Gcaud202.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud202.t1
Unique NameGcaud202.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length160
Homology
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BLAST of Gcaud202.t1 vs. uniprot
Match: A0A2V3IKN0_9FLOR (Glucose-6-phosphate/phosphate translocator 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKN0_9FLOR)

HSP 1 Score: 68.9 bits (167), Expect = 1.210e-10
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0 
Query:    1 MPWLLLLFQNTLLYNSYQLASIALLERMDVLTHSLANTVKRFSAIAFMAFMAREQLAVVQMPSLLLNAVGFPMHMLAKHKTSPQAR 86
            MP    L +N +L+NSYQ ASIALLE MD LTHSL NT+KRFS I   A +  + L +  +  L L  +GFP+++  K   + ++R
Sbjct:  245 MPSFPYLLRNAVLFNSYQFASIALLEMMDALTHSLLNTLKRFSGIIISAIVLGDSLNLSHIAGLALAGMGFPLYLAGKETDAMKSR 330
The following BLAST results are available for this feature:
BLAST of Gcaud202.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKN0_9FLOR1.210e-1045.35Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4256_length_2422_cov_7.728443contigNODE_4256_length_2422_cov_7.728443:1810..2289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud202.t1Gcaud202.t1Gracilaria caudata M_176_S67 malemRNANODE_4256_length_2422_cov_7.728443 1810..2289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud202.t1 ID=Gcaud202.t1|Name=Gcaud202.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=160bp
MPWLLLLFQNTLLYNSYQLASIALLERMDVLTHSLANTVKRFSAIAFMAF
MAREQLAVVQMPSLLLNAVGFPMHMLAKHKTSPQARVPRINVSFSIGSAS
PLLLIVILDIGTFNDSELVTPVLDLMPLSIPSNKGRESHISLGIPPDYTR
LLSDTQPSP*
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