Gcaud7419.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7419.t1
Unique NameGcaud7419.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length105
Homology
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A2V3J1L6_9FLOR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1L6_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 5.790e-53
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 0
Query:    1 MGGDSEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREERKAALKARDEAE 94
            MGG S+V EPKMQCTDEEMA++RIP+D+RDFCAHKLIPLN CRRKN YLPFRCEDERH+YEKCQYDQYMRRVNEMKAI++EERK A KAR+EAE
Sbjct:    1 MGGGSKVAEPKMQCTDEEMAQNRIPLDYRDFCAHKLIPLNNCRRKNLYLPFRCEDERHDYEKCQYDQYMRRVNEMKAILKEERKMARKAREEAE 94          
BLAST of Gcaud7419.t1 vs. uniprot
Match: R7QRG1_CHOCR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRG1_CHOCR)

HSP 1 Score: 136 bits (342), Expect = 1.010e-38
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MGGDSEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREERKAA 86
            MGG+  V E KMQ T EEM + RIP  +RDFCAHKLIPLNKCRRKNF+LPFRCE+ERHEYEKCQ+DQYMRRV EMKAI++E++KAA
Sbjct:   67 MGGNEPVGEAKMQVTREEMMEARIPNHWRDFCAHKLIPLNKCRRKNFFLPFRCEEERHEYEKCQHDQYMRRVAEMKAILKEQKKAA 152          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A8H7EJU0_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EJU0_9FUNG)

HSP 1 Score: 102 bits (253), Expect = 2.130e-26
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0
Query:   10 PKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREE 82
            P+M+ T +EM K RIP+++RD+CAH L PLNKCR + FYLP++CE+ERHEYEKCQYD Y RR+  ++    EE
Sbjct:    5 PEMKATQQEMGKSRIPLEYRDYCAHLLAPLNKCRGETFYLPWKCENERHEYEKCQYDDYKRRMRALQKAKEEE 77          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A162YAW7_PHYB8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162YAW7_PHYB8)

HSP 1 Score: 102 bits (253), Expect = 2.130e-26
Identity = 44/73 (60.27%), Postives = 58/73 (79.45%), Query Frame = 0
Query:   10 PKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREE 82
            P+M+ T +E+ K RIPI++RD+CAH LIPLNKCR + FYLP++CE+ERHEYEKCQYD Y RR+  +K    +E
Sbjct:    5 PEMKATQQELKKARIPIEYRDYCAHLLIPLNKCRGETFYLPWKCENERHEYEKCQYDDYKRRMVALKKAKEDE 77          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A4P9XR12_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XR12_9FUNG)

HSP 1 Score: 99.8 bits (247), Expect = 3.060e-25
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 0
Query:   10 PKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRV 72
            P+M  + EEM ++R+P+++RD+CAHKLIPL KCR  N+YLP+RCEDERH YEKCQYD Y RR+
Sbjct:   19 PRMIASQEEMKQNRLPLEWRDYCAHKLIPLRKCRYDNYYLPWRCEDERHAYEKCQYDDYKRRM 81          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A1Y1XW71_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XW71_9FUNG)

HSP 1 Score: 99.4 bits (246), Expect = 4.100e-25
Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   10 PKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREERKAALKARDE 92
            P M  T +EMA  RIP+ FRD CAH LIPLNKCR  ++YLP++CEDERH YEKCQYD YMRR   M+ + R++     +A+ E
Sbjct:   14 PPMIATQKEMADARIPLAFRDSCAHLLIPLNKCREASWYLPWKCEDERHGYEKCQYDDYMRRFRNMQKLKRKQELEEKQAKQE 96          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A2G5B5U9_COERN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B5U9_COERN)

HSP 1 Score: 97.8 bits (242), Expect = 1.120e-24
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    5 SEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRR------VNEMKAI 78
            +E  EP+M+ + E+MA  RIP+ +RD+CAH L+PLNKCR +  YLP++CE+ERH YEKCQY+ +MRR      +NE K+I
Sbjct:    2 AEFEEPEMKISAEDMASARIPLRYRDYCAHMLVPLNKCRHRTMYLPWKCEEERHAYEKCQYEDFMRRAKMLSQINENKSI 81          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A1Y1WBF8_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WBF8_9FUNG)

HSP 1 Score: 97.1 bits (240), Expect = 2.200e-24
Identity = 43/79 (54.43%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    6 EVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKAIVREERK 84
            E  EP+M+ T +EM++ R+P+ +RD+CAH LIPLNKCR K  YLP++CE+ERH YEKC+Y+ +MRR ++M A +++E K
Sbjct:    3 EFKEPEMKATAQEMSEARLPLRYRDYCAHLLIPLNKCRHKTAYLPWKCEEERHAYEKCEYEDFMRR-SKMLAQIKQENK 80          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A433Q0F8_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433Q0F8_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 4.820e-24
Identity = 44/83 (53.01%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    5 SEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEM-KAIVREERKAA 86
            ++V  P MQ T ++MA  RIP+++RD+CAH LIPLNKCR + FYLP++C+ ERH YEKCQY+ Y RR+  + K  ++EE++ A
Sbjct:    2 ADVDAPVMQATQKQMADARIPLEYRDYCAHLLIPLNKCRTETFYLPWKCQIERHSYEKCQYEDYKRRMRALDKQRLKEEQEKA 84          
BLAST of Gcaud7419.t1 vs. uniprot
Match: A0A090M4F5_OSTTA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M4F5_OSTTA)

HSP 1 Score: 94.4 bits (233), Expect = 2.170e-23
Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MGGDSEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLPFRCEDERHEYEKCQYDQYMRRVNEMKA 77
            MG  SE++      T EEM + ++ I +RDFCAH LIPLN+CRRK+F+LP++CE ERH YEKCQY +YM+RV  MKA
Sbjct:    1 MGTASEMI-----ATREEMREAKLDIGYRDFCAHLLIPLNECRRKSFFLPWKCEHERHVYEKCQYKEYMKRVAAMKA 72          
The following BLAST results are available for this feature:
BLAST of Gcaud7419.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1L6_9FLOR5.790e-5384.04NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
R7QRG1_CHOCR1.010e-3875.58NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A8H7EJU0_9FUNG2.130e-2658.90NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A162YAW7_PHYB82.130e-2660.27NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A4P9XR12_9FUNG3.060e-2565.08NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A1Y1XW71_9FUNG4.100e-2556.63NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A2G5B5U9_COERN1.120e-2453.75NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A1Y1WBF8_9FUNG2.200e-2454.43NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A433Q0F8_9FUNG4.820e-2453.01NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A090M4F5_OSTTA2.170e-2358.44NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePANTHERPTHR20900:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 7coord: 8..96
NoneNo IPR availablePROSITEPS51808CHCHcoord: 29..71
score: 11.365866
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PFAMPF05676NDUF_B7coord: 14..75
e-value: 1.8E-28
score: 98.0
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 8..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:25051..25639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7419.t1Gcaud7419.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 25051..25639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7419.t1 ID=Gcaud7419.t1|Name=Gcaud7419.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=105bp
MGGDSEVVEPKMQCTDEEMAKHRIPIDFRDFCAHKLIPLNKCRRKNFYLP
FRCEDERHEYEKCQYDQYMRRVNEMKAIVREERKAALKARDEAETQARLE
QGAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008698NDUB7