Gcaud1322.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1322.t1
Unique NameGcaud1322.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length259
Homology
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A2V3IKM7_9FLOR (ATP synthase protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM7_9FLOR)

HSP 1 Score: 290 bits (743), Expect = 7.550e-96
Identity = 168/262 (64.12%), Postives = 191/262 (72.90%), Query Frame = 0
Query:    2 MSYAFTQLVVLGNN-GNKASSWTKCLKKAFVRVSRHNGSQASCGRSRQTVQANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGPQRLTKDIGKEAQRSILRSDRQPG----NKQSGVAKTVDQTKREGEDSEADLEQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFFSYKVAVLIPLLTGEAFD 258
            M  AF+Q V +    GN+   WT   K        +  S      +RQ +QANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGP RL KDI KEAQRSILRSD + G     KQS     +D     G D EADL QY  LRNKL+ DTLFVGALGLC +W++ +IKEVQSF VGL GS+AYV+LL RSVDRLGESAR  G G   SLQPARIAIL LL++ +AKNSQYLSV+PVL GFF+YKVA+LIPL+TGEAF+
Sbjct:    1 MVVAFSQFVPVNTCCGNR---WTNSTKLLGAAPKGNTCSPNGGNGNRQIIQANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGPGRLKKDITKEAQRSILRSDCRAGPQSVEKQSAGGDKMDTKDMRG-DREADLTQYTVLRNKLLADTLFVGALGLCGVWSIATIKEVQSFTVGLCGSMAYVALLGRSVDRLGESARTTGTGIGVSLQPARIAILALLIVGAAKNSQYLSVIPVLIGFFTYKVALLIPLITGEAFE 258          
BLAST of Gcaud1322.t1 vs. uniprot
Match: R7Q4B7_CHOCR (Putative ATP synthase protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4B7_CHOCR)

HSP 1 Score: 245 bits (626), Expect = 3.920e-78
Identity = 133/212 (62.74%), Postives = 167/212 (78.77%), Query Frame = 0
Query:   47 RQTVQANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGPQRLTKDIGKEAQRSILRSDRQPGNKQSGVAKTVDQTKREGEDSEADLEQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFFSYKVAVLIPLLTGEAFD 258
            R  + ANSLE+SKRRA+SQYDNIPDLNQ+Y++EL WVERKYGP+RL K I KEAQ+SILR D       S   K +++   +G + EADLEQY  +R++L+ +T+FVG LG C  W  G++KEVQSF +GL+GS+AYV LLSRSVDR+  +AR+ G  + D+LQPAR+AILVLLVIASAKNS  LSV+PVL GFF+YKVA L+PLLTGEAF+
Sbjct:   47 RTIISANSLEESKRRARSQYDNIPDLNQRYISELGWVERKYGPKRLKKKIIKEAQQSILRPDGPSAPSASRTTK-IEEPGSDG-NGEADLEQYNRIRSELLVNTIFVGMLGFCVAWGFGTVKEVQSFMMGLVGSMAYVYLLSRSVDRMATAARETGTMSGDALQPARLAILVLLVIASAKNSDKLSVLPVLFGFFTYKVATLLPLLTGEAFE 256          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A7S0T797_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T797_9RHOD)

HSP 1 Score: 103 bits (257), Expect = 1.220e-23
Identity = 56/123 (45.53%), Postives = 83/123 (67.48%), Query Frame = 0
Query:  136 LEQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFFSYKVAVLIPLLTGEAFD 258
            L++Y  LR +L+ DT+ +G +G   I+  GS++   SF VG++GS AYV LLSRSVD+L  +ARQ G+ +AD L  AR+ +L + ++   KN +YL V+P L GFF+YK+  L+P+  GE  D
Sbjct:   46 LDKYNQLRLQLILDTVTLGLVGCFGIYASGSLRTSMSFGVGVVGSTAYVFLLSRSVDKLATAARQ-GQRSADILSGARLLLLGVCILFVVKNREYLDVLPALIGFFTYKLCTLLPVFFGEPGD 167          
BLAST of Gcaud1322.t1 vs. uniprot
Match: M2XQQ8_GALSU (ATP synthase protein I-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQQ8_GALSU)

HSP 1 Score: 100 bits (250), Expect = 6.350e-22
Identity = 78/213 (36.62%), Postives = 119/213 (55.87%), Query Frame = 0
Query:   47 RQTVQANSLEDSKRRAKSQYD------NIPDLNQQYLAELSWVERKYGPQRL-TKDIGKEAQRSILRSDRQPGNKQSGVAKTVDQTKREGEDSEADLEQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFFSYKVAVLIPLL 252
            RQ ++  +L    ++ K + D      +IP L ++Y AEL++VE K+GP+R  T ++    +  IL                 +Q K + E S   ++QY+ ++  L G TL VGA  +  +  +GS K   S+A GL GS+ YV LLSRSV+RL  S+ Q+ R   D L PAR+AI+ LL++  +K+ + L ++PV  GF +YKVA   PLL
Sbjct:   32 RQGIRTVTLSSISKKDKGKNDWGFRPPDIPTLEERYRAELAYVEEKFGPKRYETPELRDPLKTRIL----------------TNQEKAKQERSRG-IKQYQDIKRILFGATLGVGAFLIPLLGWLGSGKIACSYAFGLGGSLIYVWLLSRSVERLASSSTQSFR---DWLGPARLAIVALLILTVSKHREELELLPVFLGFLTYKVATFFPLL 224          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A7S0QQT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QQT9_9CRYP)

HSP 1 Score: 80.1 bits (196), Expect = 7.500e-14
Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 0
Query:  136 LEQYKALRNKLVGDTLFVGALGL--CAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFF-SYKVAVLIP 250
            ++ Y+ L+ +L+ DT F+GAL L  C +W     K+  S+ +G++GS++Y  LL+R+ D LGE    + +  + +  PAR  IL LL++A AKN + L ++P+L GFF  YK+A L P
Sbjct:  126 MDNYEELKKELLNDTAFIGALSLLLCYMWLPE--KQSLSYFIGMIGSLSYSFLLTRTADSLGEQGNSSPQFASGT--PARFLILFLLILAFAKNRETLDILPMLGGFFIPYKLASLRP 239          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A7J7CEM8_TRIWF (Uncharacterized protein n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CEM8_TRIWF)

HSP 1 Score: 67.8 bits (164), Expect = 1.730e-9
Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 0
Query:  138 QYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNS--------QYLSVVPVLAGFFSYKVA 246
            QY  L+NKL   TL +G +GL + +   S +   SF VGLLGS+AY+ +L  SVD + + A+   +G A   QP  +  + L+++ +  N          +L ++P+L GFF+YK+A
Sbjct:  204 QYFKLKNKLHMLTLGIGGVGLVSAYVSYSPEVAASFGVGLLGSLAYMRMLGNSVDSMADGAKGLVKGAA--AQPRLLVPVALVMVFNRWNGILVPEYGFMHLDLIPMLVGFFTYKIA 318          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A0K9QEW8_SPIOL (Uncharacterized protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QEW8_SPIOL)

HSP 1 Score: 65.5 bits (158), Expect = 3.980e-9
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  137 EQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNS--------QYLSVVPVLAGFFSYKVA 246
            EQY  L+NKL   T+ +G +GL + +   + +   SF VG LGS+AY+ +LS SVD +  S  ++    A   QP  +  +VL++I +  N          +L ++P+L GFF+YK+A
Sbjct:   85 EQYYKLKNKLQQLTVGIGGVGLVSAYVSYTPEIAISFGVGFLGSLAYIRMLSNSVDSMASSGSRSMIKAAVG-QPRLLVPVVLVMIFNRWNGIAVPEYGLMHLDLIPMLVGFFTYKIA 201          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A6J1I585_CUCMA (uncharacterized protein LOC111469729 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1I585_CUCMA)

HSP 1 Score: 66.2 bits (160), Expect = 5.860e-9
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  137 EQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNS--------QYLSVVPVLAGFFSYKVA 246
            EQY  L+ KL   TL +G +GL + +   S +   SF  GL+GS+ YV +L  SVD L + AR   +G     QP  +  ++L+++ +  N           L ++P+L GFF+YKVA
Sbjct:  204 EQYFKLKKKLQTLTLAIGGVGLVSAYVSYSPEVAASFGAGLIGSLVYVRMLGSSVDSLADGARGLVKGAV--AQPRLLVPVILVMVYNRWNGILVEDYGVMQLQLIPMLVGFFTYKVA 319          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A097PRL2_HOUCO (ATP synthase protein I-related protein (Fragment) n=1 Tax=Houttuynia cordata TaxID=16752 RepID=A0A097PRL2_HOUCO)

HSP 1 Score: 65.9 bits (159), Expect = 6.190e-9
Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  137 EQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNS--------QYLSVVPVLAGFFSYKVA 246
            EQY  L+ +L   TL +G +G+ + +   S++   SF  GLLGS+ Y+ +L  +VD + + AR   +G A   QP  +  +VL+++ +  N          +L ++P+L GFF+YKVA
Sbjct:  171 EQYFRLKKRLQLLTLGIGGVGMVSAYFSYSLEIAASFGAGLLGSLVYIRMLGNTVDSMADGARGLVKGAAG--QPRLLVPVVLVMVYNKWNGILVPDYGFMHLDLIPMLVGFFTYKVA 286          
BLAST of Gcaud1322.t1 vs. uniprot
Match: A0A7I8KX20_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KX20_SPIIN)

HSP 1 Score: 65.9 bits (159), Expect = 9.040e-9
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 0
Query:  137 EQYKALRNKLVGDTLFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQNGRGTADSLQPARIAILVLLVIASAKNS--------QYLSVVPVLAGFFSYKVA 246
            E+Y  L+ KL   TL +G +G+ + +   S +   SF VGLLGS+AY+ +LS +VD + + A+   +G A   QP  +  + L+++ +  N          +L ++P+L GFF+YK+A
Sbjct:  238 EKYFKLKKKLQLVTLGIGGVGVVSAYVSYSPEIAASFGVGLLGSLAYIRMLSNTVDSMADGAKGLVKGAAG--QPRLLVPVALVMVYNRWNEILVPDYGVMHLDLIPMLVGFFTYKIA 353          
The following BLAST results are available for this feature:
BLAST of Gcaud1322.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKM7_9FLOR7.550e-9664.12ATP synthase protein I n=1 Tax=Gracilariopsis chor... [more]
R7Q4B7_CHOCR3.920e-7862.74Putative ATP synthase protein n=1 Tax=Chondrus cri... [more]
A0A7S0T797_9RHOD1.220e-2345.53Hypothetical protein n=2 Tax=Erythrolobus madagasc... [more]
M2XQQ8_GALSU6.350e-2236.62ATP synthase protein I-like protein n=1 Tax=Galdie... [more]
A0A7S0QQT9_9CRYP7.500e-1439.83Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7CEM8_TRIWF1.730e-935.90Uncharacterized protein n=2 Tax=Tripterygium wilfo... [more]
A0A0K9QEW8_SPIOL3.980e-935.59Uncharacterized protein n=2 Tax=Spinacia oleracea ... [more]
A0A6J1I585_CUCMA5.860e-935.59uncharacterized protein LOC111469729 n=3 Tax=Cucur... [more]
A0A097PRL2_HOUCO6.190e-933.90ATP synthase protein I-related protein (Fragment) ... [more]
A0A7I8KX20_SPIIN9.040e-933.90Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..120
NoneNo IPR availablePANTHERPTHR34118NF-KAPPA-B INHIBITOR-LIKE PROTEIN-RELATEDcoord: 100..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..252
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 253..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..169
NoneNo IPR availableTMHMMTMhelixcoord: 170..187
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 146..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_371_length_28318_cov_4.596486contigNODE_371_length_28318_cov_4.596486:22206..22982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1322.t1Gcaud1322.t1Gracilaria caudata M_176_S67 malemRNANODE_371_length_28318_cov_4.596486 22206..22982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1322.t1 ID=Gcaud1322.t1|Name=Gcaud1322.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=259bp
MMSYAFTQLVVLGNNGNKASSWTKCLKKAFVRVSRHNGSQASCGRSRQTV
QANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGPQRLTKDIGKEA
QRSILRSDRQPGNKQSGVAKTVDQTKREGEDSEADLEQYKALRNKLVGDT
LFVGALGLCAIWTVGSIKEVQSFAVGLLGSIAYVSLLSRSVDRLGESARQ
NGRGTADSLQPARIAILVLLVIASAKNSQYLSVVPVLAGFFSYKVAVLIP
LLTGEAFD*
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