Gcaud1316.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1316.t1
Unique NameGcaud1316.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length723
Homology
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A2V3IUI3_9FLOR (X-ray repair cross-complementing protein 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUI3_9FLOR)

HSP 1 Score: 927 bits (2397), Expect = 0.000e+0
Identity = 485/719 (67.45%), Postives = 571/719 (79.42%), Query Frame = 0
Query:    4 EQNARRRGLAVRDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEI---SAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELD-ESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKKLDAGVDFDGDEEAERFGKKSVKRAAEQAEAALQRAAKKKAAMEEAKQACDDSMYIHRFNEHSLGKLKKPDLQLYCRAHGLPEKGNKDNLIILIEDDIQKHLDAANGN 718
            EQ ARR+GLAVRDAVVFL+DWRT MIRKDP++E++ DIS+  PCLLS+TLRCIADV+KSKI+SR GDAVGIIAFGARG   RQ WPG+R+IR LK+ DA+ VKLLQNLA  LE+GEA+ LL+LS +E+ E PI EG+ELFCFGPN  TEFDK+LWAARHQFTAVSASR SV+HRKRVFVFTND DPSRGS AIRKQCESQMKDL DMGA V VSILL P+ L DS  ND I S EFF NLIY DEDT +++KG VTIATV+SFEDLR+RVRRKEM KRA R+TVL+LGP Y+IG++MYALVR+A RPQK+ELVAST KPVFKITTNTCD+ G  LKPE IR  F   YL+D K  TP      +E GE+E                P++HGFT AEV+KAKALGK+G++LY FRK   +KPE  +G P+FLFPDDS Y+GSTQAF+TLLKCMLRR VIAIVAVRL+A+S  GMRFAAL+PQ+E FA+DIE+SVPGGFQ+HYLPY DDVYT WRKEM  L++EVK+E KEEEL +E D E  SV +AR+MVKKLELEPYSPN+FL+PDLQRFY GLENAAGIE+TYQPQDELLNPKV EMQ RA S+ME LK  +A +DFDGD EAERF  KS KRAAE                   +Q CDDS+Y+++F+  +L K+KK +LQLYCRAHGL +KGNK NL+I +E+ I++ + A+  N
Sbjct:    4 EQIARRKGLAVRDAVVFLIDWRTPMIRKDPTIEMNADISKEAPCLLSVTLRCIADVMKSKIISRNGDAVGIIAFGARGLTARQGWPGVRVIRALKASDADGVKLLQNLAHRLESGEAEDLLDLSDEEVRETPISEGDELFCFGPNGSTEFDKALWAARHQFTAVSASRLSVIHRKRVFVFTNDNDPSRGSHAIRKQCESQMKDLADMGAVVEVSILLSPSLLADSTANDAIGSAEFFNNLIYTDEDTVSDEKGSVTIATVYSFEDLRTRVRRKEMKKRAMRKTVLILGPDYKIGLLMYALVRRAKRPQKIELVASTDKPVFKITTNTCDAFGEILKPEGIRLTFKADYLKDKKYTTPGAPPSGSEGGETESLQQEQ--------LFPRLHGFTKAEVLKAKALGKIGLHLYGFRKKHFLKPEHVLGPPSFLFPDDSVYVGSTQAFSTLLKCMLRRNVIAIVAVRLNATSATGMRFAALIPQQEVFAEDIEKSVPGGFQMHYLPYMDDVYTAWRKEMNALNEEVKIEPKEEELLIEYDDELGSVGIAREMVKKLELEPYSPNHFLNPDLQRFYAGLENAAGIESTYQPQDELLNPKVEEMQERAQSDMEALKIREADIDFDGDAEAERFATKSSKRAAEXXXXXXXXXXXXXXXXXXXQQECDDSVYMNKFHNGTLEKMKKQELQLYCRAHGLSDKGNKANLVITVEEHIKEQVLASEAN 714          
BLAST of Gcaud1316.t1 vs. uniprot
Match: R7QDZ0_CHOCR (Ku core domain, Ku70 family n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDZ0_CHOCR)

HSP 1 Score: 706 bits (1823), Expect = 3.740e-245
Identity = 372/733 (50.75%), Postives = 508/733 (69.30%), Query Frame = 0
Query:    4 EQNARRRGLAVRDAVVFLVDWRTAMIRKDPSMEISEDISQ--GTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANND---KGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEM-------------------EGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKKLDAGVDFDGDEEAERFGKKSVKRAAEQAEAALQRAAKKKAAMEEAKQACDDSMYIHRFNEHSLGKLKKPDLQLYCRAHGLPEKGNKDNLIILIEDDIQKHL 712
            E+  RRRG+ VRD++VFLVD+R +MIRKDP+++I+ DI +  G   LLS+TLRCIADV+K+KIV+R  D++ ++AFG RGS TR+ WPG+R++R LK  DA  +KLLQ +A+ LE G+ D L E+ ++EL +  +P  +  FCFG ++P EFDK+LWA RH FTA++A+R  V+HRKRVFVFTND+DP  G+ A+++   +Q KDL DMGAS+ VS+L+ P+Q+ D+ +++   S+ FF +L+Y +++    D   +G V IAT++SF+DL +RVR+KE  KR  R+TVLVL   Y+IGV +YALVRKA RP KVELVA+T KP F+ITT TC+S G  LKPEEIR  FTP  L++ +          G++E + D    D       P +HGF  +E+ KAKALG +G+ +Y FRK S+++ E  MG PTF++PDD+EYIGST+AF  LLKCML++ V+ +V+VRL    G GMRFAALVPQEE   +D+E SVPGGF LH LPYKDD+YT WRKEM                   EG    + V++++ E     +E ESV+V R+MV+K+++  YSP  FL+PDLQRFY GLENAAG+E+ Y PQD+LLNP V  +Q +     EE+K+L  G  FDGD  AE FG K+ KR AE  E  L++ A+K+AA E A+   D+ M +  FN+ +LGKL K DLQ+YCRAHGL E+G K +L++ +ED I   L
Sbjct:    5 EEYGRRRGMNVRDSLVFLVDFRVSMIRKDPAIDIAADICETPGASSLLSITLRCIADVMKTKIVARNSDSIAVVAFGCRGSETRKGWPGVRVLRQLKPADATGIKLLQGIAQRLEAGDGDDLFEMETEELKKLEVPATDRNFCFGADEPVEFDKALWAVRHHFTAIAAARLGVMHRKRVFVFTNDDDPGSGNRAVKQLSLTQAKDLEDMGASLDVSLLMSPSQM-DTGMSEGPDSSTFFNDLVYTEDEGDEGDGETRGSVMIATIYSFDDLLTRVRKKEAKKRMMRKTVLVLADDYKIGVALYALVRKAKRPPKVELVAATNKPAFRITTATCESVGEVLKPEEIRYMFTPDCLKNAR----------GKAEASSDL---DETVAKPAPLLHGFKKSELTKAKALGPIGLVVYGFRKKSVLRREHTMGPPTFVYPDDTEYIGSTKAFTCLLKCMLKKGVVGLVSVRLREEFGPGMRFAALVPQEEVVDEDVENSVPGGFHLHELPYKDDIYTAWRKEMRKQEDSTEVNGEEGAWAKQEGEEAALVVKEEDMEASELRNEPESVSVTRRMVRKMKIATYSPGMFLNPDLQRFYAGLENAAGVESRYNPQDDLLNPDVAMLQEKGGVYAEEMKRLVVGAQFDGDALAEEFGTKTKKRGAETLEKRLKKTAEKRAACEAARGELDELMMLSMFNKGTLGKLLKADLQVYCRAHGLNERGKKQDLVMAVEDHIADKL 723          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A1X7U768_AMPQE (SAP domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U768_AMPQE)

HSP 1 Score: 159 bits (401), Expect = 1.820e-37
Identity = 154/612 (25.16%), Postives = 260/612 (42.48%), Query Frame = 0
Query:    3 DEQNARRRGLAVRDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHS--FEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYT-EWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKK 611
            DEQ A     A +D ++ L+D    M  KD         ++G P    L ++C   V+ +K++S   D VG++ FG        ++  + I++ L   DA  +K            E + +LE    +  EK     N+   F  +D        W      T +S S     HR R+ +FTN++ P + + A+++Q +++ KDL + G  V +             +      T F+  +++       +D GD T     S  FE+L +RVR KE+ KRA +R    LGP   +GV +Y +VR+  +P  + L   T + +   T   C+  G+ L P +I+      Y +        +    GE  +                    F   E+ + K  GK G  L  FR  S MK    +    F++PD++   GST+ F+ LL+  + R+V+A+   +    + +   F ALVPQEE+  D   Q  P GF + +LP+ +D+ + +   EM   S                   E +  A++++KKL    +   +F +P +Q+ Y  LE  A      +   +L  P   ++  RA   ++E  K
Sbjct:   21 DEQQAGPGYSATKDCLILLIDVSLGMFVKDEE-------TKGIP--FELCIKCARSVLLNKVISSEKDLVGVVFFGTNKENNPSDFKHVYILQDLDMPDAPRIK------------ELETMLEDEGFQTFEKDYGHSND---FSLSDV------FWTCS---TMLSTSGAKSSHR-RILLFTNNDHPHQSNPALQRQAKTKAKDLAENGIEVELM-----------HIGSGFNVTSFYQEIVF-------SDDGDGTSFPDPSEKFEELLTRVRSKELKKRALQRITFSLGPDLELGVGVYCMVRETKKPSFIRLDKRTNEELKTQTKKLCEDTGSILLPTDIK------YYQ--------VLGAGGEKVI--------------------FEEEEIKELKNFGKPGFTLMGFRPKSKMKMHHYIKPANFIYPDETTVSGSTKLFSVLLRRCISREVVAV--CKYIPRNNSPPIFVALVPQEEELDDSNIQISPPGFHVIFLPFSEDIRSLDLPDEMPKAS------------------HEQIDKAKEIIKKLSFN-FQSESFENPVIQKHYRVLEALALEHEEEEEITDLTVPDAAQINKRAGKAIDEFMK 525          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A2P6NKD0_9EUKA (Ku domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NKD0_9EUKA)

HSP 1 Score: 160 bits (405), Expect = 2.410e-37
Identity = 148/567 (26.10%), Postives = 239/567 (42.15%), Query Frame = 0
Query:   15 RDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEK---PIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAA 578
            +DA++FL+D   AM  K+ + EI               ++C    +  KI+S   D VGI  +G +       + G+ I                     L+N +A  +L+  S   G+K    +   ++ F F          +LW      T  SA+R  V HR R+F+FTN++DP+    A R++   + +DL D+G  + +  + +P +  D +V        F+ ++I  DED    D   +       FE+L+SRVRRKE  KR        L P   I V +Y+L+  + +   + L + T + V   T   C+  GT L   ++R  F                   G   +                    F   ++ K K  G VG+ L  F+  S +K   N  + +F++PD+    GST  FA LL  M  R  IA+   R S        F ALVPQEE   ++  Q  P GF + +LP+ +D+     +++ G              D +  + + +A A+K+VK L ++ +   NF +P LQ+ Y  L+  A
Sbjct:   34 KDAIIFLIDSTPAMFVKNEAGEIP----------FHNAIKCAMATLTDKIISSDSDLVGICLYGTKKKKNTNEFEGVYIFH------------------DLDNPDAQVILDCESIIAGDKFDQTVGSTHKNFTFSD--------ALWTCS---TIFSANRTKVGHR-RIFLFTNEDDPNGNDDACRERSSQRARDLSDLGIDIELFSMNKPEKKFDPSV--------FYQSIITFDED---EDGAAINFDASDKFEELKSRVRRKEFKKRPISSLPFSLAPDVEISVKIYSLISASKKTSFIWLDSRTNESVRSATKWVCEDTGTLLLDSQMRSGF-----------------HYGGERII-------------------FDKEDMQKIKVAGMVGLKLLGFKDKSALKVWQNYKTSSFIYPDEHATKGSTVTFAALLDRMKSRDKIAV--CRYSLRITTSPSFVALVPQEEIEDEEGVQVSPPGFHMVFLPWAEDI-----RDITGTE------------DFKTADEQQIAKAKKIVKCLRIK-FDSRNFENPALQKHYAALQAIA 493          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A7S4IPE9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IPE9_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 5.360e-36
Identity = 136/494 (27.53%), Postives = 215/494 (43.52%), Query Frame = 0
Query:   15 RDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDV 508
            +D V+FL+D + +M   +   EI               ++C    +  KI+S   D +G+  +G +       +  I +++ L   DA  +                  LEL S    E P P GN   C   +    F  +LW     F+  +      +  KR+F+FTND++P+     +++Q   + KDL ++G  + +  +   ++  D+++        F+ ++I  DED      G + +     FE+LR+RVRRKE  KRA  +   +L P  ++GV ++ L+++A +   + L A   + +   T   C + G+ L P +I K F  PY               GE  +                    F+N E+   K   + GI L  F+    +K    +   +FL+PDDS   GST  FA  L  ML R  IAI   R      A  RF ALVPQEE+F +D  Q VP G  + YLPY DD+
Sbjct:   38 KDCVIFLIDSQESMFVPNEKEEIP----------FQNAVKCAIATMTDKIISSDTDLLGVCFYGTKQKKNLNEFENIFVLQELDVPDAQRI------------------LELESYLKHEDP-PFGN---C---DTDFPFCDALWTCSTMFSNCTVK----VGHKRIFLFTNDDNPNENDSNVKEQSIQRAKDLSELGIDIELFGMNCGDKSFDASL--------FYQHIISFDEDEFT---GAMNMDASEKFEELRARVRRKEFKKRALGKIPFILRPGLQMGVRLFNLIKEAKKNTHISLDAKYNQRIKIATKYVCKATGSLLMPNQIAKYF--PY--------------GGEKVM--------------------FSNDELKAIKTPCEKGIQLMGFKPIEALKKYHAVREASFLYPDDSVIKGSTTLFAAFLDRMLSRNKIAI--ARFVPRDNAMPRFVALVPQEEEFDEDGTQMVPPGLHVVYLPYCDDI 443          
BLAST of Gcaud1316.t1 vs. uniprot
Match: M2Y1X4_GALSU (ATP-dependent DNA helicase 2 subunit 1 isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1X4_GALSU)

HSP 1 Score: 153 bits (387), Expect = 1.020e-35
Identity = 165/667 (24.74%), Postives = 282/667 (42.28%), Query Frame = 0
Query:   48 LLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFT-AVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYR---------IGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTL-KPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKKLDAG--VDFDGDEEAERFGKKSVKRAAEQAEAALQRAAKKKAAMEEAKQACDDSMYIHRFNEHSLGKLKKPDLQLYCRAHGLPEKGNKDNLI 701
            L++L L CI ++ KS+I+S TGD +G++ FG        +   I ++  L   D  ++  L+ L K+ +      + +L S E   K                 +F + L+  R     AV +   +V  RKR+ +FT+D+DP      ++     Q +DL + G ++ + + L+ ++           S  F  +L Y D   ++  + +     +  FE+L+  + +K+  KR    T L L              +G+ +YAL  +  R +KV L A   +PV ++T    +  G  L    +IR +F  P+                             A    +     FT++E+ +   L + G+ L  F   + +K ++NM    FL+P D    GS    A L K ML+   IAIV V    +S    R AALVPQ+E   +   Q+ P GF L +LP+ +++  EW+K+    +               L   + V  A  ++ KL +  Y P+ +  PD+QR+Y GL+  A  +  +   ++ L+    +M   A  E+EE  K+ A   V     E++ R  K+            ++RA +K  + +  +Q  D            L K     L+++C AH L + G K  LI
Sbjct:   11 LITLALNCIKEIFKSRIISDTGDLLGVVLFGTSKVNNPNDLASIYVLLELDVPDPESILYLETLEKTPQW----MMSQLGSLERYAK----------------VKFQELLFTCRSLLNHAVRSKTLNV--RKRLLLFTDDDDPIENDENVKNLNIRQARDLSESGMNIEL-LPLKSSR-----------SKPFDYHLFYEDVIGSSRQELEPVSDPISRFEELQLHILKKKYKKRVLNNTFLYLNGLQNEGAHAELETVGLEVYALFHRPSRSKKVFLEARNNEPVRRVTIAYSEESGALLANANDIRYSF--PF-----------------------------AGVACV-----FTHSEMEELGHLCRYGMELIGFENKNKLKWQYNMRPSYFLYPSDHTIKGSQLLMAVLWKQMLQENQIAIVRVCFRRTSHP--RLAALVPQDEKKTESHLQTEPCGFHLIWLPFAEEIRKEWKKQYPKWNN--------------LPSQQCVEAAMNVISKLSMPSYDPSKYSDPDIQRYYNGLQALALNQTNFPQVEDTLDTDDAQMAQVAKEELEEWTKIVASEPVGIIKQEKSLRSPKRFH----------IKRAVEKLRSKQFLEQQLDWKQLAFDKGNDGLEKQNVTTLKMFCAAHDLKKSGRKAELI 581          
BLAST of Gcaud1316.t1 vs. uniprot
Match: UPI000C04D3EE (X-ray repair cross-complementing protein 6-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04D3EE)

HSP 1 Score: 150 bits (380), Expect = 9.960e-35
Identity = 146/581 (25.13%), Postives = 248/581 (42.69%), Query Frame = 0
Query:   32 DPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKKL 612
            D S E+ +    G P    L ++C   V+K KI+S   D +G++ +    S    ++  + I + L   DA  +    +L K LE+   D+  E                   FG +     +  LW   + F   S S   + H KR+ +FTN+E+P     A++++ +++ +DL ++G ++ +  +  P+   DS+             L+Y D    + D+G +       FE+L +RV++KE  KR       +L     +GV +Y L R   +   V L + T + V   T   C   G+ L P +I+                      GE  +                    F   EV + K+ G  G+ L  F+  S +K  F++    FL+P +    GST  F+ LL   L R VI I   R    + A  RF AL+PQ+E+  +   Q+ P GF L +LP+ DD+            +++K E+  +        +E V  A++++KKL L  +  ++F +P LQ+ Y  LE  A   +  +   +L  PKV  ++ +A   + E K +
Sbjct:   44 DCSKEMLQHSRDGIP--FQLCVKCAISVLKHKIISSDKDLIGVVFYATEKSKNPGDFKHVYIYQELDLPDAQRIL---DLEKFLEDDTCDNFGE------------------TFGHSSGFSLNDVLWTCANMF---SNSGQKIGH-KRIMLFTNNENPHAEDPALQRRAKTKSRDLNEVGIAIELMHIQPPDLPFDSS-------------LLYQDVIQMDEDEGGILPDPAEKFEELLTRVQKKEHKKRPLATLPFMLADGIELGVSVYNLCRPTTKSSYVNLDSHTNEEVKIHTKYICVDTGSDLLPTDIKL----------------YQMFGGEKVI--------------------FEKEEVAEMKSFGSPGLLLMGFKPRSSLKNYFHLRPAQFLYPSEKIISGSTTLFSALLNRSLARDVIPI--CRFIPRNNAAPRFVALLPQKEELDEHNNQTTPPGFHLIFLPFTDDL------------RKLKYEETPKAT------TEQVNKAKEVIKKLTLG-FDCSSFENPSLQKHYKNLEALALDRDEPEEVTDLTEPKVEAIERKAGEAIREFKDI 527          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A6T6KC51_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6KC51_9RHOD)

HSP 1 Score: 150 bits (380), Expect = 1.690e-34
Identity = 141/501 (28.14%), Postives = 228/501 (45.51%), Query Frame = 0
Query:   16 DAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPT-EFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCM---LRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEW 512
            D ++FL+D+R +M     +  + ED   G   LLS  LRC A+V+K KI+SR  D VG++ FG   +    ++  I ++R L   DA  +  L+NL+K       D +L               +E +  G +D    F ++LW  R  F     SR S+  R+RVF+ TND+DP++G  + R Q   Q +DL D GAS+ +  L        +A   +    E F N I L  DT   D G++    V  F +++ R++ K+  KR      + L     I +  + L+RKA R + V L A   KPV + T+         L P +I   ++               A +G+ E          A +    +  GF N E +    L    ++L+                   LFP++  +  S +A + L   +   + +K +A++    S+ SG+  RFAA++PQ E+  DD+ Q VP G+ L +LPY +D+  ++
Sbjct:   59 DELIFLIDFRESM-----ATSVDED-GNG---LLSSCLRCAAEVLKDKIISREYDLVGVLGFGTEKTDNSNSFSNICVVRSLGISDAVGILDLENLSK-------DPILV--------------HERYGHGASDSIFSFHQALWTCRSMFAQSKVSR-SMKSRRRVFILTNDDDPAKGDESQRTQSAVQARDLLDAGASIELFCL-------GTAGTSKKFDAEKFFNDIILRTDT---DDGNLVNVPVSRFPEIKRRLKNKQHRKRIEATCYIHLADDKVITLAGFFLIRKATRSRAVALDAKNNKPVRRQTSTWSSETAEILHPRDIGYGYS----------FASTIACLGDGERRSLKM----ACSSNRFRCLGFINLETVPWDLLSSHPLFLHP------------------LFPEERSWTESLKAQSALFASVNEEMEKKGLAMLVYGSSSRSGSLNRFAAVLPQREEVVDDV-QVVPSGWLLVFLPYAEDLRQDY 485          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A6H5L1C1_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1C1_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.840e-34
Identity = 183/711 (25.74%), Postives = 294/711 (41.35%), Query Frame = 0
Query:   13 AVRDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSAT-RQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDK-GDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVL-----GPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESES-VAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIEN--TYQPQ-DELLNPKVTEMQSRAASEMEELKKLDAGVDFDGDEEAERFGKKSVKRAAEQAEAALQRAAKKKAAMEEAKQACDDSMYIHRFNEHSLGKLKK---PDLQLYCRAHGLPEKGNKDNLIILIEDDIQ 709
            AV D  + L+D R       P+M  S +    TP     ++R    ++KSK+V      VG+  FG + ++   ++   + ++  L    A  ++ L  LAK    GE                +   N+    G +DP      LW+ + +F  +       L  KRVF+FTND+DP RG     K+     +D  +    + +  + R     D           F+  +I  D D  N    GD   +T     +L  +VRRKE  KR   R    L     G      V ++ +V  A RP  + L A T KPV  I+    D  G  L   E+R          T L      A + + E+                             K L   G+ L  FR  + ++P+FN+ SP FL+PD+    GS +AF  L   M+ ++V A+   R + ++GA  R  AL+PQEE   +  EQ  PGGF    LP+ D+V            +E K  Q  ++ DV+ +  ES V+ A  +VK L+LE +    F +P LQR Y  L+  A  E   ++ P+ D+   P    + +     +EE K     V + GD+E +     + + A    E +  +  K +          DD+  I+   E + G++ +   P L+ + ++ G+   G K +L+  ++  +Q
Sbjct:   27 AVNDHCILLIDAR-------PNMFESLNGEGDTP--FHASMRTAVQLMKSKVVQSDKHRVGVTFFGTKKTSDIEESNENVFVVLDLAPPSAKRIRDLDALAK----GE----------------VSFDNKYGSIGADDPCPLKSGLWSCQTEFNNIKQP----LDHKRVFLFTNDDDPLRGDPEETKKVHMIAQDAVNASIEIKLFHIKRKGAPFDPDT--------FYRAIITGDGDDYNEQSLGDGAEST----NELLDKVRRKEFKKRRLARLPFYLREGPEGTGLSFDVQVFNMVHPAKRPTPIYLDARTNKPVQIISKLMDDKTGAQLDAHEVR----------TYLEFAGERAYISKDEMG--------------------------TLKGLYPKGLALLGFRPNNTLRPDFNIRSPYFLYPDEESTTGSAKAFIALHAAMVDKRVYAL--ARFTRAAGAAPRMVALLPQEE-VVEGGEQLQPGGFNTVVLPFADEV------------REAKAPQTADD-DVKPEVKESGVSAAEGVVKALKLESFDFRKFENPVLQRHYAALQALALSEEEISWDPEKDDRTRPDEKGLDAAGGPVLEEFK-----VSYGGDQEDDLPAAGAKRSAGGSGEGSGAKRVKTE----------DDASKINWQEELAKGQIDRFTVPTLKSFLKSRGMSATGKKGDLVARVQQALQ 625          
BLAST of Gcaud1316.t1 vs. uniprot
Match: A0A2B4SAB1_STYPI (X-ray repair cross-complementing protein 5 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SAB1_STYPI)

HSP 1 Score: 150 bits (380), Expect = 5.580e-34
Identity = 146/581 (25.13%), Postives = 248/581 (42.69%), Query Frame = 0
Query:   32 DPSMEISEDISQGTPCLLSLTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSCDANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDPTEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQCESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDTANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMMYALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPPYLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKAKALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLKCMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLHYLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVKKLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQSRAASEMEELKKL 612
            D S E+ +    G P    L ++C   V+K KI+S   D +G++ +    S    ++  + I + L   DA  +    +L K LE+   D+  E                   FG +     +  LW   + F   S S   + H KR+ +FTN+E+P     A++++ +++ +DL ++G ++ +  +  P+   DS+             L+Y D    + D+G +       FE+L +RV++KE  KR       +L     +GV +Y L R   +   V L + T + V   T   C   G+ L P +I+                      GE  +                    F   EV + K+ G  G+ L  F+  S +K  F++    FL+P +    GST  F+ LL   L R VI I   R    + A  RF AL+PQ+E+  +   Q+ P GF L +LP+ DD+            +++K E+  +        +E V  A++++KKL L  +  ++F +P LQ+ Y  LE  A   +  +   +L  PKV  ++ +A   + E K +
Sbjct:  520 DCSKEMLQHSRDGIP--FQLCVKCAISVLKHKIISSDKDLIGVVFYATEKSKNPGDFKHVYIYQELDLPDAQRIL---DLEKFLEDDTCDNFGE------------------TFGHSSGFSLNDVLWTCANMF---SNSGQKIGH-KRIMLFTNNENPHAEDPALQRRAKTKSRDLNEVGIAIELMHIQPPDLPFDSS-------------LLYQDVIQMDEDEGGILPDPAEKFEELLTRVQKKEHKKRPLATLPFMLADGIELGVSVYNLCRPTTKSSYVNLDSHTNEEVKIHTKYICVDTGSDLLPTDIKL----------------YQMFGGEKVI--------------------FEKEEVAEMKSFGSPGLLLMGFKPRSSLKNYFHLRPAQFLYPSEKIISGSTTLFSALLNRSLARDVIPI--CRFIPRNNAAPRFVALLPQKEELDEHNNQTTPPGFHLIFLPFTDDL------------RKLKYEETPKAT------TEQVNKAKEVIKKLTLG-FDCSSFENPSLQKHYKNLEALALDRDEPEEVTDLTEPKVEAIERKAGEAIREFKDI 1003          
The following BLAST results are available for this feature:
BLAST of Gcaud1316.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUI3_9FLOR0.000e+067.45X-ray repair cross-complementing protein 5 n=1 Tax... [more]
R7QDZ0_CHOCR3.740e-24550.75Ku core domain, Ku70 family n=1 Tax=Chondrus crisp... [more]
A0A1X7U768_AMPQE1.820e-3725.16SAP domain-containing protein n=1 Tax=Amphimedon q... [more]
A0A2P6NKD0_9EUKA2.410e-3726.10Ku domain-containing protein n=1 Tax=Planoprotoste... [more]
A0A7S4IPE9_9EUKA5.360e-3627.53Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
M2Y1X4_GALSU1.020e-3524.74ATP-dependent DNA helicase 2 subunit 1 isoform 1 n... [more]
UPI000C04D3EE9.960e-3525.13X-ray repair cross-complementing protein 6-like n=... [more]
A0A6T6KC51_9RHOD1.690e-3428.14Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6H5L1C1_9PHAE2.840e-3425.74SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2B4SAB1_STYPI5.580e-3425.13X-ray repair cross-complementing protein 5 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 629..659
NoneNo IPR availableCOILSCoilCoilcoord: 509..529
NoneNo IPR availableGENE3D1.10.1600.10coord: 522..614
e-value: 7.3E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR12604KU AUTOANTIGEN DNA HELICASEcoord: 9..709
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 305..722
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..304
NoneNo IPR availableCDDcd00788KU70coord: 281..612
e-value: 2.26855E-53
score: 184.021
IPR006164Ku70/Ku80 beta-barrel domainSMARTSM00559ku_4coord: 335..515
e-value: 2.7E-6
score: 36.9
IPR006164Ku70/Ku80 beta-barrel domainPFAMPF02735Kucoord: 291..533
e-value: 2.8E-24
score: 85.9
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 15..277
e-value: 2.4E-38
score: 133.8
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 15..253
IPR006165Ku70PIRSFPIRSF003033Ku70coord: 3..710
e-value: 9.2E-73
score: 243.2
IPR006165Ku70PANTHERPTHR12604:SF2X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6coord: 9..709
IPR005160Ku70/Ku80 C-terminal armPFAMPF03730Ku_Ccoord: 557..649
e-value: 9.4E-5
score: 22.9
IPR027388Ku70, bridge and pillars domain superfamilyGENE3D4.10.970.10Ku70, bridge and pillarscoord: 306..404
e-value: 3.0E-35
score: 123.8
IPR016194SPOC-like, C-terminal domain superfamilyGENE3D2.40.290.10coord: 281..504
e-value: 3.0E-35
score: 123.8
IPR016194SPOC-like, C-terminal domain superfamilySUPERFAMILY100939SPOC domain-likecoord: 281..612
IPR005161Ku70/Ku80, N-terminal alpha/betaPFAMPF03731Ku_Ncoord: 17..282
e-value: 3.3E-14
score: 53.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_371_length_28318_cov_4.596486contigNODE_371_length_28318_cov_4.596486:8531..10699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1316.t1Gcaud1316.t1Gracilaria caudata M_176_S67 malemRNANODE_371_length_28318_cov_4.596486 8531..10699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1316.t1 ID=Gcaud1316.t1|Name=Gcaud1316.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=723bp
MIDEQNARRRGLAVRDAVVFLVDWRTAMIRKDPSMEISEDISQGTPCLLS
LTLRCIADVIKSKIVSRTGDAVGIIAFGARGSATRQNWPGIRIIRPLKSC
DANAVKLLQNLAKSLENGEADHLLELSSQELGEKPIPEGNELFCFGPNDP
TEFDKSLWAARHQFTAVSASRFSVLHRKRVFVFTNDEDPSRGSGAIRKQC
ESQMKDLYDMGASVYVSILLRPNQLTDSAVNDEITSTEFFTNLIYLDEDT
ANNDKGDVTIATVHSFEDLRSRVRRKEMTKRAFRRTVLVLGPSYRIGVMM
YALVRKAVRPQKVELVASTKKPVFKITTNTCDSGGTTLKPEEIRKAFTPP
YLRDTKLATPEISAEVGESELNGDSPNDDNASTVTIPKVHGFTNAEVIKA
KALGKVGIYLYAFRKASLMKPEFNMGSPTFLFPDDSEYIGSTQAFATLLK
CMLRRKVIAIVAVRLSASSGAGMRFAALVPQEEDFADDIEQSVPGGFQLH
YLPYKDDVYTEWRKEMEGLSKEVKVEQKEEELDVELDESESVAVARKMVK
KLELEPYSPNNFLSPDLQRFYTGLENAAGIENTYQPQDELLNPKVTEMQS
RAASEMEELKKLDAGVDFDGDEEAERFGKKSVKRAAEQAEAALQRAAKKK
AAMEEAKQACDDSMYIHRFNEHSLGKLKKPDLQLYCRAHGLPEKGNKDNL
IILIEDDIQKHLDAANGNQDMN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006164Ku70/Ku80_beta-barrel_dom
IPR036465vWFA_dom_sf
IPR006165Ku70
IPR005160Ku_C
IPR027388Ku70_bridge/pillars_dom_sf
IPR016194SPOC-like_C_dom_sf
IPR005161Ku_N