Gcaud2809.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud2809.t1
Unique Name	Gcaud2809.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	540

Homology

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BLAST of Gcaud2809.t1 vs. uniprot
Match: A0A2V3IS76_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS76_9FLOR)

HSP 1 Score: 339 bits (870), Expect = 1.170e-107
Identity = 232/479 (48.43%), Postives = 273/479 (56.99%), Query Frame = 0

Query:   79 TPLRTPSTTPFKALVSPFAATAPFTAPSTPYSHSAITPVPLELSPAQTPTTLQGSSIPLRSKVPTAPTNANRVKTFHREAQAPAHHLLTPKQVRELRRLCRKTANRAEFEDRLIQIRQVASIAAMASSSLHLFDPQNPHSGLPLRVWVETHRTDGADWRDERPLSDEAIDELRRWDRLLKAWARVRFEAFQSYES-DGHQRNIFAGPRSDTTETVLQPVRLRFEQLSVGTSPTTP---LNLVRHGRTGDAK------VRDRMAQMTSPTTPDEHNTSFLRSQGANSRGANVSISKAKNAGSANGPVSSTNALHMVQSAWTKISPPV---MRNCIDERKPLGEVSINKVGDLINVTVPV----INSQQYQSGSLRGFGKPSSKGA--------DASAAKGEENTLGIEQMKSWRNVVLESSKCGSRDDEAGTGTERF-PSYGEDGYNGQDDVHG-----LIPPSRSELDWSILRGGEGSA 526
            TP +TP+ TPFKAL SPF A+APFTAP+TPYS + +TP  L LSP  TP T       L S V T  T    V      AQ    HLLTPKQVRELRRLCRKTANRA+FEDRLIQIRQVASIAAMASSSLHLFDP NPHSG  LR WV+++R DGADWRDERPLSD AI+ELRRWDRLLKAWARVRF+     +S   H  +      SD  ET L+PVRL+FE+LSVG SP TP     LV       A           +  +TSP TPDE +  F  S       A+VS S          P +     + ++S W+K  PP+   +    + RKPL EVSINKVGDLINVTVP      +S  Y    +      S+ G           +AAK    +      KSWRN +L+SS  GS   E G G  R   S      N   +V G     +  PSR++LDW  LRGG+G A
Sbjct:    9 TPAKTPNVTPFKALASPFTASAPFTAPTTPYSSAELTPHQLRLSPTLTPQTSHAPQHLLTSPVFTPVTKPLSVDPVSTPAQP---HLLTPKQVRELRRLCRKTANRAQFEDRLIQIRQVASIAAMASSSLHLFDPDNPHSGHALRAWVDSNRADGADWRDERPLSDHAIEELRRWDRLLKAWARVRFDTHNLTDSATPHPSSTVNARHSDEHETPLRPVRLQFERLSVGASPITPHYRTKLVASANAVGASPAICQPAEYSIMPLTSPLTPDERSAPFFHSPRPV---AHVSHSPL--------PATYGTDANAMRSVWSK--PPLATTLSRRAELRKPLCEVSINKVGDLINVTVPPSTPHASSSVYARDGVGNVAVRSNNGCMSEQENVFPGAAAKRASMSHASNTAKSWRNALLKSS--GSAAQEDGVGAMRVNASVNASVKNVACNVSGARDAVVTTPSRTDLDWRRLRGGDGGA 469

The following BLAST results are available for this feature:

BLAST of Gcaud2809.t1 vs. uniprot

BLAST of Gcaud2809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IS76_9FLOR	1.170e-107	48.43	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 476..519
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..458

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_425_length_26049_cov_4.672086	contig	NODE_425_length_26049_cov_4.672086:20902..22657 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2809.t1	Gcaud2809.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_425_length_26049_cov_4.672086 20902..22657 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud2809.t1 ID=Gcaud2809.t1|Name=Gcaud2809.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=540bp
LALTSVTTRSAESAEHFRMDRQRNRSLHPQPSSATPSLICVGGMLRVAET
PPPKTIAHSPLGPHSASPPSELQARIARTPLRTPSTTPFKALVSPFAATA
PFTAPSTPYSHSAITPVPLELSPAQTPTTLQGSSIPLRSKVPTAPTNANR
VKTFHREAQAPAHHLLTPKQVRELRRLCRKTANRAEFEDRLIQIRQVASI
AAMASSSLHLFDPQNPHSGLPLRVWVETHRTDGADWRDERPLSDEAIDEL
RRWDRLLKAWARVRFEAFQSYESDGHQRNIFAGPRSDTTETVLQPVRLRF
EQLSVGTSPTTPLNLVRHGRTGDAKVRDRMAQMTSPTTPDEHNTSFLRSQ
GANSRGANVSISKAKNAGSANGPVSSTNALHMVQSAWTKISPPVMRNCID
ERKPLGEVSINKVGDLINVTVPVINSQQYQSGSLRGFGKPSSKGADASAA
KGEENTLGIEQMKSWRNVVLESSKCGSRDDEAGTGTERFPSYGEDGYNGQ
DDVHGLIPPSRSELDWSILRGGEGSAPSFYSHHGAKHHK*