Gcaud8392.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8392.t1
Unique Name	Gcaud8392.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	427

Homology

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BLAST of Gcaud8392.t1 vs. uniprot
Match: A0A2V3J2N6_9FLOR (BAG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2N6_9FLOR)

HSP 1 Score: 377 bits (968), Expect = 4.970e-125
Identity = 217/420 (51.67%), Postives = 259/420 (61.67%), Query Frame = 0

Query:    1 MQKSLATNAHLPYSKWSQHRAENGLIYLSHPVTQEVKWLWSRHNDPNTSNDYLVNTVTGDRQWVTKENEHLCPVPVDKSGNQQKANNSKPTSNAPTNPFTEKRSQRSKPPNAVKRLPNAES--PEYREIAAPKSLGLTADEVLMLVPETGRRYVFNKKTNSSRWLPDIPPDTI---PAPSTQRTFLGRAKAKAADNVDNDIHPHLREKTKTPFFDPSDPPVADHGLSTKRSSDTPSTAHKLSHSHIAAHNSTNIPSTQPPTNGAHPTRQSPTNQSRAATWRPTANMSSSSRETAPASPSVAAAEQTASSQPRKEVNPITEKLNALESVRGNINKITASGKYDMNQFRRLPTMRGKEEQLEEGSQRLLELEEYLTQQMLKVDAVESEGNQRVRAKRKETVNTILSLTDEIEQLRTKIKNLS 415
            MQ+      HLPYSKWSQHRA+NGLIYLSHPVT EVKWLWSRH+DP T  DYLVNTVTGDRQWVT ENEHLCP+P DKS N Q + N+ P+    TNPFTEKR+ R K   A    P++ S  P+YREIAAPKSLGL+ DEVLMLVP+TGRRY+FNKKTNSSRWLPD PPDTI                                    K PF DP  P   + G    + + T S        H+  HNSTN  STQP T+ ++P  ++                                      SQP +E +P+  KLNAL+++  NIN++T  GKY++++ RRL + R    Q++EG Q LLELEEYLTQQMLKVDAVESEGNQ +RA+RKETV TIL LTDEIEQLR+K+K LS
Sbjct:    1 MQRPYTNTIHLPYSKWSQHRADNGLIYLSHPVTGEVKWLWSRHHDPKTETDYLVNTVTGDRQWVTTENEHLCPLPTDKSANNQSSQNASPSKPQSTNPFTEKRANRKK--TATNPTPHSPSQKPKYREIAAPKSLGLSVDEVLMLVPDTGRRYIFNKKTNSSRWLPDTPPDTIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAPFLDPEQPSKDNDGAHANQPNRTASP-------HVPQHNSTNPTSTQPSTDSSYPLPRTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNNADPPSQPPREKDPVANKLNALDTILTNINQMTRGGKYELSKLRRLTSDRKHTSQIQEGLQHLLELEEYLTQQMLKVDAVESEGNQNIRARRKETVKTILGLTDEIEQLRSKLKGLS 411

The following BLAST results are available for this feature:

BLAST of Gcaud8392.t1 vs. uniprot

BLAST of Gcaud8392.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2N6_9FLOR	4.970e-125	51.67	BAG domain-containing protein n=1 Tax=Gracilariops...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..367
None	No IPR available	COILS	Coil	Coil	coord: 390..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..208
IPR003103	BAG domain	PFAM	PF02179	BAG	coord: 357..406 e-value: 4.3E-11 score: 43.2
IPR003103	BAG domain	PROSITE	PS51035	BAG	coord: 364..408 score: 9.983349
IPR036533	BAG domain superfamily	GENE3D	1.20.58.120	BAG domain	coord: 282..411 e-value: 5.5E-14 score: 54.2
IPR036533	BAG domain superfamily	SUPERFAMILY	63491	BAG domain	coord: 358..406

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_406_length_26511_cov_4.568963	contig	NODE_406_length_26511_cov_4.568963:23525..24994 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8392.t1	Gcaud8392.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_406_length_26511_cov_4.568963 23525..24994 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8392.t1 ID=Gcaud8392.t1|Name=Gcaud8392.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=427bp
MQKSLATNAHLPYSKWSQHRAENGLIYLSHPVTQEVKWLWSRHNDPNTSN
DYLVNTVTGDRQWVTKENEHLCPVPVDKSGNQQKANNSKPTSNAPTNPFT
EKRSQRSKPPNAVKRLPNAESPEYREIAAPKSLGLTADEVLMLVPETGRR
YVFNKKTNSSRWLPDIPPDTIPAPSTQRTFLGRAKAKAADNVDNDIHPHL
REKTKTPFFDPSDPPVADHGLSTKRSSDTPSTAHKLSHSHIAAHNSTNIP
STQPPTNGAHPTRQSPTNQSRAATWRPTANMSSSSRETAPASPSVAAAEQ
TASSQPRKEVNPITEKLNALESVRGNINKITASGKYDMNQFRRLPTMRGK
EEQLEEGSQRLLELEEYLTQQMLKVDAVESEGNQRVRAKRKETVNTILSL
TDEIEQLRTKIKNLSYIKNPGSLANE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003103	BAG_domain
IPR036533	BAG_dom_sf