Gcaud9870.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9870.t1
Unique NameGcaud9870.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length112
Homology
BLAST of Gcaud9870.t1 vs. uniprot
Match: R7QD96_CHOCR (60S ribosomal protein L30 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QD96_CHOCR)

HSP 1 Score: 199 bits (505), Expect = 2.970e-64
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
Query:    1 MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDNVFLNSES 111
            M K KKK TENVN RLALVVKSGKYTLG+KSTI+TLR+GKAKLILIASN +PL+KSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEID+VFLN ES
Sbjct:    1 MVKAKKKTTENVNARLALVVKSGKYTLGFKSTIKTLRSGKAKLILIASNTAPLRKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDSVFLNQES 111          
BLAST of Gcaud9870.t1 vs. uniprot
Match: Q7XYA1_GRIJA (Ribosome protein L30 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA1_GRIJA)

HSP 1 Score: 182 bits (461), Expect = 1.530e-57
Identity = 90/111 (81.08%), Postives = 100/111 (90.09%), Query Frame = 0
Query:    1 MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDNVFLNSES 111
            M K KKKNTENVN RLALVV+SGKYTLG+KSTI+TLRTGKAKLILI+SN +PL+KSELEYYAML+KC VHHF GNN +LGTACGRYFR SAMAITDPGDS+ID+VFL   S
Sbjct:    1 MVKSKKKNTENVNARLALVVRSGKYTLGFKSTIKTLRTGKAKLILISSNTAPLRKSELEYYAMLSKCPVHHFVGNNNELGTACGRYFRCSAMAITDPGDSDIDSVFLQQTS 111          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A8H8S398_9HELO (60S ribosomal protein L30 n=2 Tax=Lachnellula TaxID=47830 RepID=A0A8H8S398_9HELO)

HSP 1 Score: 155 bits (392), Expect = 4.580e-47
Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 0
Query:    1 MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            MA  KKKN E +N RLALV+KSGK TLGYKST++TLR+GKAKL++IA N  PL+KSELEYYAMLAKC VHHF GNNI+LGTACG+ FR S MA+ D GDS+I
Sbjct:    1 MAPAKKKNAEGINSRLALVIKSGKVTLGYKSTLKTLRSGKAKLVIIAGNTPPLRKSELEYYAMLAKCNVHHFAGNNIELGTACGKMFRCSTMAVLDAGDSDI 102          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A6U4SJ86_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4SJ86_HEMAN)

HSP 1 Score: 152 bits (384), Expect = 8.570e-46
Identity = 69/97 (71.13%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    6 KKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            KKN E++N RLALV+KSGKYTLGYKST++TLR+GK+KL++I SN  PL+KSE+EYYAMLAK  VHH+ GNN+DLGTACG+ FR S+++ITDPGDS+I
Sbjct:    8 KKNAESINSRLALVMKSGKYTLGYKSTLKTLRSGKSKLVIICSNCPPLRKSEIEYYAMLAKTHVHHYTGNNVDLGTACGKLFRVSSLSITDPGDSDI 104          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A1X6NUW6_PORUM (Ribosomal_L7Ae domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUW6_PORUM)

HSP 1 Score: 151 bits (382), Expect = 1.730e-45
Identity = 74/102 (72.55%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    1 MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            MAK KKK++ N+  RLALV+KSGKY+LGYKSTI+TLR+ K KL+LIASN  PL++SELEYYAMLAKC VHH+ GNN+DLGTACG+YFR SA+ ITD GDS+I
Sbjct:    1 MAK-KKKSSNNLGARLALVMKSGKYSLGYKSTIKTLRSDKCKLVLIASNTPPLRRSELEYYAMLAKCNVHHYPGNNVDLGTACGKYFRCSALGITDQGDSDI 101          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A0D2NS00_9CHLO (60S ribosomal protein L30 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2NS00_9CHLO)

HSP 1 Score: 151 bits (381), Expect = 2.380e-45
Identity = 69/101 (68.32%), Postives = 89/101 (88.12%), Query Frame = 0
Query:    2 AKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            +K  KK+ EN+N RLALV+KSGKYTLGYK+ ++TLR+GKAKLI+++SN  P++KSE+EYYAML+K  VHH+ GNN+DLGTACG+YFR S +AITDPGDS+I
Sbjct:    6 SKKTKKSQENINSRLALVMKSGKYTLGYKTCLKTLRSGKAKLIIVSSNCPPVRKSEIEYYAMLSKTGVHHYTGNNVDLGTACGKYFRVSVLAITDPGDSDI 106          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A383V3I6_TETOB (Ribosomal_L7Ae domain-containing protein n=4 Tax=Sphaeropleales TaxID=35491 RepID=A0A383V3I6_TETOB)

HSP 1 Score: 151 bits (381), Expect = 2.460e-45
Identity = 68/101 (67.33%), Postives = 89/101 (88.12%), Query Frame = 0
Query:    2 AKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            +K  KK+ EN+N RLALV+KSGKYTLGYK+ ++TLR+GKAKL++++SN  P++KSE+EYYAML+K  VHH+ GNN+DLGTACG+YFR S +AITDPGDS+I
Sbjct:    5 SKKTKKSQENINSRLALVMKSGKYTLGYKTCLKTLRSGKAKLVIVSSNCPPVRKSEIEYYAMLSKTGVHHYSGNNVDLGTACGKYFRVSVLAITDPGDSDI 105          
BLAST of Gcaud9870.t1 vs. uniprot
Match: UPI001E1E15D1 (60S ribosomal protein L30 n=2 Tax=Autobranchia TaxID=2785011 RepID=UPI001E1E15D1)

HSP 1 Score: 151 bits (381), Expect = 2.610e-45
Identity = 71/101 (70.30%), Postives = 86/101 (85.15%), Query Frame = 0
Query:    2 AKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            AK  KK+ EN+N RLALV+KSGKY LGYK T++TLR GKAKL++IASN  PL+KSE+EYYAMLAK  VHH+ GNNI+LGTACG+YFR   ++ITDPGDS+I
Sbjct:    4 AKKTKKSIENINSRLALVMKSGKYVLGYKQTLKTLRQGKAKLVIIASNTPPLRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLSITDPGDSDI 104          
BLAST of Gcaud9870.t1 vs. uniprot
Match: A0A0F0I2N1_ASPPU (Ribosomal_L7Ae domain-containing protein n=51 Tax=Aspergillus TaxID=5052 RepID=A0A0F0I2N1_ASPPU)

HSP 1 Score: 150 bits (380), Expect = 2.900e-45
Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 0
Query:    1 MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            MA   KKN + +N RLALV+KSGK TLGYKSTI+TLR+GKAKL++IA+N  PL+KSELEYYAMLAK  VHHF GNNI+LGTACG+ FRTS MA+ D GDS+I
Sbjct:    1 MAPKSKKNADTINSRLALVMKSGKVTLGYKSTIKTLRSGKAKLVIIAANTPPLRKSELEYYAMLAKAPVHHFSGNNIELGTACGKLFRTSTMAVLDAGDSDI 102          
BLAST of Gcaud9870.t1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 150 bits (380), Expect = 3.490e-45
Identity = 71/100 (71.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:    3 KGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNASPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            K +KK  E++N RLALV+KSGKYTLGYKST+++LR GKAKLI+I++N  PL+KSE+EYYAMLAK  VHH+ GNNIDLGTACG+YFR S+++ITDPGDS+I
Sbjct:    5 KKQKKAQESINSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDI 104          
The following BLAST results are available for this feature:
BLAST of Gcaud9870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QD96_CHOCR2.970e-6489.1960S ribosomal protein L30 n=2 Tax=Rhodymeniophycid... [more]
Q7XYA1_GRIJA1.530e-5781.08Ribosome protein L30 n=1 Tax=Griffithsia japonica ... [more]
A0A8H8S398_9HELO4.580e-4772.5560S ribosomal protein L30 n=2 Tax=Lachnellula TaxI... [more]
A0A6U4SJ86_HEMAN8.570e-4671.13Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A1X6NUW6_PORUM1.730e-4572.55Ribosomal_L7Ae domain-containing protein n=1 Tax=P... [more]
A0A0D2NS00_9CHLO2.380e-4568.3260S ribosomal protein L30 n=1 Tax=Monoraphidium ne... [more]
A0A383V3I6_TETOB2.460e-4567.33Ribosomal_L7Ae domain-containing protein n=4 Tax=S... [more]
UPI001E1E15D12.610e-4570.3060S ribosomal protein L30 n=2 Tax=Autobranchia Tax... [more]
A0A0F0I2N1_ASPPU2.900e-4571.57Ribosomal_L7Ae domain-containing protein n=51 Tax=... [more]
L8GX53_ACACA3.490e-4571.0060S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 11..102
e-value: 2.2E-23
score: 81.8
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..105
e-value: 7.9E-46
score: 156.1
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 10..102
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..102
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 22..46
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 78..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_584_length_21412_cov_4.339853contigNODE_584_length_21412_cov_4.339853:17674..18136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9870.t1Gcaud9870.t1Gracilaria caudata M_176_S67 malemRNANODE_584_length_21412_cov_4.339853 17674..18136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9870.t1 ID=Gcaud9870.t1|Name=Gcaud9870.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=112bp
MAKGKKKNTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNA
SPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDS
EIDNVFLNSES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS