Gcaud9850.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9850.t1
Unique NameGcaud9850.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1144
Homology
BLAST of Gcaud9850.t1 vs. uniprot
Match: A0A2V3IH81_9FLOR (AUGMIN subunit 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH81_9FLOR)

HSP 1 Score: 886 bits (2289), Expect = 3.000e-303
Identity = 611/1192 (51.26%), Postives = 752/1192 (63.09%), Query Frame = 0
Query:    2 TSSFPSPAQLVVENITLLAGSPTSFHARYGFTITPSTFEKPTHFNTAAAVLHFLLCIIEQEAVRHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSVVSAAGGDRFIDLLWSLSSLAVQQACVSHPPYASSSSHLPSHPVHQXXXXXXXXXXXXXXXXLYSFSR----------AANSSATSKPPPSRRFLGMGMVTAAQQRAQNAQHMRARIDAQRAAMERTAEMGKHAALNWNSEAGSLRDKISDFEAKLRCLKMQLTAMGFDENGNDIRGGDAPQVDSSASCEAAALKTGA-IKASSSADTLXXXXXXXXXXXXXXXXSVGDAVESVDGEALSSDLKRLLTFADETRATREQLCEDL---------DDVPSVNVTDANAQQIAGLVRAATEELQLATDRMDEIRDARREQQKIADVQQSPDEEEELGVSSAADSAVATQSACRPPSA-VAHRTEVDITSSSSTVTDEEKALGEKEKEQASKQLSVSEAQDEDVDPTNPLRACVEDALQKHKAILESSKKLTLEANEFVAKSEAALKLMEPIDSDESVKGDDLPCVT--NNLKPTWFVEASHGAAIIATQLEKNHASQPSTPRNAEEKVSSEKDVQQAAQLLEKSVASRS--KSSTETIRSRRRK-DGS-RSLDCINLTTQSTAKSMDLASDSSSAMLCTPSSLASS-TKTARSVRFAELPPSYSATRSVDDAGVVSSGKPGKMRCAAEIHPSSEPTYASTSTXXXXXXXXXXXXXXXASEDMSKVANDCDKSAPRAGMVPAVENFVNVAKRDVSERPTRARTFTEK-SELQARKDAASGRSRRRDPHMTKNDRSRPITQVTSSRPPRLQRTQTPRRVMRRKDAIERSAVPQQPA---AKPRPPRRTPPRSASVDDLNKLNKCSRPKNKVVLVESDVTSGGRDTSFTTMDVASIPKDSTEGQAQSTSSTSVKNRTNSSKC--------SDDEICN----EGKDGAESLPSSVEECMEDQPMPNA-LENVQKKLFMTPESAGSSSTALDTPGDELDAVERMYGLRKATGAVKNTLTPDKNTAKNAKFDFLQNMTPLPGKGSMNQSGSLSDEDVLFSPATRIPQPQIPNRPKATSSDGFFAGEAAQWQQSVRSQNGTE-----NSTLTRTTSESTSRRSRFTGILSSSSNGSGGKKSRVQLLRARLAALNK 1143
            T + P+PAQL+VEN+TLLAGSP++F ARYG TIT +TF KP+ F  AAAVLHFLL +IE   V+ LFKPCFPILDR QERDFKK+VDARL++LE+NKL+P G ARKSVV+AAGGDRF+DL+W+LS LAVQ ACV HPPYA+ +    S P              XXXXX     R          A+ SS+ S    SRRFLG G++ AA  RA NA  MRA +DAQR AM RT  M +  A   NSEA SLR+KI+DFEAKLRCLKMQL  MGFDENGNDIRGGDAP V+++ +       T + +  S+S+DTL                S+GDAVESVDGE LS+DLKRLL FAD T     QLC DL           VP V VTDA+A  I GLVRAATE+L++A  RMD+I  A +   +         +      S+ A    AT +A       V HR++VDITS+SSTVTDEEKA+ +KE    S Q +  + Q + +  TNPLRA VE AL+KHK +L++S++LT EANEF AKS+A+LKL+EPIDSD S+ G+++PC+   N  KP+WF+EA       A   E+  ASQ    +    +  S  DV+QA+QLLE+SVA+ S  KSS+    +RRRK DGS RS D  N  TQS+ KS DL SDS+S +LCTPSS  SS TKTARSVRFAELPPSYSATRS DD  VV + + GK RC  E++PSS    +S ST                 ED+ K   D DK   R G   AV+    V KR+ +ER  R +T TEK +E Q +K+ +S R+RRRD H  K+D+ RP  QVTS      QRTQTPRRVMRRKDAIERS +P  PA   +KP+     P RS S  + N L +C R ++ V    S   S            + +P  S+       + T +++ T+  +         SDDEI +    + +DGAESL SSVEE  E+ P P A  E VQKKLFMTPES  S ST ++ P +++D+VE+ YGLRKATG VK  L+  +N A  A   FL+N +P   +     SGSLSD+D+LFSP TR+P  Q P RPKATSSDGFFAGEAA WQQSVRSQNGTE        LTRTTSESTSR SR T  LSS+S+ SGGK+SRVQ LRARLAALNK
Sbjct:    3 THALPTPAQLIVENLTLLAGSPSAFRARYGHTITDTTFAKPSSFAPAAAVLHFLLSVIEPSVVQPLFKPCFPILDRAQERDFKKVVDARLSLLEKNKLIPQGAARKSVVAAAGGDRFLDLIWTLSCLAVQHACVRHPPYANPTRFAVSSPPIPDDSASVASSSRXXXXXXXXXXRGKPASARGAAASLSSSASATCASRRFLGAGLIAAAHNRANNATTMRATVDAQRLAMARTVNMAQQGATMCNSEADSLREKITDFEAKLRCLKMQLADMGFDENGNDIRGGDAPPVNTTTAANPTDAPTASQLNTSASSDTLQDELKTSPIESTESGSSLGDAVESVDGEQLSADLKRLLAFADHTAQNGPQLCHDLAAAERAAQAGQVPGVRVTDASAHDIVGLVRAATEQLEVAAHRMDQISAAAQPHHR---------DRTNSTTSTRARRGPATLAASXXXXXXVTHRSDVDITSASSTVTDEEKAINDKEH---SIQKTNQKQQQQHL--TNPLRATVEAALRKHKQVLDNSQRLTKEANEFAAKSDASLKLLEPIDSDGSLMGEEVPCIPSPNTTKPSWFIEA-------AADAERIIASQTQAHQKGRVEHDSASDVRQASQLLERSVAANSSNKSSSVARSARRRKNDGSSRSFDSFNALTQSSTKSADLESDSASLVLCTPSSSTSSATKTARSVRFAELPPSYSATRSGDDT-VVHASRIGKTRCTTELYPSSP---SSLSTV----------------EDVRKSLQDTDKPTSR-GAANAVDTAGVVVKREPAERSARPKTPTEKPTEPQPKKEGSSTRTRRRDQHTPKSDKGRP-PQVTSXXXXXXQRTQTPRRVMRRKDAIERSVIPVAPAVPASKPQAASSIPSRSGSQVNFNGLTEC-RSRSTVATSTSHAAS------------SLLPNPSSPAPEAVQTQTPIEDETSKKQLGHADVPQGSDDEISSAINVDVRDGAESLQSSVEELAEEHPTPLAPRETVQKKLFMTPESTTSFSTPVEPPVEKVDSVEKTYGLRKATGTVKAVLSA-RNGATAANHSFLRNTSPAHARSDSKPSGSLSDDDLLFSPDTRVPLSQKPMRPKATSSDGFFAGEAAHWQQSVRSQNGTEVNMFQEGALTRTTSESTSRFSRLTEKLSSTSSSSGGKRSRVQQLRARLAALNK 1137          
BLAST of Gcaud9850.t1 vs. uniprot
Match: A0A7S3DJU9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DJU9_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 1.550e-10
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 0
Query:   11 LVVENITLLAGSPTSFHARYGFTITPSTFEKPTHFNTAAAVLHFLLCIIEQEAVRHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSVVSAAGGDRFIDLLWSLS-----SLAVQQACVSHPPYA 141
            ++ +N+TLL         R+G  ++   F KP +      ++++LL  +  E     F+  FP +D+ Q+RDF  L  A +  LE+ +LLP GCA +S+ + A G+R   LL+ LS      LA  ++  S  PYA
Sbjct:   47 VIRQNLTLLGFDFADQSKRHGVDLSEDCFNKP-NLKAMQVIIYYLLFKLSPEKTEKDFRHSFPAIDKMQQRDFTSLALAEVTRLEKERLLPPGCASRSLFAHAAGERAYFLLFHLSVHVMKELAGDRSSQSRQPYA 181          
BLAST of Gcaud9850.t1 vs. uniprot
Match: A0A7S2RR81_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR81_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.510e-7
Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 0
Query:   14 ENITLLAGSPTSFHARY--GFTITPSTFEKPTHFNTAAAV-LHFLLCIIEQEAVRHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSVVSAAGGDRFIDLLWSLSSLAV 130
             N+ LL    +  +  Y  G   + S F   T   +A  V LHFL C ++    R +F   FP+ D  Q R+FK      + +LER K++P G AR SV++ A G     L+W L+  A+
Sbjct:    4 RNLALLGFLSSPEYTGYSDGGVFSESMFSTTTSNESALLVILHFLFCALKPGVARKVFSSVFPVRDHSQRREFKVKAREFMQMLEREKVIPVGTARGSVLNMARGKSACVLVWKLTIAAM 123          
The following BLAST results are available for this feature:
BLAST of Gcaud9850.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IH81_9FLOR3.000e-30351.26AUGMIN subunit 6 n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A7S3DJU9_9EUKA1.550e-1032.35Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A7S2RR81_9STRA6.510e-733.33Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 381..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 699..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..959
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..877
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1078..1128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 710..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..826
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1056..1130
IPR028163HAUS augmin-like complex subunit 6, N-terminalPFAMPF14661HAUS6_Ncoord: 14..145
e-value: 4.5E-18
score: 65.7
IPR026797HAUS augmin-like complex subunit 6PANTHERPTHR16151UNCHARACTERIZEDcoord: 48..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1575_length_9670_cov_3.711243contigNODE_1575_length_9670_cov_3.711243:3873..7304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9850.t1Gcaud9850.t1Gracilaria caudata M_176_S67 malemRNANODE_1575_length_9670_cov_3.711243 3873..7304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9850.t1 ID=Gcaud9850.t1|Name=Gcaud9850.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1144bp
MTSSFPSPAQLVVENITLLAGSPTSFHARYGFTITPSTFEKPTHFNTAAA
VLHFLLCIIEQEAVRHLFKPCFPILDRQQERDFKKLVDARLAILERNKLL
PHGCARKSVVSAAGGDRFIDLLWSLSSLAVQQACVSHPPYASSSSHLPSH
PVHQSYDTASTASSSRSQRSLYSFSRAANSSATSKPPPSRRFLGMGMVTA
AQQRAQNAQHMRARIDAQRAAMERTAEMGKHAALNWNSEAGSLRDKISDF
EAKLRCLKMQLTAMGFDENGNDIRGGDAPQVDSSASCEAAALKTGAIKAS
SSADTLADELKTSPIDSTESGSSVGDAVESVDGEALSSDLKRLLTFADET
RATREQLCEDLDDVPSVNVTDANAQQIAGLVRAATEELQLATDRMDEIRD
ARREQQKIADVQQSPDEEEELGVSSAADSAVATQSACRPPSAVAHRTEVD
ITSSSSTVTDEEKALGEKEKEQASKQLSVSEAQDEDVDPTNPLRACVEDA
LQKHKAILESSKKLTLEANEFVAKSEAALKLMEPIDSDESVKGDDLPCVT
NNLKPTWFVEASHGAAIIATQLEKNHASQPSTPRNAEEKVSSEKDVQQAA
QLLEKSVASRSKSSTETIRSRRRKDGSRSLDCINLTTQSTAKSMDLASDS
SSAMLCTPSSLASSTKTARSVRFAELPPSYSATRSVDDAGVVSSGKPGKM
RCAAEIHPSSEPTYASTSTPSTATASSSQSVSALASEDMSKVANDCDKSA
PRAGMVPAVENFVNVAKRDVSERPTRARTFTEKSELQARKDAASGRSRRR
DPHMTKNDRSRPITQVTSSRPPRLQRTQTPRRVMRRKDAIERSAVPQQPA
AKPRPPRRTPPRSASVDDLNKLNKCSRPKNKVVLVESDVTSGGRDTSFTT
MDVASIPKDSTEGQAQSTSSTSVKNRTNSSKCSDDEICNEGKDGAESLPS
SVEECMEDQPMPNALENVQKKLFMTPESAGSSSTALDTPGDELDAVERMY
GLRKATGAVKNTLTPDKNTAKNAKFDFLQNMTPLPGKGSMNQSGSLSDED
VLFSPATRIPQPQIPNRPKATSSDGFFAGEAAQWQQSVRSQNGTENSTLT
RTTSESTSRRSRFTGILSSSSNGSGGKKSRVQLLRARLAALNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028163HAUS_6_N
IPR026797HAUS_6