Gcaud8382.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8382.t1
Unique NameGcaud8382.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1045
Homology
BLAST of Gcaud8382.t1 vs. uniprot
Match: A0A2V3J2U4_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2U4_9FLOR)

HSP 1 Score: 1298 bits (3359), Expect = 0.000e+0
Identity = 670/1052 (63.69%), Postives = 830/1052 (78.90%), Query Frame = 0
Query:    1 MEAERPHVPLSRLTHDIVQNSYKELHALLDSLADYEPEHRQSRLLDAILNVRHRFARLSATVKWYMAYSAFHSSARLARNVCQERSSVFTLDADTLWQVSAATHTAADHPCAVQEAAQVLGGAPCFNRVPKIIETAIGLDQTHDMHTISRLLCSPSAAQHDHSTSGKP-----NDINNEE-DTRMLTDSAQTCF-GSKTTPESASFESDSDALKKPPQGSKLVISDSTTSGDEDEAGEAVTKDAIERLRMTTRDVICASLPQGVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRFHILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMLWAYEEARSRHDPNPIPKMLLCLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVDIAFSGVGADRQRNSPVQIRYWLRSYMRSMITISPVDDQELDSMMNSILKVEHDSELPVGPSDATFSVKSINMETLLLTCCRIRAVQELQRIRKAVQPEVSKDVDISMNSSGRATVFLVVRFNEQGVGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDNPSYSCRVLQKLISGATELLRSETTVRNAMGGGNDVILGWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMTLASVANEDDEPFVYPGLSASKRARSMPLVFSTSSDAYAFIQGRCTHPENIPKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPLEGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFEEHNCCGQIVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSAYKMVRKLPSHVEVQ-SKGINFTVGLGKRVVEVEATPRHSLIALQFIPFVEEVLQESAMEMGKRFGELLEMSLPMVVAIQAALPADRTVYKVRFSNALKARVIFGTANGKPFAIDIDARHGKGQVTIYDVPRALQTIQSGDASTVPYTVIPVWPQMVARLTEKGAGRTLYGGAAVRISVVILNRILSLIASRTGGT 1044
            MEAER  +PLSRLTHD+VQNSYKELHALLDSLADYEPE RQSRLLDAILN+RHRFARLSATVKWYMAYSAFHSSAR+AR VC +RS+VFTLDADTLW VSA T  AA HP A+QEAAQVL GA  FNR+P+IIET IGL+   DM  ISR+   PS A  D      P     N IN+   D  +  DS+      SK   ES+     +  LK   +  +  +S+ + SG E+ + E VT DA+ERLR+TTR VI +SLP+GVKLIK GVDPCA AVRIGVPDAWTADVILDKLKLDQA VVLLRF ILVDSHPDAPS IRS+FHDRERPVPL AEH+EPLRQML DRMLWAYEEA++ ++   IPK+LLCL+ AMSFECCG+LAM+HVRAQT+AFH + LWK  DI+FSGVG+D++ +SPV+I+YWLRS+++S + I+ V ++E +S+ + IL+VEH +E+PV   DA+ SVKSIN+E L+L CCR RAV ELQRIR   Q +V++++ I +NSS R++V L+V F +QGVG+ +GISL+SG FFV+  G L  ALSR ++LA +VRKELW+G++F         R  + L+S +  LL+SET VR+A+GG  DV++GW PGA+SVE PEVSK  ++V PP AAIE+KRPRRFMTL+S+ANEDDEP+++PGLSA+KRARSMPL F+TSSD YAFIQGR + P+NIP+  N L  S+SVM +W  M+ +ID+R+RRD++LRELE LK+A P++GDFRL S HRTPLKVK SPM+VE++ + ++ENG WEI LTLANE F+EHN  GQ+V+F  + R+LRF+YPD + R+   FARD+LRARTAAAL NGL+ ES+AY++  KLPSH++V+ SKGI FTVGL KRVVE++A P H L+++ F+PF EE+LQESAMEMGKR GELLEMSLPM +AIQ+ALPADR VYKVRF+NALKARVIFGTAN +PFAID+DARHGK  V IYDVPRALQTIQS +  +VPY+ +P+WPQM+ +L EK  G+  YGGAAVRI V IL +IL LIA + G +
Sbjct:    1 MEAEREDIPLSRLTHDVVQNSYKELHALLDSLADYEPEDRQSRLLDAILNIRHRFARLSATVKWYMAYSAFHSSARIARRVCNDRSTVFTLDADTLWHVSANTRAAAAHPSAIQEAAQVLSGALTFNRLPRIIETFIGLEIKRDMRNISRIFF-PSPAVRDSKRIQAPVANHSNHINSTTADAHVRADSSHVQLQNSKQNAESSYLPVQTSDLKNGLKDVRKPVSNLSESGHEEFSDEDVTTDAVERLRVTTRHVIRSSLPEGVKLIKAGVDPCAAAVRIGVPDAWTADVILDKLKLDQAFVVLLRFQILVDSHPDAPSTIRSRFHDRERPVPLLAEHREPLRQMLRDRMLWAYEEAKAANENEHIPKVLLCLAHAMSFECCGKLAMNHVRAQTIAFHKSNLWKYTDISFSGVGSDKENDSPVRIQYWLRSHLQSSVVITLVKNEESNSLPSRILQVEHGTEMPVNDFDASVSVKSINIEALVLKCCRTRAVHELQRIRSQTQEKVAEELSIDLNSSSRSSVCLLVHFGQQGVGISFGISLRSGGFFVRATGPLVTALSRGDALANDVRKELWNGERFSKGRTDDLSREFETLLSASLALLKSETAVRSALGGSADVMIGWPPGASSVETPEVSKDGRKVNPPFAAIEKKRPRRFMTLSSIANEDDEPYMFPGLSAAKRARSMPLPFTTSSDGYAFIQGRHSSPKNIPRGVNSLVCSSSVMADWMGMRNMIDMRLRRDHILRELEFLKVATPVDGDFRLQSSHRTPLKVKSSPMKVEESFLNVYENGTWEIELTLANELFDEHNYYGQVVSFSRKRRSLRFRYPDQSLRSIQCFARDVLRARTAAALINGLNAESNAYRLTVKLPSHIQVRHSKGITFTVGLCKRVVEIQARPHHPLVSVHFVPFAEEILQESAMEMGKRLGELLEMSLPMFLAIQSALPADRNVYKVRFTNALKARVIFGTANRRPFAIDVDARHGKESVMIYDVPRALQTIQS-EMQSVPYSAVPIWPQMIEQLVEKRVGKMEYGGAAVRIPVTILGQILHLIAKKAGSS 1050          
BLAST of Gcaud8382.t1 vs. uniprot
Match: R7QMP9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMP9_CHOCR)

HSP 1 Score: 514 bits (1325), Expect = 7.180e-164
Identity = 312/847 (36.84%), Postives = 477/847 (56.32%), Query Frame = 0
Query:  204 DALKKPPQGSKLVISDSTTSGDEDEAGEAVTKDAIERLRMTTRDVICASLPQGVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRFHILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMLWAYEEARSRHDPNPIPKMLLCLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVDIAFSGVGADRQRNSPVQIRYWLRSYMRSMITISPVDDQELDSMMNSILKVEHDSELPVGPSDATFSVKSINMETLLLTCCRIRAVQELQRIRKAVQPEVSKDVDISMNSSGRATVFLVVRFNEQGVGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDN--PSYSCRVLQKLISGATELLRSETTVRNAMGGGNDVILGWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMTLASVANEDDEPFVYPGLSASKRARSMPLVFS-TSSDAYAFIQGRCTHPENI--PKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPLEGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFEEHNCCGQIVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSAYKMVRKLPSHVEVQSKGINFTVGLGKRVVEVEATPRHSLIALQFIPFVEEVLQESAMEMGKRFGELLEMSLPMVVAIQAALPADRTVYKVRFSNALKARVIFGTANGKPFA------IDIDARHGKGQVTIYDVPRALQTIQSGDASTVPYTVIPVWPQMVARLTEKGAGRTLYGGAAVRISVVILNRILSLIAS 1039
            D+ K PP         S +S  EDEA         ERL+++T   +  S+P GVK+I + VDP   AVRIGVP +WTADVILD+L L+ AL++LLRF ILV  HPDA S + + +  R+ P+ LR E +EPLRQM+SDRM W   +  +    + +   LLCLS  +S EC  ++A+ HVR Q  A      WK   +A SGVG++ + + PV++RYW +S+ ++ +       + L   +  IL++ H   LP G +     ++ I+ E  LL  CR RA  E++ + K  +  +   + + + ++G  +  L V F      + +GIS K+G  FV+  G+++LA SR +S A   R  LW G++FF  +  P+  CRV   +I  A  L+R  +++  +   G   I  W PG + VE+PE S   + +RPP   ++RKRPRRF+TL S+A+EDDE +  PGL+A+KRARS+P+ F+ +SS+  AFI+GR   PE +  P  +NE+ + A+ M     ++   ++R+RRDN+LRE++    A+ ++GDF L SP+R+P+K+K S +EVE A +I+  N GW+I LTL N+ F+  N  GQ V++ P  R L F Y   +  T   F  D  RA  +AAL  GLS       +VR+ PS V +       TVG+  +  ++   P   +I+    P +EEV++ S M+ G+    LLE SLP+ +A+Q A        KV F  ALK +V++  A G+  A      I+IDAR+G  ++ I D   A +   S DA       +PVW ++V ++  +  GR+    A + + +  L +IL+ + S
Sbjct:   70 DSAKNPP---------SRSSSLEDEA--------TERLQVSTFCAVRNSMPTGVKVINSRVDPKNAAVRIGVPGSWTADVILDRLSLEDALLILLRFEILVGGHPDAQSVLNTPWRVRDEPMRLRTEQREPLRQMISDRMQWTMRDTEAVDKASRMKSALLCLSSILSLECAAKIAIEHVRTQLSALTQHTSWKIAKLALSGVGSEAKDDMPVRVRYWQKSHRKAEVAFRLPSQERLSDAIGGILQISHSPPLP-GRTHPKLEIRRIHAERYLLETCRHRAQHEVKELEKLCRLSIPSSIQMKI-AAGYTSSSLDVYFARPRPSLSFGISHKTGGLFVRLHGAVALAQSRAHSFASEFRNLLWVGERFFAKSGLPTM-CRVAVDIIEKALSLVRLNSSLEGSCAIGVGFIPTWPPGDSFVEKPEKSNAGRMIRPPFMPVDRKRPRRFLTLCSMASEDDEVYCMPGLTATKRARSLPMHFTISSSENQAFIEGR--RPEGVGQPDRSNEICSDANRMAILAEVRHATEVRMRRDNILREVK--NYADVIDGDFSLRSPYRSPIKMKPSSLEVESAALIIKGNEGWQIRLTLTNDIFDATNLRGQTVSYFPAKRLLLFSYDVSSTTTLKRFFSDFERATKSAALIKGLSAGVEVCSIVRRGPSFVAIDVSKFRLTVGVRSKSFQLGILPPQPVISKNLFPLMEEVMEASEMDAGRTLARLLEASLPLGLALQEATRRLPESMKVYFFTALKVKVLYSLARGQLSAWGQFCCIEIDARYGAQRILIMD---AFRVRASADAER-DLKPVPVWEKIVKKVVSEKRGRSHRDNAVMEVPLRTLKQILASLTS 888          
BLAST of Gcaud8382.t1 vs. uniprot
Match: A0A7S1TIA5_9RHOD (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA5_9RHOD)

HSP 1 Score: 207 bits (527), Expect = 3.350e-51
Identity = 232/895 (25.92%), Postives = 392/895 (43.80%), Query Frame = 0
Query:  238 IERLRMTTRDVICASLP--QGVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRFHILVDSHPDAPSAIRSK-FHDRERPVPLRAEHKEPLRQMLSDRMLWA---YEEARSRHDPNPI---PKMLL-CLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVDIAFSGVGADRQRNSPVQIRYWLRSYMRSMITISP--VDDQ-ELD-SMMNSILKVEHDSELPVGPSDATFSVKSINMETLLLTCCRIRAVQELQRIRKAV--QPEVS-KDVDISMNSSGRATVFLVVRFNEQGVGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDNPSYSCRVLQKLISGATEL-LRSETTVRNAMGGGNDVILGWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMTLASVANEDDEP-FVYPGLSASKRARSMPLVFSTSSDAYAFIQGRCTHPENIPKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPL-------EGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFE--EH-------------------NCCGQIVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSAYKMVRKLPSH-VEVQSKGINFTVGLG--KRVVEVEATPRHSLIAL-----------------QFIPFVEEVLQESAMEMGKRFGELLEMSLPMVVAIQAALPADRTVYKVRFSNALKARVIF------------GTANGKPFAIDIDARHGKGQVTIYDVPRALQTI---------QSGDASTVPYTVIPVWPQMVARLTEKGAGRTLYGGAAVRISVVILNRILSLI--ASRTG 1042
            ++RL   TR  + ASLP   G+++++      +  V +G+P AW A++ LD L + +++  + R  +LV   P++ +   SK +  R   +P  A     LR++  DR++     Y+   +    N     P++LL  L   +S E C   AM  +++Q      T   KS+         +  ++  + + YW  S   + ++IS   VD Q E+D S    ++ + HD  L +  S     + S+++E +L+   + RA   LQ I + +  QPE+  +  D+ + S G+  + LV+   E G  + +  SL++G    +  G++ L       + +     LW+G K FG   +    V + ++     + L S +     +  G  V     PG  SV      K   ++ PP A +ERK PRRF+TL+      +EP     G    + A+   L ++T++D   FIQ   ++ E+  +  +    SA+    W   + +++ R+RRD+L+R      +A          +GD  + S  +  +KVK  P+ V  A ++L  N  W++ LTL    F+  +H                   NC G ++TF          YP  N  +   F  DL RARTAAA +  L   +S YK++++ P   V           G G  +R     AT  +                      Q  P++EEVL  SA  +G     LLE + P+  A+++A+  +R + +VRF  AL+ RV+F              A     A D+DAR G G   + DV RA   +         Q  +     YT +P W  +VA    +   R+  GG+ V + + +L R L+ +  A+R G
Sbjct:  186 MQRLGAATRGAVQASLPGLSGIQVMRWRCGENSACVAVGLPHAWRAEISLDSLDMKRSIFRVHRVQVLVAPSPESVALRTSKRYPTRSVTIPQEAL----LRRLADDRVIAVARNYDNTFNSKGGNEEIVRPRILLEALRDLLSREFCVPFAMEILKSQAEVLSLTCQHKSMT-------CEVDKDGQIHVTYWKGSPSEAKMSISAGSVDGQGEMDLSDPELLISIGHDPPL-LHLSRHCLHLDSLDLEEILIAGMQSRARARLQAIAEDLHRQPELQLRKEDMCVASVGQH-ISLVILLRE-GNALCFSTSLRTGGLMGKPVGAI-LGYLEEGGIGD---AGLWEGDKVFGSLVAEGAAVSRAIVRVRRRIQLESASRAMCVLDVG--VTRSLPPGTPSVMGSN-QKPSSQLVPPFAQLERKAPRRFLTLSPPTERSEEPSLTSTGAGTDRVAKRQRLTYATTNDNLVFIQEN-SNLESCGR-VDRYSGSAAAALTWAVAREVVERRLRRDSLVRAFLAANVAVSTSQSTVYDDGDQDVCSASKKDIKVKCEPLPVRRAEVLLRGNDAWQVRLTLLPVIFDSTDHADTEEASNYPIDNPWSYGVNCKGSVLTFT---------YPFANAPSVTKFFMDLTRARTAAAFSRSLPP-ASMYKVIQRSPIRLVAAICPATTSDSGNGETRRRASYTATVEYVYTRANQGGFSVSFRPSRPTMDQLAPYIEEVLDASAGAIGSILAGLLERACPVAAAVESAV-RERALGRVRFVTALRMRVVFFGVPQNASRQRHPQAPTVAHAFDVDARGGGGTANVIDVGRASAGMVSQGFAHRGQGSEGRGRDYTPLPRWDTIVAAFVGQDFARSAVGGSTVTLQIEVLERFLTTLVNAARPG 1046          
BLAST of Gcaud8382.t1 vs. uniprot
Match: A0A2V3IEM5_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM5_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 1.840e-41
Identity = 235/978 (24.03%), Postives = 372/978 (38.04%), Query Frame = 0
Query:   10 LSRLTHDIVQNSYKELHALLDSLADYEPEHRQSRLLDAILNVRHRFARLSATVKWYMAYSAFHSSARLARNVCQERSSVFTLDADTLWQVSAATHTAADHPCAVQEAAQVLGGAPCFNRVPKIIETAIGLDQTHDMHTISRLLCSPSAAQHDHSTSGKPNDINNEEDTRMLTDSAQTCFGSKTTPESASFESDSDALKKPPQGSKLVISDSTTSGDEDEAGEAVTKDAIERLRMTTRDVICASLPQ--GVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRFHILVDSHPDAPSAIRSKFHDRERPVP-----LRAEHKEPLRQMLSDRMLWAYEEAR----SRHDPNPIPKMLLCLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVDIAFSGVGADRQRNSPVQIRYWL----------RSYMRSMITISPVDD-------QELDSMMNSILKVEHDSELP----VGPSDATF--SVKSINMETLLLTCCRIRAVQELQRIRKAVQPEVSK---DVDISMNSSGR-------------ATVFLVVRFN-EQGVGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDNPSY--SC-------RVLQKLISGATELLRSETTVRNAMGGGNDVILGWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMTLASVANEDDE-PFVYPGLSASKRARSMP--------------LVFSTSSDAYAFIQGR----------CTHPENIPKWTNELQNS-----------ASVMGNWTYMKMIIDLRIRRDNLLREL-------EVLKLANPLEGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFEEHN------------CCGQ---------IVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSAYKMVRKLPSHVEV 863
            L+ +T      SY++L  +L +L + +   ++S LL   +N RH FARL A ++W+       + A L  +     + VF    D LW +SA          AV  A                  T +    +H  H+ S            HS    P  +     T   ++  Q    S TTP +           +PP+ S   +              AV+    ERL + TR+ +  S      V+++        V V IGVP  W ADV LD L    AL+ +    + V SH DAP    S +  +   V      L ++    LR+M  DRM  A +  R    S  D N    M+  L   M+ E C  LAM  +RAQ  A      W S  I   G   +  RN+P+ I YWL          + Y  ++   SP  +       +    +  + +   H+  LP    +G    +F   +  +N+E  L  C ++R+   +  I  A     S+   D    M S  R             A   + +RF      G+ + I   +G   ++  G+ +LA+        NV    W G + F        +C       R   KL S A  +   +  V N +  G   +      AT+  +   S+    + PP A +ER+ PRRF+TL+   N  D    +  G ++S R R+                L ++T+SD+  FIQ                E     +  +QN+           A+    W   + +++ R++RD+L+R         ++  +    + D  L S  R  L+VK  P+ V  A ++L     W++  +L    F+  +            C  +         +   C  ++ L F YP  NP +   F RDL RARTAAALA G+   S  Y+++R+ P  + V
Sbjct:   10 LASITSKACTVSYQQLRQILTALPNKDDATKKSFLLKYAINARHAFARLLAVLRWHKLQGTTAARANLVEDAAIANAQVFEDTVDNLWDISAYLSNKLTTRPAVASAV-----------------TLLTKSASHPPHSTS------------HSKPENPRPLKRPRLTPDFSEVTQQLTPSITTPSA-----------RPPKPSSFSLG-------------AVSPSVTERLGIATRNCVRESQLHIGAVQVLSWRSGLADVCVSIGVPALWAADVSLDSLDPHLALLRVHSIRVFVASHIDAPQDDDSHWSSQRTTVNGQTSNLTSKQHALLRRMADDRMSTALKAVRAMTKSNSDVNSCSIMICALRDMMADEVCAPLAMDCLRAQARALCDGP-W-SAHIKVEGADPNPPRNTPLTISYWLPHRHPALIRIQQYPSTISVASPDAETPTHPQTERFRDVDRACISCVHEPALPNAVELGKPHPSFVLQMNRLNLEDQLCACIKLRSCARITSISNAFLERASQLRVDPSCIMLSESRIARNDQAAERCVSANDVVSIRFGGSSATGIDFRIYNLTGGLRIRPYGAAALAVPLRRESDSNV----WVGARQFESKSQEIDACIRAFEVIRARVKLDSAARSVCALDIGVSNTLPPGTASV-----AATASRDRAASQ----LVPPFAPLERRAPRRFLTLSPPPNSKDALNGLRVGTTSSSRYRTASARGFDRSSSSKRPRLTYATTSDSLVFIQESSFAGGDWRIGARDEEGCKTTSRSVQNTETDSIDRYSGTAAAAAAWAVTREVVERRLKRDSLIRAFYRASVFAQMHHMRTSEDSDLHLESASRVLLRVKCEPLPVRRAELLLRGYDVWQVRFSLLPSIFDSTDSVAVPDGSARSRCSSKSRGTGNLWSVGVSCTGSQ-LTFTYPSANPESVCSFFRDLTRARTAAALARGVPP-SRFYRVLRRSPVRIVV 917          
BLAST of Gcaud8382.t1 vs. uniprot
Match: A0A7S2ZUR7_9RHOD (Mediator of RNA polymerase II transcription subunit 14 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZUR7_9RHOD)

HSP 1 Score: 168 bits (426), Expect = 6.680e-39
Identity = 211/905 (23.31%), Postives = 359/905 (39.67%), Query Frame = 0
Query:  237 AIERLRMTTRDVICASLP---QGVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRFHILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRM---LWAYEEARSRHDPNPIPKMLLCLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVDIAFSGVGADRQ---RNSPVQIRYWLRSYMRSMIT---------------ISPVDDQELDSMMNSILKVEHDSELP-VGPSDAT-FSVKSINMETLLLTCCRIRAVQELQRIRKAVQPEVS---KDVDISMNSSGRA-TVFLVVRFNEQGVGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDNPSYSCRVLQKLISGATEL-LRSETTVRNAMGGGNDVIL----GWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMTLASVANEDDEPFVYPGLSASKRARSMPLVFSTSSDAYAFIQGRCTHPENIPKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPL----------EGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFEE-----------HNCCGQIVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSAYKMVRKLPSH--VEVQSKGINFTVGLGKR-----------VVEVEATPRHS-----------LIALQFIPFVEEVLQESAMEMGKRFGELLEMSLPMVVAIQAALPADRTVYKVRFSNALKARVIF---------GTANGKP----FAIDIDARHGKGQVTIYDVPRA--LQTIQS-----GDASTVPYTVIPVWPQMVARLTEKGAGRTLYGGAAVRISVVILNRILSLIASRT 1041
            ++ +L+  T   + A LP    G+ L+       A  V IG    W A V+L+ + ++ A + +    ILV S          + +DR+       +    L+++  DRM   L    +   R     +  ML+ +   +  E C       ++ +     + +L        S V   ++    ++ V + YW +SY    IT               + P  +    +    +  V H+ +L  V   D T         ET+L    + R    L ++R  +        ++ D+ +  S +  +V L++       GM +  S K+G+  V+  G  ++A++      +     LW G+  F      +   +  ++     L L +  T    +  G    L     W+  A+S  +P  S+    + PP A +ER+ PRRF+TL+    +++       +    + +   L ++++SD   FIQ         P+  N    SA+    W   +  ++ R+RRD+LLR      +A P           E D  + +  RT L+VK  P+ V+ A ++L  N  W+I L+L    F+                  +   C  +  L F YP  N      F RDL RARTAAALA G+   S+ Y ++R+ P    V +   G   TV  G+             VE   +  +S           L   Q  P +EE+L  S   +G     LLE + P+  A  A++  DR   +VRF  AL+ R IF           +N +P     A+D+DAR+G G   I DV RA  + T QS     G      +  +P+W ++V +L+      ++   + V + +  L   L  +   T
Sbjct:  162 SLMKLKYLTHSFVKACLPLSSPGLDLLTKDNGDDATEVAIGFAGLWRATVLLESMAVENANLRMNSLEILVASK-------NREGNDRDTGKDFSVQQLYLLKRLCEDRMKIVLHCMGKEERRDPVASVRSMLIAVRNIVVDEICIPFVFERLQLE-----ARELAARTGYGLSVVEGGKRISDEDTCVTLTYWEKSYYSGKITFESSRAKGRENGHVGMKPESNHSFRNDNTCLFTVRHEPQLANVLKLDITRXXXXXXXXETILRRTLQTRLYSRLVQLRNMILANKIANLREQDLKVIVSEQTLSVSLIIFLRNTATGMEFRCSQKTGALRVRPFGVAAMAVAN-----KTEESGLWQGENHFETFAVEATTAMLAIVQVTRRLQLEAAATAMCVLDVGATRTLPPGTAWV-AASSPADPPTSQ----LVPPFAPLERRAPRRFLTLSEPPRKENAKGTGSPVENGSKPKQR-LTYASTSDGQVFIQEGA-----FPEGENRYSGSAAAAAAWAVAREAVERRLRRDSLLRAFSATSVAYPASSWAPHGQNDEPDLDMQTTSRTLLRVKCEPLPVQKAELVLRGNNAWQIRLSLLPAIFDSTDGVQGDDGSAREASWNVGLSCVDS-ILTFTYPSANAPAVRSFFRDLTRARTAAALARGVPP-SNLYTVIRRSPVRLIVAINPDG---TVSAGQPPAHRNSNACTVTVEYVYSKGNSGGFSVTFSPSKLTFRQLEPLIEEMLDASGGSVGTVLAGLLERACPIAAAADASV-RDRGQGRVRFVTALRVRAIFMGVQRPARGARSNSQPQNTTHAVDVDARNGGGIAKIIDVGRATAIMTAQSFANRGGPHHRGKFAPVPMWDEIVEQLSRSNKATSICANSTVFLKMEFLEEFLGSLVQST 1032          
BLAST of Gcaud8382.t1 vs. uniprot
Match: R7QCA0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA0_CHOCR)

HSP 1 Score: 74.7 bits (182), Expect = 6.780e-10
Identity = 86/397 (21.66%), Postives = 150/397 (37.78%), Query Frame = 0
Query:  467 VKSINMETLLLTCCRIRAVQELQRIRKAV-----------------QPEVSKDVDISMNSSGRATVFLVVRFNEQG-VGMVYGISLKSGSFFVQTKGSLSLALSRTNSLAENVRKELWDGQKFFGDNPSYSCRVLQKLISGATELLRSETTVRNAMGGGNDVILGWLPGATSVEE-PEVSKGDKRVRPPLAAIERKRPRRFMTLAS---------VANEDDEPFVYP--------GLSASKRARSMPLVFSTSSDAYAFIQ------------------------GRCTHPENIPKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPL---------EGDFRLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFE 794
            + ++N+E LLL   ++R+   L+ + + V                 QP  +       N +      L ++    G  G+ + I   +G  +V+  G+ +L     + + ++    +W G K F D P+     +   +      L+     R+       V     PG  SV       +   ++ PP A +ER+ PRRF+TL+          +      P  +         G+     A+   L ++T+SDA  FIQ                         R    E  P   +    +A+    W   + +++ R+RRD+LLR      +A+           EGD RL S  R  LKVK  P+ V+ A ++L     W++ L+L    F+
Sbjct:    1 MNALNIEDLLLAAIKLRSRARLKHLCEGVLNKCDTFRIPPACVTLLQPRKAHTAG-DRNRTALIEDVLRIQLEPDGSAGVDFRIFDMTGGVYVRPYGAAALV----SDVEKSPDSIVWKGTKNFAD-PNAELDAVLIALETIRARLKLNAASRSVCALDAGVSCTLPPGTASVAAMASFERAASQLVPPFAPLERRNPRRFLTLSPPPPNRNILHIIQNGATPHAHARTRTSSQRGVDRGGSAKRPRLTYATTSDALVFIQESVLAGEQWLIGTPRSSAQSPLPMSRLNRSEKEP--IDRYGGTAAAAAAWAVTREVVERRLRRDSLLRAFVAANVASAAQTHHPRITEEGDLRLESASRVLLKVKCEPLPVQRAELLLRGFDAWQVRLSLLPRIFD 389          
The following BLAST results are available for this feature:
BLAST of Gcaud8382.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J2U4_9FLOR0.000e+063.69Mediator of RNA polymerase II transcription subuni... [more]
R7QMP9_CHOCR7.180e-16436.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TIA5_9RHOD3.350e-5125.92Mediator of RNA polymerase II transcription subuni... [more]
A0A2V3IEM5_9FLOR1.840e-4124.03Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2ZUR7_9RHOD6.680e-3923.31Mediator of RNA polymerase II transcription subuni... [more]
R7QCA0_CHOCR6.780e-1021.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 723..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..232
NoneNo IPR availablePANTHERPTHR12809:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 14coord: 2..135
NoneNo IPR availablePANTHERPTHR12809:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 14coord: 297..557
IPR013947Mediator complex, subunit Med14PFAMPF08638Med14coord: 8..133
e-value: 9.6E-10
score: 38.2
IPR013947Mediator complex, subunit Med14PANTHERPTHR12809MEDIATOR COMPLEX SUBUNITcoord: 2..135
IPR013947Mediator complex, subunit Med14PANTHERPTHR12809MEDIATOR COMPLEX SUBUNITcoord: 297..557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_406_length_26511_cov_4.568963contigNODE_406_length_26511_cov_4.568963:3804..6938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8382.t1Gcaud8382.t1Gracilaria caudata M_176_S67 malemRNANODE_406_length_26511_cov_4.568963 3804..6938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8382.t1 ID=Gcaud8382.t1|Name=Gcaud8382.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1045bp
MEAERPHVPLSRLTHDIVQNSYKELHALLDSLADYEPEHRQSRLLDAILN
VRHRFARLSATVKWYMAYSAFHSSARLARNVCQERSSVFTLDADTLWQVS
AATHTAADHPCAVQEAAQVLGGAPCFNRVPKIIETAIGLDQTHDMHTISR
LLCSPSAAQHDHSTSGKPNDINNEEDTRMLTDSAQTCFGSKTTPESASFE
SDSDALKKPPQGSKLVISDSTTSGDEDEAGEAVTKDAIERLRMTTRDVIC
ASLPQGVKLIKTGVDPCAVAVRIGVPDAWTADVILDKLKLDQALVVLLRF
HILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMLWAYEEA
RSRHDPNPIPKMLLCLSQAMSFECCGQLAMSHVRAQTVAFHSTQLWKSVD
IAFSGVGADRQRNSPVQIRYWLRSYMRSMITISPVDDQELDSMMNSILKV
EHDSELPVGPSDATFSVKSINMETLLLTCCRIRAVQELQRIRKAVQPEVS
KDVDISMNSSGRATVFLVVRFNEQGVGMVYGISLKSGSFFVQTKGSLSLA
LSRTNSLAENVRKELWDGQKFFGDNPSYSCRVLQKLISGATELLRSETTV
RNAMGGGNDVILGWLPGATSVEEPEVSKGDKRVRPPLAAIERKRPRRFMT
LASVANEDDEPFVYPGLSASKRARSMPLVFSTSSDAYAFIQGRCTHPENI
PKWTNELQNSASVMGNWTYMKMIIDLRIRRDNLLRELEVLKLANPLEGDF
RLNSPHRTPLKVKVSPMEVEDAHMILHENGGWEIVLTLANEQFEEHNCCG
QIVTFCPRTRTLRFKYPDHNPRTAYDFARDLLRARTAAALANGLSTESSA
YKMVRKLPSHVEVQSKGINFTVGLGKRVVEVEATPRHSLIALQFIPFVEE
VLQESAMEMGKRFGELLEMSLPMVVAIQAALPADRTVYKVRFSNALKARV
IFGTANGKPFAIDIDARHGKGQVTIYDVPRALQTIQSGDASTVPYTVIPV
WPQMVARLTEKGAGRTLYGGAAVRISVVILNRILSLIASRTGGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013947Mediator_Med14