Gcaud986.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud986.t1
Unique NameGcaud986.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length339
Homology
BLAST of Gcaud986.t1 vs. uniprot
Match: R7QLD7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 157 bits (398), Expect = 1.280e-43
Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = 0
Query:  200 FQTEISGDRYNEVWSALSGTTRRRERVQDYGVGRSNKPVAGNELITELEQDLSAINRKYLYIPGQAIFSLDDDHERLRLKAVTEITTLSHVNNPKKALEPVNNALCSALSSAFLACHYSRPQEKIIH 326
            F+ +ISG RY EVWSALSGT R+RE  +    G  NKPVAGN LIT +E +L+AINR+ +++ G  I+S+DDDH RL  +AV  +T LS V NPKKAL PVNNA CSAL+ AF+A HYSRP EKI H
Sbjct:   18 FRCKISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITH 144          
BLAST of Gcaud986.t1 vs. uniprot
Match: A0A2V3IV24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 6.060e-30
Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 0
Query:  136 VFDVFLPPFLLEKLWAYVNRVLGKRKKPPVTAIELKRVITTHVLAASYGTIVSIMTSLEQRESYFQTEISGDRYNEVWSALSGTTRRRERVQDYG---VGRSNKPVAGN 241
            VFDVF P  LL KL +YVNRVL  RK+ P T +E K +I  HVLAASYGT VS+MT  E  E Y+QT I G RY E+W+AL GT +R +R + YG    G  NKPV GN
Sbjct:    3 VFDVFFPTSLLGKLRSYVNRVLSARKEKPTTVMEFKGIIVNHVLAASYGTTVSVMTYTESEEFYYQTGILGKRYAEIWAALRGTKKRPQRAEVYGNSEKGWFNKPVVGN 111          
BLAST of Gcaud986.t1 vs. uniprot
Match: R7Q906_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 75.9 bits (185), Expect = 9.710e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  246 ELEQDLSAINRKYLYIPGQAIFSLDDDHERLRLKAVTEITTLSHVNNPKKALEPVNNALCSALSSAF 312
            E+E + +AINR+ LYIP   +FSLDDDH R+   A+  +T L  +NN KK+L P++NALCSAL+  F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68          
The following BLAST results are available for this feature:
BLAST of Gcaud986.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7QLD7_CHOCR1.280e-4360.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IV24_9FLOR6.060e-3056.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q906_CHOCR9.710e-1452.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2132_length_6711_cov_4.818278contigNODE_2132_length_6711_cov_4.818278:5430..6531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud986.t1Gcaud986.t1Gracilaria caudata M_176_S67 malemRNANODE_2132_length_6711_cov_4.818278 5430..6531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud986.t1 ID=Gcaud986.t1|Name=Gcaud986.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=339bp
MQSREDFHPSNSFDRISNALEAQQTATEDFWSSLFLDPTDLMDEDTLELE
DIETFHSESEHEQRERCAAQRNGGLRECKYDDAFSDVTIKIADVDSFLGE
LFVVESNKILDNVINELRVTEERSLVEDAKLTRIAVFDVFLPPFLLEKLW
AYVNRVLGKRKKPPVTAIELKRVITTHVLAASYGTIVSIMTSLEQRESYF
QTEISGDRYNEVWSALSGTTRRRERVQDYGVGRSNKPVAGNELITELEQD
LSAINRKYLYIPGQAIFSLDDDHERLRLKAVTEITTLSHVNNPKKALEPV
NNALCSALSSAFLACHYSRPQEKIIHTEDIIVRKPLIS*
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