +G++L+F + +  SF  +K+VH K+    E ++       P +LVGN+VD    R+V +  A+  A +   PY+E SALT ENV +VF  + RI+ AN
Sbjct:  117 LTYKIVMLGAGGVGKSALTLQFVNNMFLADYEPTIEDSFLKQLTVDGQSCRLSILDTAGQEEYTTITDQYIEVGEGFVLVFDITSAASFEDVKKVHSKVRRVTEAMDDLP----PMVLVGNKVDLVDLRQVEKETAESLAAQFGCPYFEASALTRENVENVFHEITRIMRAN 284          
BLAST of Gcaud2103.t1 vs. uniprot
Match: UPI000C75C7D2 (GTP-binding protein Rheb homolog n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75C7D2)

HSP 1 Score: 122 bits (307), Expect = 4.320e-31
Identity = 66/181 (36.46%), Postives = 109/181 (60.22%), Query Frame = 0
Query:   53 RKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKLLDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYETSALTGENVPDVFVR-LLRIIHANQFGSSESSA 232
            +++IAV+G+R VGKS++AIQ    +F   Y PT E++F       G  YEV +VDT GQDE+  F  QY++ IDGYIL++S+ +E SF +++ +++KL+D +      G   +P +LVGN+ D  + RR+++   +  A +    + ETSA   +   D+F++ L++I  A   G  E  +
Sbjct:    5 QRKIAVMGSRSVGKSSLAIQFVQGQFVDSYDPTIENTFTKVLKYRGQEYEVLVVDTAGQDEYSIFPTQYSVDIDGYILVYSIDSEKSFEVVQIIYDKLVDLV------GNANVPLVLVGNKNDLHNDRRITQEAGKKLAGDMKAMFLETSAKDNQCASDIFIKSLIQIEKAEGSGVEEKKS 179          
The following BLAST results are available for this feature:
BLAST of Gcaud2103.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Y6_9FLOR2.690e-10972.00GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3IJT9_9FLOR2.360e-10870.80GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
R7QRP1_CHOCR4.890e-5753.04Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A5J4YYB2_PORPP7.330e-3840.88GTP-binding protein Rheb-like n=1 Tax=Porphyridium... [more]
A0A7S2ZWW8_9RHOD8.160e-3745.24Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IRH7_9RHOD4.090e-3244.85Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2XVP6_GALSU4.950e-3237.91Small GTP-binding protein of Ras family n=1 Tax=Ga... [more]
M1UXT7_CYAM18.880e-3244.24Small GTP-binding protein of Ras family n=1 Tax=Cy... [more]
A0A0L0DPX9_THETB1.900e-3140.12Psmras1 n=2 Tax=Thecamonas trahens ATCC 50062 TaxI... [more]
UPI000C75C7D24.320e-3136.46GTP-binding protein Rheb homolog n=1 Tax=Eurytemor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 94..116
score: 30.88
coord: 198..220
score: 39.6
coord: 163..176
score: 37.97
coord: 54..75
score: 32.33
coord: 77..93
score: 28.63
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 55..223
e-value: 1.2E-11
score: 35.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 50..223
e-value: 5.5E-44
score: 162.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..256
NoneNo IPR availablePROSITEPS51419RABcoord: 37..256
score: 17.029528
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 56..223
e-value: 3.9E-5
score: -51.7
IPR001806Small GTPasePFAMPF00071Rascoord: 56..220
e-value: 2.0E-35
score: 121.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 48..256
score: 17.781582
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 49..227
e-value: 4.4E-45
score: 155.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 54..236
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 54..213
e-value: 1.2E-18
score: 65.3
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 55..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_112_length_49450_cov_4.312142contigNODE_112_length_49450_cov_4.312142:25656..26426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2103.t1Gcaud2103.t1Gracilaria caudata M_176_S67 malemRNANODE_112_length_49450_cov_4.312142 25656..26426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2103.t1 ID=Gcaud2103.t1|Name=Gcaud2103.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bp
MSNVELSNHEAPPPPVPHLAAQALSPPPSLTVNDPYEVDYYLPPPPRSPF
RLRKRIAVLGARGVGKSAVAIQCTSDRFEPEYMPTCEDSFLWTTVVDGNC
YEVTIVDTDGQDEFPDFGQQYTIGIDGYILMFSVLNENSFHIIKRVHEKL
LDTLEVLNRKGTTELPRILVGNQVDETHARRVSRRVAQDFADENAIPYYE
TSALTGENVPDVFVRLLRIIHANQFGSSESSAKSSKSKSKSRLSQTQDNP
NFCTVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras-type