Gcaud9881.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9881.t1
Unique NameGcaud9881.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length157
Homology
BLAST of Gcaud9881.t1 vs. uniprot
Match: R7Q7F1_CHOCR (UBC core domain-containing protein n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7Q7F1_CHOCR)

HSP 1 Score: 288 bits (736), Expect = 2.590e-98
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0
Query:   20 MRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVEC 156
            MRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNE YPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCA KSVEC
Sbjct:    1 MRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEQYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCASKSVEC 137          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A1X6NLU3_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLU3_PORUM)

HSP 1 Score: 273 bits (697), Expect = 4.540e-92
Identity = 131/155 (84.52%), Postives = 142/155 (91.61%), Query Frame = 0
Query:    1 MSQSSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            MS SS + ARLRLM+DLK M QEPPEGCSASPLSEENLFVWGATIFGP E+ WEGGVY+LRLTF+E YPEKPPRVRFT +MFHPNVY+DGTLCLDIIQD+WSPIYTVNTILTSIQSLLTDPN SSPANPEAAQL+N D +AYKK+VRRCA KSVE
Sbjct:    1 MSGSSATPARLRLMSDLKSMMQEPPEGCSASPLSEENLFVWGATIFGPLESLWEGGVYALRLTFSEQYPEKPPRVRFTCQMFHPNVYSDGTLCLDIIQDRWSPIYTVNTILTSIQSLLTDPNASSPANPEAAQLFNTDMDAYKKRVRRCAAKSVE 155          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A5J4YMD8_PORPP (Ubiquitin-conjugating enzyme E2 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMD8_PORPP)

HSP 1 Score: 268 bits (686), Expect = 2.470e-90
Identity = 127/154 (82.47%), Postives = 137/154 (88.96%), Query Frame = 0
Query:    2 SQSSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            S S  SA+RLRLMTDLK+M QEPP+GCSASPLSE NLFVWGATIFGP ETPWEGGVYSLRLTF E YPEKPPRVRFT EMFHPNVY+DGTLCLDIIQDKWSPIYTVN+ILTSIQSLLTDPNP SPAN EAAQ++     AY K+VRRCAQKS++
Sbjct:    7 SGSRMSASRLRLMTDLKMMNQEPPDGCSASPLSESNLFVWGATIFGPSETPWEGGVYSLRLTFTEQYPEKPPRVRFTCEMFHPNVYSDGTLCLDIIQDKWSPIYTVNSILTSIQSLLTDPNPLSPANTEAAQMFTTSLEAYNKRVRRCAQKSLD 160          
BLAST of Gcaud9881.t1 vs. uniprot
Match: M2Y7H2_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7H2_GALSU)

HSP 1 Score: 267 bits (682), Expect = 7.920e-90
Identity = 121/150 (80.67%), Postives = 139/150 (92.67%), Query Frame = 0
Query:    7 SAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVEC 156
            S ++LRLMTDLKLM+QEPPEGCSASPLS++NLFVWGATIFGPP+T WEGG+Y+LRLTF+E YP+KPPRVRFT +MFHPNVY DGTLCLDIIQD WSPIYTVNTILTSIQSLLTDPNP+SPANPEAA L+  ++ AYK+KVR+ AQ+SVEC
Sbjct:    5 SRSKLRLMTDLKLMKQEPPEGCSASPLSDDNLFVWGATIFGPPDTAWEGGIYTLRLTFSEEYPDKPPRVRFTCDMFHPNVYQDGTLCLDIIQDHWSPIYTVNTILTSIQSLLTDPNPASPANPEAAHLFTTNKEAYKQKVRKIAQRSVEC 154          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A830H5G5_9CHLO (UBC core domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H5G5_9CHLO)

HSP 1 Score: 253 bits (646), Expect = 2.520e-84
Identity = 115/155 (74.19%), Postives = 139/155 (89.68%), Query Frame = 0
Query:    1 MSQSSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            M+ SS SAA+LRLM+DLK +RQ PPEGCSASP S++NLFVW ATIFGP ETPWEGG++SLR+TF EHYPEKPPRVRFT +MFHPNVYTDGTLCLD++QD+WSP + V+++LTSIQSLLTDPNP+SPANP+AAQLY  DR AY ++VRR ++KS+E
Sbjct:    1 MAASSQSAAQLRLMSDLKSIRQSPPEGCSASPHSDDNLFVWNATIFGPDETPWEGGIFSLRITFGEHYPEKPPRVRFTTDMFHPNVYTDGTLCLDLLQDQWSPCHNVSSLLTSIQSLLTDPNPASPANPDAAQLYQNDRPAYDQRVRRLSRKSLE 155          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A2R6XAS7_MARPO (UBC core domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XAS7_MARPO)

HSP 1 Score: 252 bits (644), Expect = 4.910e-84
Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = 0
Query:    7 SAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVEC 156
            S+A+LRLM+DLK +RQEPPEGCSASP  EENLFVWGATIFGP ETPWEGG++SLRL F EHYPEKPPRVRFT+++FHPNVY+DGTLC+DIIQD WSP + + TILTSIQSLLTDPNP+SPANPEAA LY  D  AY +KVR C +KS+EC
Sbjct:    3 SSAQLRLMSDLKAIRQEPPEGCSASPYGEENLFVWGATIFGPDETPWEGGIFSLRLIFGEHYPEKPPRVRFTSDVFHPNVYSDGTLCMDIIQDAWSPCHNICTILTSIQSLLTDPNPASPANPEAASLYQNDILAYNRKVRLCVRKSLEC 152          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A7S3F373_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma TaxID=156132 RepID=A0A7S3F373_9VIRI)

HSP 1 Score: 251 bits (640), Expect = 2.000e-83
Identity = 113/153 (73.86%), Postives = 137/153 (89.54%), Query Frame = 0
Query:    4 SSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVEC 156
            ++ +AA LRL  DLK + QEPP GCSASP S++N+FVW ATIFGP ETPWEGGV+SLR+TF+E+YP KPPRVRFT+E+FHPNVY+DGTLCLDIIQD+WSP++ + TIL+SIQSLL DPNP+SPANPEAAQLY+ D+ AYKK+VRRCAQKS+EC
Sbjct:    2 ANATAAMLRLAADLKAINQEPPSGCSASPNSDDNMFVWSATIFGPDETPWEGGVFSLRITFSENYPGKPPRVRFTSEVFHPNVYSDGTLCLDIIQDQWSPVHNICTILSSIQSLLGDPNPNSPANPEAAQLYSHDKAAYKKRVRRCAQKSIEC 154          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A5B7CAY7_DAVIN (Putative ubiquitin-conjugating enzyme E2 1-like n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CAY7_DAVIN)

HSP 1 Score: 250 bits (638), Expect = 3.900e-83
Identity = 115/149 (77.18%), Postives = 134/149 (89.93%), Query Frame = 0
Query:    7 SAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            S+A+LRLM+DLK++ +EPPEGCSA PLSE+NLFVW ATIFGP ETPWEGGV+SLRLTF E+YPEKPPRVRFT+EMFHPNV+ DG LC+DIIQD WSP + V+TILTSIQSLLTDPNP+SPANPEAAQLY  D  AY K+VR+CA++SVE
Sbjct:    3 SSAQLRLMSDLKVITKEPPEGCSAGPLSEDNLFVWSATIFGPDETPWEGGVFSLRLTFGENYPEKPPRVRFTSEMFHPNVFHDGRLCMDIIQDAWSPCHNVSTILTSIQSLLTDPNPASPANPEAAQLYQHDIQAYNKRVRKCARRSVE 151          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A0K9RXZ1_SPIOL (UBC core domain-containing protein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K9RXZ1_SPIOL)

HSP 1 Score: 249 bits (637), Expect = 6.120e-83
Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    4 SSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            SS S+++LRLM+DLK +  EPPEGCSASP+S+ENLFVW ATIFGP ETPWEGGV+SLRLTF ++YPEKPPRVRFT+++FHPNVY DGTLC+DIIQD WSP + V TILTSIQSLLTDPNPSSPANPEAAQL+  D  AY K+VRRCA+KS E
Sbjct:    3 SSSSSSQLRLMSDLKSIINEPPEGCSASPMSDENLFVWSATIFGPDETPWEGGVFSLRLTFTDNYPEKPPRVRFTSDIFHPNVYHDGTLCMDIIQDAWSPCHNVATILTSIQSLLTDPNPSSPANPEAAQLFQHDNPAYNKRVRRCARKSTE 154          
BLAST of Gcaud9881.t1 vs. uniprot
Match: A0A7S3DYK2_9CHLO (Hypothetical protein n=3 Tax=Chloropicon TaxID=2302914 RepID=A0A7S3DYK2_9CHLO)

HSP 1 Score: 248 bits (634), Expect = 1.590e-82
Identity = 112/149 (75.17%), Postives = 134/149 (89.93%), Query Frame = 0
Query:    7 SAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPETPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDKWSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCAQKSVE 155
            SAA LRL++DLK ++QEPPEGCSASP+SE+NLFVW AT+FGP ETPWEGGV+SLR+ F++ YPEKPPRVRFT+E++HPNVY+DGTLC+DIIQD+WSP + + TILTSIQSLL DPNP+SPANPEAAQ Y  DR +Y KKVRRCAQ+SVE
Sbjct:    3 SAATLRLLSDLKSIKQEPPEGCSASPVSEDNLFVWNATVFGPDETPWEGGVFSLRIIFSDSYPEKPPRVRFTSEVYHPNVYSDGTLCMDIIQDQWSPCHNICTILTSIQSLLCDPNPASPANPEAAQQYQNDRQSYNKKVRRCAQRSVE 151          
The following BLAST results are available for this feature:
BLAST of Gcaud9881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q7F1_CHOCR2.590e-9898.54UBC core domain-containing protein n=2 Tax=Rhodyme... [more]
A0A1X6NLU3_PORUM4.540e-9284.52UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A5J4YMD8_PORPP2.470e-9082.47Ubiquitin-conjugating enzyme E2 2 n=1 Tax=Porphyri... [more]
M2Y7H2_GALSU7.920e-9080.67Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A830H5G5_9CHLO2.520e-8474.19UBC core domain-containing protein n=2 Tax=Pycnoco... [more]
A0A2R6XAS7_MARPO4.910e-8476.67UBC core domain-containing protein n=1 Tax=Marchan... [more]
A0A7S3F373_9VIRI2.000e-8373.86Hypothetical protein n=2 Tax=Prasinoderma TaxID=15... [more]
A0A5B7CAY7_DAVIN3.900e-8377.18Putative ubiquitin-conjugating enzyme E2 1-like n=... [more]
A0A0K9RXZ1_SPIOL6.120e-8376.32UBC core domain-containing protein n=6 Tax=Mesangi... [more]
A0A7S3DYK2_9CHLO1.590e-8275.17Hypothetical protein n=3 Tax=Chloropicon TaxID=230... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 11..155
e-value: 7.4E-69
score: 244.8
NoneNo IPR availablePANTHERPTHR24067:SF292UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEINcoord: 7..155
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 7..155
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..149
e-value: 2.1E-51
score: 173.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 8..155
score: 53.594807
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 12..150
e-value: 9.59856E-67
score: 197.425
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 5..156
e-value: 1.1E-62
score: 212.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..154
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 82..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_428_length_25911_cov_4.217002contigNODE_428_length_25911_cov_4.217002:2291..2761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9881.t1Gcaud9881.t1Gracilaria caudata M_176_S67 malemRNANODE_428_length_25911_cov_4.217002 2291..2761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9881.t1 ID=Gcaud9881.t1|Name=Gcaud9881.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=157bp
MSQSSPSAARLRLMTDLKLMRQEPPEGCSASPLSEENLFVWGATIFGPPE
TPWEGGVYSLRLTFNEHYPEKPPRVRFTAEMFHPNVYTDGTLCLDIIQDK
WSPIYTVNTILTSIQSLLTDPNPSSPANPEAAQLYNADRNAYKKKVRRCA
QKSVEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS