Gcaud1731.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1731.t1
Unique NameGcaud1731.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length419
Homology
BLAST of Gcaud1731.t1 vs. uniprot
Match: A0A2V3J0F3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0F3_9FLOR)

HSP 1 Score: 504 bits (1298), Expect = 5.110e-175
Identity = 235/385 (61.04%), Postives = 294/385 (76.36%), Query Frame = 0
Query:   30 SKQVTAPRPTLISGTYGGLGNQLYYLCENMLLARQGNLTFVPPSISIRHASRDNNTMPLPDVEYDEFLDSRFLSRIVNVSRTLPRHCSNGVQHVFVGRRHGILAEQVPRFTAAARLLIGQNSSETEKSRNKRFVRDAKIHRRFLPMKHGANYSFVKEISSLTGSCVFLDGHSFFRKGEEGNEYLYSFMHYVESAPRVKRLADQWNTDKLCVLHLRYDEHECVPDIERMKGMICIRRRLKQGRKGTVMWTGVTSLGNEVIEVMRKTGASSLYLATSPYVPAESRAQLISHLSKRVKVVPVVPDEIGSMLKNFVEREVAVRAKLFIGDFASTWSGTLYYKRRTLGRETDWTCSLVGKCDDKAFYAKKGKLEQPQWFEKNFDVRPTAN 414
            SK        LI G+YGGLGNQLYYLCE+++ ARQGN+T VPP++ +RH   +N T+ L D  YD FLDSRFL ++VNVS  LP HC N VQH+F+GRRHG+L  Q PR+  AA+ LIG+  +ET  S  KRF   +K+HRRFLPM +G+N+S VKE++SL GSCVFLDGHSFF KG EG EYLYSFMHY+E+APRVKRLADQW T +LCV HLRYDE EC+PD+ERMK  +CIRRRL+   K TV+WT +  L N V+ +M++ GA+ LYLA SPYVP  +  +L S  +K+VK+   VPD +G MLKNFVERE+A+RAK+F+GDFASTWSGTLYYKRRTL R+T W+C+L+ KC + AFY    KLE P+WFEK++ VRP A+
Sbjct:   38 SKPAATEHTVLIPGSYGGLGNQLYYLCEHLMFARQGNMTLVPPTVGMRHLPGENVTVYLQDEAYDTFLDSRFLKKVVNVSLVLPNHCDNRVQHIFLGRRHGVLDLQTPRYREAAQRLIGKKPNETLNSCAKRFAEGSKLHRRFLPMSYGSNFSLVKEVASLRGSCVFLDGHSFFWKGAEGQEYLYSFMHYIEAAPRVKRLADQWKTGRLCVFHLRYDERECLPDVERMKEKVCIRRRLRTRAKDTVIWTDMEPLVNGVVTLMQQKGANVLYLALSPYVPQGTALKLKSLFAKKVKIATAVPDGLGHMLKNFVERELAIRAKVFVGDFASTWSGTLYYKRRTLSRDTQWSCALLEKCTEFAFYNNHSKLETPEWFEKHYKVRPYAH 422          
BLAST of Gcaud1731.t1 vs. uniprot
Match: A0A2V3IQ90_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ90_9FLOR)

HSP 1 Score: 270 bits (690), Expect = 3.130e-83
Identity = 144/372 (38.71%), Postives = 215/372 (57.80%), Query Frame = 0
Query:   37 RPTLISGTYGGLGNQLYYLCENMLLARQGNLTFVPPSISIRHASRDNNTMPLPDVEY--DEFLDSRFLSRIVNVSRTLPRHCSNGVQHVFVGRRH-GILAEQVPRFTAAARLLIGQNSSETEKSRNKRFVRDAKIHRRFLPMKHGANYSFVKEISSLTGSCVFLDGHSFFRKGEEGNEYLYSFMHYVESAPRVKRLADQWNTDKLCVLHLRYDEHECVPDIERMKGMICIRRRLKQGRKGTVMWTGVTSLGNEVIEVMRKTGASSLYLATSPYVPAESRAQLISHLSKRVKVVPVVPDEIGSMLKNFVEREVAVRAKLFIGDFASTWSGTLYYKRRTLGRETDWTCSLVGKCDDKAFYAKKGKLEQPQWFEK 405
            +P L++ T+GG+GNQ+Y+L + ++LARQ  L  VPP+I  R   R     P    E+    F D   ++R   +S  LP  C  G+ HV++ RR  G L           ++   +  SET      R +    +HR  +      + + V E+  L  +CV +DGHSF   G   ++Y+YS +HYVE+AP VK +       ++ +LHLRYDEHEC  D E   G +CIRR+L  G   TV++   ++L   V+  MR   ++SLY+A SPYVP ++ A L +     ++V+P V   +   ++NFVERE+A+ A +F+GDFASTWSGT+Y+KRRT+G+ +DW+C LV +C D  +Y  K +L  P+WFEK
Sbjct:   50 QPALLTVTHGGIGNQIYFLLQALILARQTGLVLVPPTIPARRLPR----FPHRSEEHPAQNFWDLGVMARFAPLSEQLPSSCRRGITHVYLVRRGAGKLLPSSRLLQIVCQMAGDKQPSETVGQCADRAMSRISVHRHHMKFSTAGDPALVHELRQLRDACVIVDGHSFSFSGHRAHQYVYSVLHYVEAAPIVKEMMRNSWASRMTLLHLRYDEHEC--DTEH--GGVCIRRKLNIGSNDTVVYVTPSALVGAVVRKMRSANSTSLYIAASPYVPPQTMASLENEFQAHIRVLPRVGG-LDEAMENFVERELAINAHVFVGDFASTWSGTVYFKRRTMGKVSDWSCVLVDQCQDLGYYEDKERLNAPEWFEK 412          
BLAST of Gcaud1731.t1 vs. uniprot
Match: A0A2V3IT03_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT03_9FLOR)

HSP 1 Score: 248 bits (632), Expect = 2.540e-74
Identity = 144/378 (38.10%), Postives = 214/378 (56.61%), Query Frame = 0
Query:   37 RPTLISGTYGGLGNQLYYLCENMLLARQGNLTFVPPSISIRHASRDNNTMPLPDVEYDEFLDSRFLSRIVNVSRTLPRHCSNGVQHVFVGRRHGILAE-QVPR--FTAAARLLIGQNSSETEKSRNKRFVRDAKIHRRFLPMKHGANYSFVKEISSLTGSCVFLDGHSFFRKGEEGNEYLYSFMHYVESAPRVKRLADQWNTDKLCVLHLRYDEHECVPDIERMKGMICIRRRLKQGRKGTVMWTGVTSLGNEVIEVMRKTGASSLYLATSPYVPAESRAQLISHLSKRVKVVP--VVPDEIGSMLKNFVEREVAVRAKLFIGDFASTWSGTLYYKRRTLGRETDWTCSLVGKCDDKAFYAKKGKLEQPQWFEKNFDV 409
            RP L++ T+GGLGNQ+Y L E M+LARQ    FVPPSI  RH     ++    D   D+F D + +SR    S+  P  C++G+ + F+ +R   L E Q+       A  L   Q    + +   +  +R   I + +L      + S ++E+  +   CV +DG S+   GE  N YLYS +HYVE++  V+ L  +     + V HLRYDEH C  D  R    +CIRR+L+  +  T+++  V  L N ++  M    ++S+Y+A SPYVP      L+  L+K ++VV      DE    + NFVERE+A+ A++FIGDF STWSG +YYKRRT+G+++ W+C +VG C D AF+   GKL  P WFEK +++
Sbjct:   70 RPALLTVTHGGLGNQIYVLLEAMMLARQAGFIFVPPSIPPRHIQGIPHSSK--DHPADKFWDLKLMSRFTTTSQQ-PPSCAHGITNAFLLQRGKKLVEAQISSGLLHLACDLDPNQTQPISVRECGETALRKVLIKQIYLDHSLAGDDSLLEELRQIREGCVVIDGPSYTFSGEIANNYLYSLLHYVEASEYVQELMRKLWKPGMTVFHLRYDEHNC--DTNRTN--VCIRRKLEPRKNDTMVYVPVGGLVNAILRKMHAEKSTSIYVAASPYVPTRILKPLLQRLAKDIEVVERFQASDE---AIVNFVERELAINAQVFIGDFGSTWSGNVYYKRRTMGKKSAWSCKVVGLCTDLAFHTLNGKLNNPHWFEKMYNI 437          
BLAST of Gcaud1731.t1 vs. uniprot
Match: R7QP59_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP59_CHOCR)

HSP 1 Score: 110 bits (276), Expect = 7.260e-26
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  298 SLYLATSPYVPAESRAQLISHLSKRVKVVPVVPDEIGSMLKNFVEREVAVRAKLFIGDFASTWSGTLYYKRRTLGRETDWTCSLVGKCDDKAFYAKKGKLEQPQWFEKNFDV 409
            +L+LA SPYVP E+  QL     KR ++ P V   +    +NFVERE+AVR   FIGDFASTWSGT+YYKRRTLG +T WT  L+ K     +YA++ ++ +P+  E  F V
Sbjct:    8 ALFLAASPYVPEETVRQLREAFGKRARLAPPVKQSLLHNDQNFVERELAVRCGCFIGDFASTWSGTVYYKRRTLGLKTHWTSVLLEKSKTLGYYAEEERIPRPEELEAKFAV 119          
The following BLAST results are available for this feature:
BLAST of Gcaud1731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J0F3_9FLOR5.110e-17561.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ90_9FLOR3.130e-8338.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT03_9FLOR2.540e-7438.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QP59_CHOCR7.260e-2649.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 208..381
e-value: 1.1E-8
score: 37.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..29
NoneNo IPR availableCDDcd11296O-FucT_likecoord: 211..373
e-value: 4.37011E-11
score: 60.1236
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1010_length_15078_cov_4.529993contigNODE_1010_length_15078_cov_4.529993:9800..11056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1731.t1Gcaud1731.t1Gracilaria caudata M_176_S67 malemRNANODE_1010_length_15078_cov_4.529993 9800..11056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1731.t1 ID=Gcaud1731.t1|Name=Gcaud1731.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=419bp
MEIASSLRNMNKLLILLFILLISVLNTEASKQVTAPRPTLISGTYGGLGN
QLYYLCENMLLARQGNLTFVPPSISIRHASRDNNTMPLPDVEYDEFLDSR
FLSRIVNVSRTLPRHCSNGVQHVFVGRRHGILAEQVPRFTAAARLLIGQN
SSETEKSRNKRFVRDAKIHRRFLPMKHGANYSFVKEISSLTGSCVFLDGH
SFFRKGEEGNEYLYSFMHYVESAPRVKRLADQWNTDKLCVLHLRYDEHEC
VPDIERMKGMICIRRRLKQGRKGTVMWTGVTSLGNEVIEVMRKTGASSLY
LATSPYVPAESRAQLISHLSKRVKVVPVVPDEIGSMLKNFVEREVAVRAK
LFIGDFASTWSGTLYYKRRTLGRETDWTCSLVGKCDDKAFYAKKGKLEQP
QWFEKNFDVRPTANVFKH*
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