Gcaud9977.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9977.t1
Unique Name	Gcaud9977.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	401

Homology

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BLAST of Gcaud9977.t1 vs. uniprot
Match: A0A2V3IU73_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU73_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 1.470e-71
Identity = 180/448 (40.18%), Postives = 228/448 (50.89%), Query Frame = 0

Query:    1 MLKPGPKAQLQNAKRYAVTLASIGSLRHQDLVAATNEIGCERRIGAENIAYNYDKGDIAFSCVQQWENSPAHLGNILKDDFDEVVVGFYKAPNGRVYCVQTFAVTSRTFSKHGGHMAQC-------------ESVSVQEKPTQEVLN--VQNDENIEEKAINEKKHAEPGDP-----------IMSEEEVLESQEHPALQQEDGQSSDSDTETAYSTVKDFEAGE--------SEADGNTESF--AAVSNENQAKITINISAD-----------EGHYLNEYVQEA----RSELNDHAESIGMEEFTEGDESKQREVEEHEASETAIATEDHDSLEVDDQDPQDHENEKEDIVDRPMANEMKKSKRKRETKKTNVGNRACRCLELGERCWHSLGKQTDELCTPFLATKKQPTACKLKCCSHCLTKSKSRRCTNKVVKRLCRKMRKIIE 397
            +L+PGPK+QLQNAKRYA+ L  IG L HQDL  A+NE+ C R I  ENIAYNY+ GD AFSCVQQWE S  HL NILKD+ DEVVVGFYK  NGRVYCVQTF+      S      ++C             +  S  E+ T  V++    N+ N ++    EK H +   P             SE E    ++H       G       ET++S  +D +  E        S  DG    F  AAV       I   I A            EG   N+ + +A      + ND AE    E F            EH         E+H +L+  D+D +  +N          A   KK+       + ++G+ ACRCLE+G+RCWHSLGK T   CTP L TKKQP++CKLKCCS+CL K KSRRCTNKVVKRLC+KM +II+
Sbjct:   89 ILQPGPKSQLQNAKRYALDLGRIGRLVHQDLTVASNEVKCSRMILGENIAYNYENGDFAFSCVQQWEASQGHLQNILKDNIDEVVVGFYKDANGRVYCVQTFSAIKGETSSETPKGSECGRVGDSSGGSALEDDTSKSEQQTNPVVSNEAMNNTNNQKNERGEK-HEDQNVPKEENSSGYLKQTNSEVEQNIYEQHQYETDSTGSEETLKQETSFS--EDVQVAENKNHVDPLSSGDGTESEFHIAAVEENENTDIREGIDAPNTSNDMSTIHLEGSISNDDILDATVQNEEDKNDGAEIAATEGF------------EH------TLPENHSTLKPPDKDMEAKQN---------GARSKKKAFFDENKGEESIGHGACRCLEVGKRCWHSLGKLTAHTCTPSLPTKKQPSSCKLKCCSYCLAKPKSRRCTNKVVKRLCKKMSRIID 506

The following BLAST results are available for this feature:

BLAST of Gcaud9977.t1 vs. uniprot

BLAST of Gcaud9977.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IU73_9FLOR	1.470e-71	40.18	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 8..106 e-value: 5.3E-11 score: 44.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 12..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..210
None	No IPR available	CDD	cd05379	CAP_bacterial	coord: 11..103 e-value: 4.83401E-14 score: 66.2493

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_473_length_24485_cov_4.886325	contig	NODE_473_length_24485_cov_4.886325:5952..7154 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9977.t1	Gcaud9977.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_473_length_24485_cov_4.886325 5952..7154 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9977.t1 ID=Gcaud9977.t1|Name=Gcaud9977.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=401bp
MLKPGPKAQLQNAKRYAVTLASIGSLRHQDLVAATNEIGCERRIGAENIA
YNYDKGDIAFSCVQQWENSPAHLGNILKDDFDEVVVGFYKAPNGRVYCVQ
TFAVTSRTFSKHGGHMAQCESVSVQEKPTQEVLNVQNDENIEEKAINEKK
HAEPGDPIMSEEEVLESQEHPALQQEDGQSSDSDTETAYSTVKDFEAGES
EADGNTESFAAVSNENQAKITINISADEGHYLNEYVQEARSELNDHAESI
GMEEFTEGDESKQREVEEHEASETAIATEDHDSLEVDDQDPQDHENEKED
IVDRPMANEMKKSKRKRETKKTNVGNRACRCLELGERCWHSLGKQTDELC
TPFLATKKQPTACKLKCCSHCLTKSKSRRCTNKVVKRLCRKMRKIIENEL
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035940	CAP_sf