Gcaud1729.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1729.t1
Unique NameGcaud1729.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length101
Homology
BLAST of Gcaud1729.t1 vs. uniprot
Match: R7QLY2_CHOCR (Ubiquitin-fold modifier 1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QLY2_CHOCR)

HSP 1 Score: 166 bits (421), Expect = 6.010e-52
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0
Query:   12 MTDSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVG 97
            M DSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVP+ATSAIITNDGVGINPQQSAGNVFLKHG+ELRLIPRDRVG
Sbjct:    1 MADSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPSATSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 86          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A7S0ZB04_9RHOD (Ubiquitin-fold modifier 1 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB04_9RHOD)

HSP 1 Score: 156 bits (395), Expect = 8.000e-48
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0
Query:   16 GKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGSH 99
            GKV+FKI LTSDPKLPF+VVNVPE APFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHG+ELRLIPRDRVG +
Sbjct:   12 GKVSFKITLTSDPKLPFRVVNVPENAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGCY 95          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A7M7RCD7_STRPU (Ubiquitin-fold modifier 1 n=6 Tax=Deuterostomia TaxID=33511 RepID=A0A7M7RCD7_STRPU)

HSP 1 Score: 155 bits (391), Expect = 2.200e-47
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0
Query:   15 SGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGSHI 100
            + KVTFKI LTSDPKLPFKV++VPE  PFTAVLKFAAEEFRVPAATSAIITNDG+GINP QSAGNVFLKHG+ELRLIPRDRVGSH+
Sbjct:    2 ASKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFRVPAATSAIITNDGIGINPAQSAGNVFLKHGSELRLIPRDRVGSHL 87          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A7M7HP38_STRPU (Ubiquitin-fold modifier 1 n=5 Tax=Deuterostomia TaxID=33511 RepID=A0A7M7HP38_STRPU)

HSP 1 Score: 154 bits (390), Expect = 3.520e-47
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 0
Query:   17 KVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGSHI 100
            KVTFKI LTSDPKLPFKV++VPE  PFTAVLKFAAEEFRVPAATSAIITNDG+GINP QSAGNVFLKHG+ELRLIPRDRVGSH+
Sbjct:    8 KVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFRVPAATSAIITNDGIGINPAQSAGNVFLKHGSELRLIPRDRVGSHL 91          
BLAST of Gcaud1729.t1 vs. uniprot
Match: T0R064_SAPDV (Ubiquitin-fold modifier 1 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R064_SAPDV)

HSP 1 Score: 152 bits (385), Expect = 1.810e-46
Identity = 73/84 (86.90%), Postives = 80/84 (95.24%), Query Frame = 0
Query:   15 SGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            SGKVTFKI LTSDPKLPF++V+VPE+APFTAVLK+ AEEFRVPAATSAIITNDG+GINP Q+AGNVFLKHGTELRLIPRDRVG 
Sbjct:    2 SGKVTFKITLTSDPKLPFRIVSVPEEAPFTAVLKYVAEEFRVPAATSAIITNDGIGINPSQTAGNVFLKHGTELRLIPRDRVGG 85          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A7S2V671_9STRA (Ubiquitin-fold modifier 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V671_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.720e-46
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    9 IAKMTDSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            I KM +  KVTFK+ LTSDP+LP++VVNVPE APFTAVLK+ AEEFRVPAATSAIITNDGVGINP QSAGNVFLKHG+ELRLIPRDRVG 
Sbjct:   32 IFKMAEQAKVTFKVTLTSDPRLPYRVVNVPEAAPFTAVLKYVAEEFRVPAATSAIITNDGVGINPSQSAGNVFLKHGSELRLIPRDRVGG 121          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A044V5U5_ONCVO (Ubiquitin-fold modifier 1 n=4 Tax=Onchocercidae TaxID=6296 RepID=A0A044V5U5_ONCVO)

HSP 1 Score: 151 bits (382), Expect = 6.400e-46
Identity = 73/83 (87.95%), Postives = 79/83 (95.18%), Query Frame = 0
Query:   16 GKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            GKVTFKI LTSDPKLPFKV++VPE  PFTAVLKFAAEEF+VPAATSAIITNDGVG+NP QSAGN+FLKHG+ELRLIPRDRVGS
Sbjct:   11 GKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGVNPAQSAGNIFLKHGSELRLIPRDRVGS 93          
BLAST of Gcaud1729.t1 vs. uniprot
Match: UPI0007EF4316 (ubiquitin-fold modifier 1 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF4316)

HSP 1 Score: 151 bits (381), Expect = 9.090e-46
Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = 0
Query:   14 DSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            D GKV+FK++LTSDPKLPFKV +VPE APFTAVLKFAAEEF+VP  TSAIITNDGVGINPQQSAGNVFLKHG+ELRLIPRDRVG+
Sbjct:    5 DGGKVSFKVILTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 89          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A0N4XXI4_NIPBR (Ubiquitin-fold modifier 1 n=5 Tax=Strongylida TaxID=6308 RepID=A0A0N4XXI4_NIPBR)

HSP 1 Score: 151 bits (381), Expect = 9.650e-46
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 0
Query:   10 AKMTDSG-KVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            A +T SG KVTFKI LTSDPKLPFKV++VPE  PFTAVLKFAAEEF+VPAATSAIITNDGVGINP QSAGN+FLKHG+ELRLIPRDRVG 
Sbjct:    5 APVTSSGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGINPSQSAGNIFLKHGSELRLIPRDRVGG 94          
BLAST of Gcaud1729.t1 vs. uniprot
Match: A0A2P6NTQ6_9EUKA (Ubiquitin-fold modifier 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTQ6_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 1.030e-45
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 0
Query:    4 RSAEDIAKMTDSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFAAEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGS 98
            ++A   A      KVTFKI LTSDPKLP++VVNVPE  PFTAVLKFAAEEF VPAATSAIITNDG+GINPQQ+AGN+FLKHG+ELRLIPRDRVGS
Sbjct:    3 QAATTQAPQASKTKVTFKITLTSDPKLPYRVVNVPENTPFTAVLKFAAEEFNVPAATSAIITNDGIGINPQQTAGNIFLKHGSELRLIPRDRVGS 97          
The following BLAST results are available for this feature:
BLAST of Gcaud1729.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QLY2_CHOCR6.010e-5296.51Ubiquitin-fold modifier 1 n=2 Tax=Rhodymeniophycid... [more]
A0A7S0ZB04_9RHOD8.000e-4891.67Ubiquitin-fold modifier 1 n=1 Tax=Timspurckia olig... [more]
A0A7M7RCD7_STRPU2.200e-4787.21Ubiquitin-fold modifier 1 n=6 Tax=Deuterostomia Ta... [more]
A0A7M7HP38_STRPU3.520e-4789.29Ubiquitin-fold modifier 1 n=5 Tax=Deuterostomia Ta... [more]
T0R064_SAPDV1.810e-4686.90Ubiquitin-fold modifier 1 n=1 Tax=Saprolegnia dicl... [more]
A0A7S2V671_9STRA3.720e-4682.22Ubiquitin-fold modifier 1 n=1 Tax=Fibrocapsa japon... [more]
A0A044V5U5_ONCVO6.400e-4687.95Ubiquitin-fold modifier 1 n=4 Tax=Onchocercidae Ta... [more]
UPI0007EF43169.090e-4685.88ubiquitin-fold modifier 1 n=1 Tax=Daucus carota su... [more]
A0A0N4XXI4_NIPBR9.650e-4684.44Ubiquitin-fold modifier 1 n=5 Tax=Strongylida TaxI... [more]
A0A2P6NTQ6_9EUKA1.030e-4577.89Ubiquitin-fold modifier 1 n=1 Tax=Planoprotosteliu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005375Ubiquitin-fold modifier 1PIRSFPIRSF038027Ufm1coord: 5..99
e-value: 9.8E-49
score: 161.3
IPR005375Ubiquitin-fold modifier 1PFAMPF03671Ufm1coord: 17..91
e-value: 4.1E-43
score: 145.2
IPR005375Ubiquitin-fold modifier 1PANTHERPTHR15825UBIQUITIN-FOLD MODIFIER 1coord: 14..99
NoneNo IPR availableGENE3D3.10.20.90coord: 10..99
e-value: 8.3E-49
score: 165.4
NoneNo IPR availablePANTHERPTHR15825:SF1UBIQUITIN-FOLD MODIFIER 1coord: 14..99
NoneNo IPR availableCDDcd01766Ubl_UFM1coord: 18..92
e-value: 1.2882E-52
score: 157.221
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 10..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1010_length_15078_cov_4.529993contigNODE_1010_length_15078_cov_4.529993:59..555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1729.t1Gcaud1729.t1Gracilaria caudata M_176_S67 malemRNANODE_1010_length_15078_cov_4.529993 59..555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1729.t1 ID=Gcaud1729.t1|Name=Gcaud1729.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=101bp
GRARSAEDIAKMTDSGKVTFKIVLTSDPKLPFKVVNVPEKAPFTAVLKFA
AEEFRVPAATSAIITNDGVGINPQQSAGNVFLKHGTELRLIPRDRVGSHI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005375UFM1
IPR029071Ubiquitin-like_domsf