Gcaud8282.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8282.t1
Unique NameGcaud8282.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length929
Homology
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A2V3IUE1_9FLOR (Polyadenylate-binding protein RBP45A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE1_9FLOR)

HSP 1 Score: 860 bits (2221), Expect = 1.090e-298
Identity = 544/994 (54.73%), Postives = 638/994 (64.19%), Query Frame = 0
Query:    1 MQQSSRSXXXXXXXXXHAKHQPASSSDAVAPNASDSQKASEHVLHELPK-TSARQPLPSAALRTRRPYPRHRKSKNRLEQQLEPTPSAHADIKEPEHLSCISAPKPSPHDVLALSSVQPTAKPMVAKPETSVHVALAPQVSAPAVSSPPVSQLASEMHNISVSSSSTTHSHQQLQQHPHQQ-QAHVSPTQEASSAQQ-----SPVPGSSSKSPASPSCHT---SHTMHASQPEQ-------------------HKSPVHHLPRHVQHQPMEPQTLP--------------------------IQMHMPNHMAIQHMPLSQPAMHPQRQLMLQPQYCSSAGDALLSSETTAVNVTTHPMH-TQGQPLQLSMSSSVDRPPSANDAQ-SYVFT---RPVNVSSATVPYQLVSPSSHSQGPQFIPENVATSHVQTAKHRGEDTTPVATSSSASPVGHT---QASDSASNKK---ECPVKEGGESGESDKIAQFVSRVKASVDGHRARPLICQDINNSNADTLRISRLPRGVTYDRLYSMVEPFGEVEELTWSSTDPYVCEVTYSDPAAAHEAKHFLGDALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAERNTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLDKTDLKGRLSVRYAEAEPLKACVAVQFHSSVPRPPNSLRDLLTATFSKHGNCSVEIPRLANGMWRKVAFVTFHGDPMAANLAALEAVQSIRFVSSLPVCCQFARELIPRLPSKGLTVERLSEANVAKSNLTAPSERVTAKLFQSKKNNLRRSEQLASASKGNTNVGRNHPENLGREFQNEKQSRGPNFVPIYVPITALQHPNAQIPPGSIVGTDNTTGPYQWSGRVLVPGGSSGDAVGHSVPNMNSTYNSFGRMPEPRSKW 928
            MQQ++RS         HAKHQPAS+SD+   N  DS+  SE      PK +SARQP PSA  R RR + RHRKSKNR E  L      H+D    +H +  SA   +     A +S  P A     K + +  +    +   P+ ++P   Q+AS+    S S+     S QQ  Q+ H+  Q  + P    S + Q      PV    S  PA P  H    S   H   PEQ                   H  PV  + R V  Q      +P                          +  H    +A Q +  +Q   H       QP   S   DA  +++ ++  V   P H +  Q + +   + V+   S  ++Q S+VF     P N     VPYQLVSP+S   G +      A       +    +T P+  S +AS VG T   Q S  AS+ K   +C  K      E D+IA+ VSR+KA  DG R RPLICQDI NSNADTLRISRLPRGVTYDRLYSMVEPFG+VE+L W  +DPYVCEVTY DPAAAHEAKHFLGDALVGSD EPPLK EL+SRD GAQLFVGDLTPDVTEEMLE  FSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHR KIGNACVRVGRAERNTYLY+SDLSP+V+MSE+K+ F +FGSLVEEDTVI++R+YAFVRYKNRNAAEKAKRTLDKTDLKGRLSVRYAEAEPLKACVAVQFHSSVPRPPNSLRDLLTATFSKHGNCSVEIPRLANGMWRKVAFVTFHGDPMAANLAALEAVQSIRFVSSLPVCCQFARELIPRLPSKGL VER  E +V +SN   P ERVTAKLF SK++ +RRSE +   +KG++  G   PE  G EF+N+   RGPN+VP+YVP+TALQHPN  +PPGS++G + T+ PY WSGRVLVPG +S + VG    ++ S YNSFG  P+  S+W
Sbjct:    1 MQQANRSGRAARSSRAHAKHQPASASDSNTQNTIDSRPPSEK---PAPKPSSARQPPPSAPPRGRRTHSRHRKSKNRPEPNLAAVAPVHSDRNHTDHSAPPSASNTANE---AHASHSPPAPIQFRKEKRAASL----RSDLPSTTNP-AHQIASDQFASSSSAPLPQLSQQQQSQNQHRSIQQDLRPASNKSPSHQHEALFQPV---HSHPPAQPLTHVPQPSAQPHRMHPEQRHAGGQPNYQAPLMQHVQTHSVPVQPVSRQVPQQDQVQAAVPAPRLSSTQPNLQSQNASYADVAAHSAVPSHSDQPIAPQPLVQTQANAHAVMHAEAQPHVYSGPCDAHQTAKPSSAAVA--PQHISASQSVHVGKQALVEHSSSPCESQQSFVFAGRAAPFN----QVPYQLVSPTSQPSGQRL----AAAPGNDLIQESAPNTNPIPASDNAS-VGQTDNAQDSSVASDGKPRIDCDRKS---EDEVDRIAELVSRIKAPSDGPRPRPLICQDITNSNADTLRISRLPRGVTYDRLYSMVEPFGDVEDLVWVPSDPYVCEVTYRDPAAAHEAKHFLGDALVGSDAEPPLKVELYSRDPGAQLFVGDLTPDVTEEMLEAAFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRAKIGNACVRVGRAERNTYLYISDLSPNVTMSELKEAFGKFGSLVEEDTVIVKRTYAFVRYKNRNAAEKAKRTLDKTDLKGRLSVRYAEAEPLKACVAVQFHSSVPRPPNSLRDLLTATFSKHGNCSVEIPRLANGMWRKVAFVTFHGDPMAANLAALEAVQSIRFVSSLPVCCQFARELIPRLPSKGLIVERGDEQSVGRSNYDVPPERVTAKLFPSKRSVIRRSENVTGGAKGSSRSGPVIPERRGAEFRNDGHGRGPNYVPVYVPVTALQHPNTPLPPGSVIGNEGTSAPYHWSGRVLVPGSAS-EGVGPHGNHLGSNYNSFG--PDRYSRW 963          
BLAST of Gcaud8282.t1 vs. uniprot
Match: UPI001E1DD2CB (polyadenylate-binding protein 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD2CB)

HSP 1 Score: 350 bits (897), Expect = 1.420e-108
Identity = 179/318 (56.29%), Postives = 237/318 (74.53%), Query Frame = 0
Query:  461 VTYDRLYSMVEPFGEVEELTWSSTDPYVCEVTYSDPAAAHEAKHFLGDALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAERNTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLDKTDLKGRLSVRYAEAEPLKACVAVQFHSSVPRPPNSLRDLLTATFSKHGNCSVEIPRLANGMWRKVAFVTFHGDPMAANLAALEAVQSIRFVSSLPVCCQFARELIPRLP 778
            +T + +  +V+ FGEV  + ++S +P   EV Y+D  +A +A H+L +A +G  ++ PL A L S   G QLFVGDLT DVTE+MLE  F K+   PV A+LKRD  +FSPIGYGFL F++ES+A+ ALV GHRV+IGNA VR+GRAERNT+LYV++L+PSV++ ++K+ F  FG LV++DT II RSYAFVR+ NR +AE+AKR+LDKTDL GR++VRY E E  K+ V VQF  S+ RP   +++LL ++FSK+G CSVEIP L NG WR VAFV + G+P AA LAA  A+Q+IRFVS  PV CQF+RELIP +P
Sbjct:    1 MTCEHVSELVQAFGEVSVIRYNSENPCSTEVVYADSVSAEDAVHYLNNAKIGV-SDVPLMATLGSHRFGTQLFVGDLTMDVTEKMLEDAFRKIAWSPVRAILKRDSKTFSPIGYGFLYFQNESAADRALVHGHRVRIGNALVRLGRAERNTFLYVTELNPSVTLQDLKETFGAFGELVDDDTTIIHRSYAFVRFYNRQSAERAKRSLDKTDLNGRITVRYGETESNKSTVHVQFCRSLSRPLPMIQELLKSSFSKYGRCSVEIPLLRNGTWRHVAFVHYIGEPFAAALAATLAIQNIRFVSDFPVSCQFSRELIPYMP 317          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A5J4X886_9EUKA (Putative RNA-binding protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4X886_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 3.490e-20
Identity = 71/239 (29.71%), Postives = 125/239 (52.30%), Query Frame = 0
Query:  527 DAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAERNTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLDKTDLKG-RLSVRYAEAEPLKACVAVQFHS------SVPRPPNSLRDLLTATFSKH-----GNCS-----------VEIPRLANGMWRKVAFVTFHGD 742
            D G  +FVGDL  +VTEE L   F+K  G    A +K+D  + + +GYGF+ F S  SA   L    +  I +  +++G AERNT + VS+L    S +E++ LFS+FG++ + + +   R  +F++YK RN A++A++ +    ++G +L + +A++  L+  V ++F+       +V    N   +    T +KH      N             +E+P+   G +R + FV F+ +
Sbjct:    4 DEGKGIFVGDLDSEVTEEELVDLFTKF-GSVQRATIKKDKYTTNSLGYGFVYFDSAESAQNVLQQNQKQWIHSRPMKIGPAERNTNICVSNLPEDTSENEIRSLFSQFGTITQVEYLPQNRQ-SFIKYKKRNEAQEARKKMSDEIIRGCQLKIGWADSASLQTSVLLRFNRKWADQMAVDDKSNRQNENSNETQTKHELFNENNIKLQLQKYGEIIRIELPKQEGGNYRGIGFVHFNAN 240          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 102 bits (254), Expect = 4.720e-20
Identity = 75/255 (29.41%), Postives = 127/255 (49.80%), Query Frame = 0
Query:  530 AQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAERNTYLYV---SDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLD------KTDLKGRLSVR--YAEAEPLKACVAVQFHSSVPRPPNSLRDLLTATFSKHGNCS-VEIPRLANGMWRKVAFVTFHGDPMAANLAALEAVQ-SIRFVSSLPVCCQFAR 771
            + LF+GDL+  V E+ML   F +L GE V   +KRD  + + +GYGF+ F++   A  A    + ++I    +R+G A++NT L+V    D+   ++   ++++FS FG + EEDT + R  Y FV++K+R  AEKAK  LD      K   K    VR  + +A   + CV VQF  +     +   +     F + G  + V +PR ++   +   F+ F  +      AA    + +   +  + + C F +
Sbjct:    5 SSLFIGDLSRSVNEDMLRKLFEQL-GE-VEVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERHITGEHLREIFSEFGPIYEEDTFVKRNKYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKPVRIGWGDANTQRNCVHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKGYGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257          
BLAST of Gcaud8282.t1 vs. uniprot
Match: Q93194_CAEEL (RNP (RRM RNA binding domain) containing n=2 Tax=Caenorhabditis TaxID=6237 RepID=Q93194_CAEEL)

HSP 1 Score: 85.9 bits (211), Expect = 2.070e-14
Identity = 71/223 (31.84%), Postives = 113/223 (50.67%), Query Frame = 0
Query:  466 LYSMVEPFGEVEELTWSSTD--PYVCEVTYSDPAAAHEA-KHFLGDALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAER----------------------NTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKA 663
            LYS   P G ++  +  S D  P + + T S P+ +H    H L  A++ S +EPP++  + +      +FVGDL+ DV+ E+L++TF+K  GE   A + RD  +    GYGF+SF ++ +A  A+   +   IG   VR   A R                      NT +YV ++S   + ++++DLFS +G + E      +R YAFVRY+ +  A KA
Sbjct:   23 LYSQF-PAGLLDTQSIQSLDTCPLLLQ-TASLPSLSHIGLPHSLESAVLHSASEPPMEMRIDT-SKHFHVFVGDLSKDVSNELLKSTFTKF-GEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR-YAFVRYEKKECATKA 240          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A2G8LEA1_STIJA (Nucleolysin TIA-1 isoform p40 n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LEA1_STIJA)

HSP 1 Score: 80.1 bits (196), Expect = 3.800e-12
Identity = 65/238 (27.31%), Postives = 108/238 (45.38%), Query Frame = 0
Query:  454 ISRLPRGVTYDRLYSMVEPFGEVEELTWSS-----TDPYVCEVTYSDPAAAHEAKHFL-GDALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAER----------------------NTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKA 663
            +  L + VT D +  +    G+V+            DPY C V ++D  AA  AKH + G  ++G + +         ++    LFVGDL P+V +++L   F +  G    A + +D ++    GYGF++F  ES A  A+       +G   +R   A R                      NT +Y+ +   S S +EV+++F  FG ++E   V   R+YAFV+Y + + A +A
Sbjct:    4 VGNLSKEVTQDYILYLFSQIGDVKGCKMIQDPNGVNDPY-CFVEFNDRNAAEHAKHSVNGRVVIGRNIKVNWATTSAKKEKTFSLFVGDLAPEVDQDLLTKAF-RPYGLVADARVVKDMNTGHSKGYGFVAFARESDAENAMKQMSGAVLGGKPIRTNWASRKQNQSKGEAKEYKSVFDKTSEANTTVYIGNTPDSFSEAEVRNMFETFGQILEV-RVYPDRNYAFVKYSDHDQAAQA 238          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A8XQM8_CAEBR (Protein CBR-TIAR-3 n=1 Tax=Caenorhabditis briggsae TaxID=6238 RepID=A8XQM8_CAEBR)

HSP 1 Score: 75.9 bits (185), Expect = 2.900e-11
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 0
Query:  532 LFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAER----------------------NTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLDKTDLKG 674
            +FVGDL+ DV+ E+L++TF K  GE   A + RD  +    GYGF+SF ++ +A  A+   +   IG   VR   A R                      NT +YV ++SP  +  +++D FS +G + E      +R YAFVRY+ +  A KA   ++  +L G
Sbjct:   55 VFVGDLSKDVSNELLKSTFQKF-GEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLRDSFSTYGDIAEVRVFKTQR-YAFVRYEKKECATKAIMEMNGKELAG 217          
BLAST of Gcaud8282.t1 vs. uniprot
Match: G0MHU6_CAEBE (CBN-TIAR-3 protein n=7 Tax=Caenorhabditis TaxID=6237 RepID=G0MHU6_CAEBE)

HSP 1 Score: 77.0 bits (188), Expect = 4.830e-11
Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 0
Query:  509 ALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAER----------------------NTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKA 663
            A++ S +EPP++  + +      +FVGDL+ DV+ ++L++TF K  GE   A + RD  +    GYGF+SF ++ +A  A+   +   IG   VR   A R                      NT +YV ++S   + ++++D FS +G + E      +R YAFVRY  +  A KA
Sbjct:  172 AVLHSASEPPMEMRIDT-SKHFHVFVGDLSKDVSNDLLKSTFQKY-GEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDSFSTYGDIAEVRVFKTQR-YAFVRYDKKECATKA 345          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A0N5AN77_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AN77_9BILA)

HSP 1 Score: 68.9 bits (167), Expect = 1.010e-8
Identity = 63/241 (26.14%), Postives = 106/241 (43.98%), Query Frame = 0
Query:  473 FGEVEELTWSSTD------PYVCEVTYSDPAAAHEAKHFLGDALVGSDTEPPLKAELHSRDAGA-----QLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAER--------------------------NTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYAFVRYKNRNAAEKAKRTLDKTDLKGRL 676
            FGEV E+T +  +      P+         +AA  A+   G  ++  +    +  +   +D        Q+FVGDLT DV  ++L   FS+  G    A +  DP +  P GYGF+S+ ++  A  A+   +   +G+  +R   A R                          N  +YV ++  SVS  E++ LF +FG L+E   +   +S AF+RY+ +  A  A   ++  +L GR+
Sbjct:   79 FGEVGEVTRTQINFKDYALPHAFVEFVDSSSAAEAAQKLNGAKILDQEIATKVLGKSSDKDRSESAQHFQVFVGDLTYDVDNQVLRDAFSQF-GNISDAKVIIDPTTQRPKGYGFVSYPTKEEAERAIEQMNGAWLGHRQIRTNWANRRLEPAEVHHKRRELSYADVYNKAGADNCSVYVGNVESSVSEEELRRLFEQFGKLMEV-RLCKSKSCAFLRYEKKEYACSAITEMNNKELNGRI 317          
BLAST of Gcaud8282.t1 vs. uniprot
Match: A0A5J4X6D2_9EUKA (RRM domain-containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4X6D2_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 1.790e-8
Identity = 34/101 (33.66%), Postives = 55/101 (54.46%), Query Frame = 0
Query:  527 DAGAQLFVGDLTPDVTEEMLETTFSKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNACVRVGRAERNTYLYVSDLSPSVSMSEV 627
            D G  +FVGDL  +VTE+ L   FS+  G     ++K+D  +   +GYGF+ F    +    L    ++ I +  +++G AERN+ ++VSDL    S  E+
Sbjct:    3 DEGKGIFVGDLDGEVTEDELTKVFSQF-GTVQMTIIKKDKQTSKNLGYGFVYFDKAEAVQHVLQLNSKLWIHSRPMKIGPAERNSNIFVSDLPEDTSEEEI 102          
The following BLAST results are available for this feature:
BLAST of Gcaud8282.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUE1_9FLOR1.090e-29854.73Polyadenylate-binding protein RBP45A n=1 Tax=Graci... [more]
UPI001E1DD2CB1.420e-10856.29polyadenylate-binding protein 2-like n=1 Tax=Merce... [more]
A0A5J4X886_9EUKA3.490e-2029.71Putative RNA-binding protein n=1 Tax=Streblomastix... [more]
A0A7S0TF52_9EUKA4.720e-2029.41Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
Q93194_CAEEL2.070e-1431.84RNP (RRM RNA binding domain) containing n=2 Tax=Ca... [more]
A0A2G8LEA1_STIJA3.800e-1227.31Nucleolysin TIA-1 isoform p40 n=2 Tax=Stichopus ja... [more]
A8XQM8_CAEBR2.900e-1132.73Protein CBR-TIAR-3 n=1 Tax=Caenorhabditis briggsae... [more]
G0MHU6_CAEBE4.830e-1131.07CBN-TIAR-3 protein n=7 Tax=Caenorhabditis TaxID=62... [more]
A0A0N5AN77_9BILA1.010e-826.14Uncharacterized protein n=1 Tax=Syphacia muris Tax... [more]
A0A5J4X6D2_9EUKA1.790e-833.66RRM domain-containing protein n=1 Tax=Streblomasti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 531..605
e-value: 4.5E-11
score: 52.8
coord: 612..679
e-value: 2.5E-9
score: 47.0
coord: 451..520
e-value: 0.15
score: 13.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 613..675
e-value: 4.7E-11
score: 42.4
coord: 532..600
e-value: 3.4E-10
score: 39.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 530..609
score: 13.037887
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 611..683
score: 12.969665
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 511..608
e-value: 2.7E-12
score: 48.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 609..688
e-value: 5.8E-14
score: 54.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..836
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..223
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 614..771
coord: 396..604
NoneNo IPR availableCDDcd00590RRM_SFcoord: 701..749
e-value: 0.0037779
score: 34.9733
NoneNo IPR availableCDDcd00590RRM_SFcoord: 532..604
e-value: 1.09896E-11
score: 59.2409
NoneNo IPR availableCDDcd00590RRM_SFcoord: 613..679
e-value: 7.26622E-14
score: 65.4041
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 531..676
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 447..511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_387_length_27166_cov_4.437230contigNODE_387_length_27166_cov_4.437230:12598..15480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8282.t1Gcaud8282.t1Gracilaria caudata M_176_S67 malemRNANODE_387_length_27166_cov_4.437230 12598..15480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8282.t1 ID=Gcaud8282.t1|Name=Gcaud8282.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=929bp
MQQSSRSGRSGRSARAHAKHQPASSSDAVAPNASDSQKASEHVLHELPKT
SARQPLPSAALRTRRPYPRHRKSKNRLEQQLEPTPSAHADIKEPEHLSCI
SAPKPSPHDVLALSSVQPTAKPMVAKPETSVHVALAPQVSAPAVSSPPVS
QLASEMHNISVSSSSTTHSHQQLQQHPHQQQAHVSPTQEASSAQQSPVPG
SSSKSPASPSCHTSHTMHASQPEQHKSPVHHLPRHVQHQPMEPQTLPIQM
HMPNHMAIQHMPLSQPAMHPQRQLMLQPQYCSSAGDALLSSETTAVNVTT
HPMHTQGQPLQLSMSSSVDRPPSANDAQSYVFTRPVNVSSATVPYQLVSP
SSHSQGPQFIPENVATSHVQTAKHRGEDTTPVATSSSASPVGHTQASDSA
SNKKECPVKEGGESGESDKIAQFVSRVKASVDGHRARPLICQDINNSNAD
TLRISRLPRGVTYDRLYSMVEPFGEVEELTWSSTDPYVCEVTYSDPAAAH
EAKHFLGDALVGSDTEPPLKAELHSRDAGAQLFVGDLTPDVTEEMLETTF
SKLVGEPVTALLKRDPDSFSPIGYGFLSFKSESSANFALVAGHRVKIGNA
CVRVGRAERNTYLYVSDLSPSVSMSEVKDLFSRFGSLVEEDTVIIRRSYA
FVRYKNRNAAEKAKRTLDKTDLKGRLSVRYAEAEPLKACVAVQFHSSVPR
PPNSLRDLLTATFSKHGNCSVEIPRLANGMWRKVAFVTFHGDPMAANLAA
LEAVQSIRFVSSLPVCCQFARELIPRLPSKGLTVERLSEANVAKSNLTAP
SERVTAKLFQSKKNNLRRSEQLASASKGNTNVGRNHPENLGREFQNEKQS
RGPNFVPIYVPITALQHPNAQIPPGSIVGTDNTTGPYQWSGRVLVPGGSS
GDAVGHSVPNMNSTYNSFGRMPEPRSKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf