Gcaud7422.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7422.t1
Unique NameGcaud7422.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length223
Homology
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A2V3J4A9_9FLOR (50S ribosomal protein L10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A9_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 3.240e-82
Identity = 145/226 (64.16%), Postives = 178/226 (78.76%), Query Frame = 0
Query:    1 MENVAFTAPLSIGVSKLNVGFQVCTGR----RSSTTLYRKSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKAGIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEEGDAPSE 222
            MEN AF AP+S+ +S  N G  V T R    RS T+  R++ + M SE ++AKKSAIV+SVKERL  S+M+FAVPLDG  VA+V+++R++LPEGT A ++KNSLMRRAIAES+WE +GDFLQQSNLWFFV+EDIK SV  Y  FA+TAK+ GIKGG FEGERCD AGIQAIAALP+K ELI ++AV +++VPTK+G   XXXXXXXXX  KLA+ DEEE  DA SE
Sbjct:    1 MENFAFAAPISVAISGFNGG-SVVTSRVAFSRSGTS--RRATIHMISEAVIAKKSAIVESVKERLAVSEMVFAVPLDGLTVANVYQLRQQLPEGTSAVSIKNSLMRRAIAESKWEAMGDFLQQSNLWFFVQEDIKQSVDVYTKFAKTAKREGIKGGGFEGERCDAAGIQAIAALPSKQELIRKIAVSLKIVPTKLGSXXXXXXXXXXXXXKLAIADEEEGSDAASE 223          
BLAST of Gcaud7422.t1 vs. uniprot
Match: R7Q865_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q865_CHOCR)

HSP 1 Score: 157 bits (398), Expect = 1.170e-44
Identity = 97/187 (51.87%), Postives = 128/187 (68.45%), Query Frame = 0
Query:   36 KSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKAGIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEEGDAPSE 222
            ++ V M SE  + KK   V  VKE L   QM+FA  L G  VA V+ +R+ +P+ T   TVKN+LMRRAI +SEW    +F   S+LWFFV++D KGSV+A+E FA+  K+  I GG ++G++CD  GI+AIAALP+K ELI ++AVGIRMVPTK     XXXXXXXXX  KLAV DE +  ++ +E
Sbjct:   39 RAAVSMVSEVNIDKKREKVALVKESLENCQMLFATNLSGLSVAQVYDLRQRVPKTTKCMTVKNTLMRRAIEDSEWASAHEFTVGSSLWFFVQDDFKGSVEAFEKFAKDLKRDPIIGGVYDGQKCDGEGIKAIAALPSKQELIQKIAVGIRMVPTKXXXXXXXXXXXXXXXXKLAVADESKGDESAAE 225          
BLAST of Gcaud7422.t1 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC)

HSP 1 Score: 143 bits (360), Expect = 9.470e-38
Identity = 87/210 (41.43%), Postives = 120/210 (57.14%), Query Frame = 0
Query:   12 IGVSKLNVGFQVCTGRRSSTTLYRKSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFART---AKKAGIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEEGD 218
            +G++     F      R  T+LY  +         L  K   V +VKE L  S+M+F VP  G  VA V  +RR LPEGT A+ VKN LM RAI  +E+E V + L+ +N+WFF++EDI GSVK+++ F +    A+   I GG  EG   D AG++ I+ LP+K+ELITQ+A  I+ VPTK+ + +         AIKLA     EEGD
Sbjct:  133 LGMAAGCAAFAPAPAERPQTSLYGGAQ---GGATTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIEEDIGGSVKSWKKFVKDEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTKVARVVKAPGMKVARAIKLAG----EEGD 335          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A6V2PHN8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PHN8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.770e-37
Identity = 83/205 (40.49%), Postives = 117/205 (57.07%), Query Frame = 0
Query:   12 IGVSKLNVGFQVCTGRRSSTTLYRKSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKAG---IKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDE 213
            +G +    G+     R  ST L+  +     S    A K A V +VKE L +S+M+F+VP     VA    +RR LPEGT    VKN+LM+RAI  ++++V G+ L+  N+WFFV+EDI GS+KA+ +F +   K     + GG  EG   D AG+ AI+ LP+KLELI Q+A  I  VPTK+ + +         AIKLA  +E
Sbjct:   11 VGTAAAFSGYTPACQRTRSTRLFGGAQGMATSP---AGKQAKVAAVKELLDKSEMVFSVPAGSITVAQTQLLRRALPEGTTMSVVKNTLMQRAIEGTDYQVAGELLKGPNMWFFVEEDIGGSIKAFNAFTKENGKTESHMVLGGVIEGVVYDSAGVTAISKLPSKLELIAQIAGAINAVPTKVARVVKEPGQKLARAIKLATEEE 212          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A7S4EQC8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQC8_9STRA)

HSP 1 Score: 135 bits (339), Expect = 6.340e-36
Identity = 91/211 (43.13%), Postives = 123/211 (58.29%), Query Frame = 0
Query:   10 LSIGVSKLNVGFQVCTGRRSSTTLYRKSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWE-VVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKA---GIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEE 216
            L++G++  +    V    R+ T LY  S+        +  K   VD+VKE L  SQMIF+VP     VA+   +RR +PEGT    VKN+LMRRA   +E+E      L+  N+WFF++EDI  S+KA+ +F + A K     I GG  EG   D AGI+AI  LP+K EL  ++A G+  VPTK+ + I   XXXXXX IKLA VDE+ E
Sbjct:    8 LTLGLATASAFQTVQPTARTETQLYGGSS---GFATTVEGKKVKVDAVKELLDTSQMIFSVPAGEVTVAESQTLRRSMPEGTTISVVKNTLMRRATEGTEYEEATAPLLKGPNMWFFIEEDIGASIKAWNAFTKEAAKTETHSINGGIVEGTNYDAAGIEAIGKLPSKKELYAKIAAGVNAVPTKLARVIKAPXXXXXXXIKLATVDEQSE 215          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A448Z550_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z550_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.050e-34
Identity = 83/220 (37.73%), Postives = 124/220 (56.36%), Query Frame = 0
Query:    1 MENVAFTAPLSIGVSKLNVGFQVCTGRRSSTTLYRKSNVRMASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWE-VVGDFLQQSNLWFFVKEDIKGSVKAYESFAR-TAKKA--GIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEE 216
            M+ V     +++G++  +         R  T LY  S+    +    A+K   V++VK  L  SQM+F+VP     VA+   +RR +PEGT    VKN+LM RA+ ++E+E      L+ +N+WFF++EDI  S+KA+ +F + T KK   GI GG  EG   D  G++AI  LP+K EL  ++A GI  VPTK+ + +         AIKLA VDE++E
Sbjct:    1 MKMVRSALLMTLGLATASAFQTAQPAVRQETQLYGGSSGYATTVEGKAEK---VEAVKGLLDSSQMVFSVPASFITVAESQSLRRSMPEGTTISVVKNTLMNRAVKDTEFEEAASSLLKGANMWFFIEEDIGASIKAWNAFTKETGKKETHGIIGGVVEGNNYDAKGVEAIGKLPSKKELYAKIAGGINAVPTKLARVVKAPNSKLARAIKLATVDEQQE 217          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A835YRM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.320e-32
Identity = 84/174 (48.28%), Postives = 113/174 (64.94%), Query Frame = 0
Query:   48 AKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAES-EWE-VVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKAGI---KGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEEE 216
            A K A + SVKE L ++ MIFA+P    KV  V  MR++LP GT AR VKN LMR A+  + +WE VVGD  +  N+WFFV++D+  S+   + F +   K      K G  EG+  D AG++AI+ LP+K EL  ++AVG++ VPTKI    XXXXXXXXX  KLA+VDE++E
Sbjct:   51 AGKLATIASVKEDLAKATMIFAIPSSQLKVNSVTDMRKKLPAGTKARVVKNKLMRLAVEGAPQWEAVVGDMTKGENMWFFVEDDLSESITVAKDFIKVVNKKDTHAPKFGVLEGKALDAAGVEAISNLPSKTELYRRIAVGVKAVPTKIXXXXXXXXXXXXXXXKLALVDEDKE 224          
BLAST of Gcaud7422.t1 vs. uniprot
Match: B8BYW1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW1_THAPS)

HSP 1 Score: 125 bits (315), Expect = 2.390e-32
Identity = 70/149 (46.98%), Postives = 94/149 (63.09%), Query Frame = 0
Query:   50 KSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGD-FLQQSNLWFFVKEDIKGSVKAYESFARTAKKAGIK------GGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKI 191
            K A V  VKE L  S+M+F VP  G  V+ V  +RR LPEGT  + VKN LM RAI  +E+  +GD FL  +N+WFF++EDI G+VK +  F    K+AG+K      GG  EG   D  G+ AI+ LP+K+ELI Q+A  ++ VPTK+
Sbjct:   45 KKATVTHVKELLDSSEMVFTVPASGITVSKVQGLRRNLPEGTTVKVVKNKLMARAIEGTEYAPIGDQFLTGANMWFFIEEDIGGTVKTWNQFV---KEAGLKDTHSILGGNIEGVNYDTKGVDAISKLPSKMELIAQIAGAVKAVPTKV 190          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A7S2ZLQ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 6.590e-32
Identity = 77/163 (47.24%), Postives = 111/163 (68.10%), Query Frame = 0
Query:   57 VKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKE-DIKGSVKAYESFARTAKKA---GIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEE 215
            V+E+L +S + FA+PL+G+ V +V ++R  +PE + A  VKN+L R AIA+S W+V GD  + SNLW F +E D+KG+V+A + F +  KK    GI GG  E    D  G++A++ LP+K +L  ++A+ I  VPTK+G+  XXXXXXXXX IKLA  +EEE
Sbjct:   91 VREQLDKSTLAFALPLEGYTVKEVSELRNVIPENSCALAVKNTLFRIAIADSTWDVAGDLTKGSNLWIFTEEADMKGTVEAIKKFNKEKKKEETNGISGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTKVGRXXXXXXXXXXXXIKLAKAEEEE 253          
BLAST of Gcaud7422.t1 vs. uniprot
Match: A0A1X6NXG2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXG2_PORUM)

HSP 1 Score: 124 bits (311), Expect = 1.320e-31
Identity = 85/200 (42.50%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   24 CTGRRSSTTLY---RKSNVRM---ASERILAKKSAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSLMRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFART--AKKAGIKGGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTIXXXXXXXXXAIKLAVVDEEE 215
            C GR +  T+    R++ +RM    +   L+ K+A++++V+E L +++ +F+ PL G  V+ V +++  LPE T   TVKN+LMR+AIA + ++V       SN+WFFVK DIK SV   ++F++T   K+ G  GG  EGE  D  G+ A++ +PTK EL  Q+A  I+ VPTK+ K++XXXXXXXXX  KLA   +EE
Sbjct:   26 CCGRPALPTVAAPPRRAALRMDGLGNPANLSGKAAVIETVEELLKDTEFLFSAPLPGLTVSQVAELKNSLPEVTKVMTVKNTLMRKAIAGTPFDVAEPLTAGSNMWFFVKGDIKESVAPLKAFSKTYKLKEFGPLGGVLEGEVFDNKGVLAVSEMPTKKELYGQIAFLIQAVPTKLAKSVXXXXXXXXXXXKLAKCPDEE 225          
The following BLAST results are available for this feature:
BLAST of Gcaud7422.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4A9_9FLOR3.240e-8264.1650S ribosomal protein L10 n=1 Tax=Gracilariopsis c... [more]
R7Q865_CHOCR1.170e-4451.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
K0STH8_THAOC9.470e-3841.43Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A6V2PHN8_9STRA2.770e-3740.49Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4EQC8_9STRA6.340e-3643.13Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448Z550_9STRA1.050e-3437.73Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835YRM7_9STRA2.320e-3248.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8BYW1_THAPS2.390e-3246.98Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2ZLQ0_9RHOD6.590e-3247.24Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NXG2_PORUM1.320e-3142.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 48..141
e-value: 1.6E-17
score: 63.5
IPR001790Ribosomal protein L10PPANTHERPTHR1156039S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 48..208
IPR001790Ribosomal protein L10PCDDcd05797Ribosomal_L10coord: 46..201
e-value: 1.16985E-37
score: 126.85
IPR043141Ribosomal protein L10-like domain superfamilyGENE3D3.30.70.1730coord: 46..171
e-value: 1.1E-25
score: 92.3
IPR043141Ribosomal protein L10-like domain superfamilySUPERFAMILY160369Ribosomal protein L10-likecoord: 46..207
IPR022973Ribosomal protein L10HAMAPMF_00362Ribosomal_L10coord: 45..202
score: 17.61824

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:30406..31074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7422.t1Gcaud7422.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 30406..31074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7422.t1 ID=Gcaud7422.t1|Name=Gcaud7422.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=223bp
MENVAFTAPLSIGVSKLNVGFQVCTGRRSSTTLYRKSNVRMASERILAKK
SAIVDSVKERLTESQMIFAVPLDGFKVADVFKMRRELPEGTIARTVKNSL
MRRAIAESEWEVVGDFLQQSNLWFFVKEDIKGSVKAYESFARTAKKAGIK
GGAFEGERCDEAGIQAIAALPTKLELITQVAVGIRMVPTKIGKTINAIPT
KVGRAIKLAVVDEEEEGDAPSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P
IPR043141Ribosomal_L10-like_sf
IPR022973Ribosomal_L10