Gcaud8390.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8390.t1
Unique Name	Gcaud8390.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	152

Homology

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BLAST of Gcaud8390.t1 vs. uniprot
Match: A0A2V3J5J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J0_9FLOR)

HSP 1 Score: 88.2 bits (217), Expect = 1.160e-18
Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = 0

Query:    2 FTTTGANLSQNVRPFPENISTEVQRFMSGIDKHGVASLEAAINRENQWLSRSTSPVRSVK-----KVESITKNNKHSNEKDLLLPVM----DDEDMEFSEAEMESDEENMSSRSGHGKFVLGMETPKTLRSTKLKISLPTVLEGEES 139
            F TT A+ S  V         + +    GIDK  V +L+AAINRE+Q + RS +P+R++K     + +  T+ +     K   LP +    D E+M FS+AE ++DEE+      HG  VLG+ TP+TLRS K KISLPTVLE E S
Sbjct:   64 FATTAASPSNAVSSNDPTAGKDKEIIAPGIDKKDVIALQAAINREHQLVHRSKTPIRNIKDKYRKQKDRDTQVDHFDEVKCRSLPKIPIGFDSEEMRFSDAEEDTDEESSLVHRIHGSLVLGVATPRTLRSMKFKISLPTVLEEEVS 210

The following BLAST results are available for this feature:

BLAST of Gcaud8390.t1 vs. uniprot

BLAST of Gcaud8390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5J0_9FLOR	1.160e-18	41.50	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_406_length_26511_cov_4.568963	contig	NODE_406_length_26511_cov_4.568963:22120..22575 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8390.t1	Gcaud8390.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_406_length_26511_cov_4.568963 22120..22575 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8390.t1 ID=Gcaud8390.t1|Name=Gcaud8390.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=152bp
MFTTTGANLSQNVRPFPENISTEVQRFMSGIDKHGVASLEAAINRENQWL
SRSTSPVRSVKKVESITKNNKHSNEKDLLLPVMDDEDMEFSEAEMESDEE
NMSSRSGHGKFVLGMETPKTLRSTKLKISLPTVLEGEESDLKKSLSSSKD
S*