Gcaud9843.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9843.t1
Unique NameGcaud9843.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length633
Homology
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A2V3IZR5_9FLOR (Splicing factor 3A subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZR5_9FLOR)

HSP 1 Score: 829 bits (2142), Expect = 3.000e-296
Identity = 431/638 (67.55%), Postives = 531/638 (83.23%), Query Frame = 0
Query:    6 EEKSLDGVGVIIPPPDVRSILETTAEFVAKRTAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQK-EPLHEHKSKPSQP--LNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDVNLPAPVADTRQLPKILAAAREAEKERLKNQRDVDMDIDNVAVTAKNVRVETANVLSDIPADRILRNELVNRRANQDNVNEATVVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARVKKAQPSGPKLPATSTSD--EARPSKRARVEAAVDALSRGKKLTENEEVEKNKGKQD------QTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNKDWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKKH 632
            + K+L+GVGVIIPPPD+RSIL+TTA FVAK+ AFE  +LQKNG++PRFAFLH+ NPYHAYYR+RI H+R +K+ A +  +K +     K+K ++P  ++E  +    A  ++AS+ATT  TAVVSFLKAERAKQ+A RPEPREPP DDLFTLVSV+P P  L+LDVMKLTAQ+VA + +QFL+ LS+KE RNS+FDFLKPMHPHN+VFQRL+DAYKAIL +GEQK+Q+L+SL+KQ+ES + +++EVWY H+WECQKAEREYEAAL+E+EKMK AQIDWYDFVV+ET++FG DDV+LPAP+ADTRQLPKILAAAR+AE+ER+KNQR+VDM+ID V  TA  VRV+TANV +DIPA RI R+E   RR ++ +V EATVVLPSG RVP+SKVQES+R EL+NPSYKSE+ARAA+KNR++NLADGDEVARNLAR GQ Q  G VYNRGDLQ+ALAVMPK  ++EADA V+KA+  GPKLP    ++  + R +K+ARVEAAVD LSR K+  E  E++   G           GGS L+SAEEWL KQG+NAQVR+KLP+H NK+W+L+G+EIEMSAPLK++VGKLK+A+AK TKLPANKQKLSM GVGFLKD  +LA+YNVGDGAVISVEVKERGGRKKH
Sbjct:    8 QSKALEGVGVIIPPPDLRSILDTTASFVAKKPAFESRILQKNGDDPRFAFLHSSNPYHAYYRERIQHHREVKEAAGAQSEKKDDSRPEKAKSTEPDSVDERSEEQQHAARSEASRATTVKTAVVSFLKAERAKQQAERPEPREPPADDLFTLVSVNPPPHPLALDVMKLTAQFVAQNGTQFLSVLSQKESRNSIFDFLKPMHPHNIVFQRLLDAYKAILDTGEQKQQLLKSLRKQAESKENVLKEVWYKHDWECQKAEREYEAALNENEKMKGAQIDWYDFVVVETVDFGEDDVDLPAPIADTRQLPKILAAARKAEQERIKNQREVDMEIDTVGETANKVRVDTANVDNDIPASRIRRDEPKQRRESEASVKEATVVLPSGARVPMSKVQESIRTELMNPSYKSERARAADKNRIQNLADGDEVARNLARWGQVQRKGVVYNRGDLQKALAVMPKGKVTEADASVRKAERLGPKLPGRGVAEGEDNRATKKARVEAAVDVLSRAKQQVEATEIDAEVGSGQGAAVGAAAGGSGLMSAEEWLKKQGSNAQVRIKLPMHGNKEWELEGQEIEMSAPLKRSVGKLKNAIAKFTKLPANKQKLSMVGVGFLKDSTSLAAYNVGDGAVISVEVKERGGRKKH 645          
BLAST of Gcaud9843.t1 vs. uniprot
Match: R7QGI3_CHOCR (Splicing factor 3A subunit 1, SF3-A n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGI3_CHOCR)

HSP 1 Score: 557 bits (1436), Expect = 7.840e-189
Identity = 329/668 (49.25%), Postives = 425/668 (63.62%), Query Frame = 0
Query:   11 DGVGVIIPPPDVRSILETTAEFVAKRTAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKP----SQPLNETLKAH---------DDATENDA----------SKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDVNLPAPVADTRQLPKILAAAREAEKERLKNQRDVDM-----DIDNVAV----TAKNVRVETANVLSDIPADRILRNE--LVNRRANQDNV----NEATVVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARVKKAQPSGPKLPATSTSDEARPSKRARVEAAVDALSRGKKLTENEEVE--------KNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNKDWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKKH 632
            + VG+I+PPP+V+ ILETTA +V K+ A E  VLQK+ ++PRF+FL   +PY+AYY  ++   R+      + +Q       K K      QPL+   + H           AT +D            K TT+ TA VSFLK+ RAK+ AAR EPREPPP+DLFTL+S++P P AL L+VMKL AQ+VA +  +FLTAL  KE RNSLFDFL+PMHPH +VFQRLVDAY+AI+  G      L       E    IM++VWY+H+WEC +AERE++AA+DESEK+K AQIDWYDFVVLET++   D+ NLPAPVAD +QLPKILAA R+ E                 +  N +V    T K+  V T    + +  DRI +    +  ++ N   V    +E TVVLPSG RVPLS+ + SMR EL+NPSYK E+ARAA KNR +NLA G+E+AR+LAR  Q +  G VYNRGDLQEALA  PK+  +EAD R+KKA+  GPKLP     + + P+KR RVEAA +AL +                   +  G   +     L++A+EWL KQG +AQVR+K+P HSNK+WKLQG+E+E+ APLKK V  LK  + K TKLPA KQKL M G GFLKD MTLA YNV +   I++EVKERGGRK++
Sbjct:    9 ERVGIIVPPPEVKGILETTATYVGKKPALEARVLQKHNQDPRFSFLKVSDPYYAYYCSKVAEARAAATGQPAPVQSISSEAEKGKEIITEGQPLSSKDQIHAKDGQVPSASQATADDEPVRGSKDAADEKMTTSATAKVSFLKSIRAKEEAARQEPREPPPEDLFTLISMAPQPHALGLEVMKLAAQFVAKNGREFLTALRSKESRNSLFDFLRPMHPHFIVFQRLVDAYRAIMTEGNASN-FLPKGHNVRECEKAIMQDVWYMHDWECLRAEREHDAAMDESEKVKAAQIDWYDFVVLETVDIDDDETNLPAPVADAKQLPKILAATRKLELXXXXXXXXXXXXXXTDETPNGSVLSQTTEKHGMVVTVEADTALSWDRIRKEPTAIPVKQVNDVRVGSIADEPTVVLPSGQRVPLSQAEASMRAELLNPSYKDERARAAAKNRKQNLARGEEMARHLARWEQQRTEGGVYNRGDLQEALATQPKSSAAEADVRLKKAERLGPKLPGMEIEELSPPAKRRRVEAAKEALEKAXXXXXXXXXXXXXXXXXAEAAGIATEEKLPGLMTADEWLQKQGQHAQVRIKMPSHSNKEWKLQGQEMELKAPLKKMVSNLKKVIEKWTKLPAKKQKLHMEGAGFLKDKMTLAFYNVSNETTITLEVKERGGRKRN 675          
BLAST of Gcaud9843.t1 vs. uniprot
Match: M2WV09_GALSU (Splicing factor 3A subunit 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WV09_GALSU)

HSP 1 Score: 309 bits (791), Expect = 1.880e-93
Identity = 215/623 (34.51%), Postives = 330/623 (52.97%), Query Frame = 0
Query:   19 PPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLK-----AHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTL-VSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDVNLPAPVADTRQLPKILAAAREAEKERLKN-QRDVDMDIDNVAVTAKNVRVETANVLSDIPADRILRNELVNRRANQDNVNEAT--VVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARVKKAQPSGPKLPATSTSDEARPSKRARVEAAVDALSRGKKLTENEEVEKNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNKDWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKK 631
            PPDV  I+E TA +VAK  ++FE  VL+ N   P+F FL   +P+H+YY + +   R                     P+ P + T+      A  ++  N   ++       VS  K    K +AARP P +PPP+D+FT  V   P P+ + +D+MKLTAQ++A +   FL  L  KE RN  F+FLKP HP+   FQRLVDAY  ++   +Q   +LE +K+ + S   +ME+++Y  +W+  + E++ E      E++++  IDW+DFV++ETI+    +VNLPAP+A+        +  R  E    K  +  ++ D                   +DIPAD+I R +   R ++  N N  +  V LPSG RVP+ +  ES+++EL++P YK E+ RAAEKN+ +NLA   EVA NL RL   +    +YNR DLQ  +A           A  +K++ S  ++ A   + + +PS  + +  A  +  +G+ +        N  + D    +S    EE +       QV V++  HSN++W L+G+ I +  P + T+  LKS LA + KL  NKQK+S    G+LKD ++LA Y   DG V+ +EVKERGG+KK
Sbjct:   23 PPDVEKIIEKTAVYVAKNGSSFEARVLEMNRNNPKFYFLLESDPFHSYYLQVLQEKRRY---------------FAGPPTTPTSSTIGMDHSLAPGESQPNLRGESIAEAAPAVSKAKLSERKAQAARPIPTQPPPEDVFTAQVPEEPLPTPMDVDIMKLTAQFIARNGRSFLQELHSKEYRNPQFEFLKPTHPYFTFFQRLVDAYSIVIAPDDQ---MLEKIKESAHSLGKVMEDLYYRIDWDMLQEEKKTEQNRSAVERVQMQMIDWHDFVIVETIDLDEREVNLPAPMANGN----FSSWNRRTEMMNGKQTESSMEQDDXXXXXXXXXXXXXXXTTYTDIPADKI-RKDYRPRTSSSSNENRDSIEVTLPSGQRVPVDRANESIKMELLDPKYKEERQRAAEKNKYQNLASDAEVAMNLGRLSDQKLD--IYNRADLQNVMA-------ERRIAEDRKSEESMEQVKAPEPTVQLKPS--SLLWEASSSWDKGENM--------NPARMDNQEDNS----EEGI-------QVHVRVQSHSNQEWNLRGQTISLQVPYQATLLDLKSTLAPLVKLAPNKQKISADNFGYLKDNLSLADYQFYDGIVMYLEVKERGGKKK 592          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A5J4YYE9_PORPP (Putative splicing factor 3A subunit 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYE9_PORPP)

HSP 1 Score: 244 bits (622), Expect = 4.550e-68
Identity = 202/654 (30.89%), Postives = 311/654 (47.55%), Query Frame = 0
Query:    6 EEKSLDGVGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTA---GTAVVSFL--KAERAKQRAA-----RPEPR---EPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQ-ILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDVNLPAPVADTRQLPKILAAAREAEKERLKNQR-----DVDMDIDN--VAVTAKNVRVETANVLSDIPADRILRNELVNRRANQDNVNEATVVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQGTGAVY---NRGDLQEALAV--MPKAPLSEADARVKKAQPSGPKLPATSTSDEA-------RPSKRARVEAAVDALSRGKKLTENEEVEKNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNKDWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKE 625
            EE   DG   I+PPP++R+I+E T  FV K    FE  V   N    +F FL   +PYHA+Y+ R+    + ++DA      EP       P    +E L+A     + DA    T    G  V   +  +A+ +K R A     +  PR   +PPP D+F++   S  P+AL L+V+KLTAQ+   + + FL  + +KE RN+LF FL+P+HPH+ +F +L +AY+ I    +   Q IL  L       D + +++ +  +   ++ + E   A   +E      IDW+DF  +ETI+F  D+ +LP P+  ++ + + L     AE   +  Q      D DMD+D+   A   +NV  +T   +S                          V LP+G  VPL  +  +MR  L++P YK E+  AA++ R+ NL  GDE A NL R  +A+    V    N  +    L+   +   P + +DA         P LP     D+        R  K  RV+     L      T++  +    G       S  +   EW+A+ G   ++ V+ P H N +WKL G+ I +  PL  +VG LK  L ++TK+P+NKQKL     GFLKD  +LA YNV    V+++ +K+
Sbjct:   12 EEDGKDG-SPILPPPEIRTIIEKTVPFVRKNGLEFEAKVRAANASNVKFGFLDKSHPYHAFYQSRL---HASEEDAEGRTTIEP-------PGHDADEALRARAPP-DQDALVPPTGMMMGGTVTGMVEKRAQISKSRQALLEQSKTRPRTALDPPPVDVFSIPECSLVPTALELEVVKLTAQFTVCNPAAFLDVIRKKEQRNALFAFLQPLHPHHELFSKLCEAYRIIQTKDQTLVQRILRLLDSPEPVLDLMNQKMEWERHLHMERDDEEPSGASSGAEAG--CTIDWHDFTTVETIDFEEDE-HLPLPIL-SQDIARELQIRETAEAATVAQQNSEKPVDEDMDVDHHQTARGQENVAQDTGVAVSG-----------------------QLVRLPTGQVVPLEDIARTMRAHLLDPKYKEERRIAADRRRIVNLVSGDEAAENLNRFSEARPRAIVQKNVNTANTPRRLSTNNVDPTPRTRSDA---------PLLPKRGVEDDRKEKLDDERRKKVPRVQHTSSPLG-----TDSAALNPKSGND----ASRFVPEREWIARHGTLIKISVQAPTHENNEWKLTGQRISLELPLAVSVGDLKKTLTQLTKVPSNKQKLYAEPGGFLKDNQSLAYYNVVPDCVMTLSLKD 608          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A7S1ER92_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER92_9RHOD)

HSP 1 Score: 237 bits (605), Expect = 1.300e-65
Identity = 218/692 (31.50%), Postives = 337/692 (48.70%), Query Frame = 0
Query:    1 MVLQEEEKSLDG-VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPR---EPPPDDLFTL-VSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQI--LESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALDESEKMKVA---QIDWYDFVVLETIEF-GPDD---VNLPAPVAD---TRQLPKILAAAREAEKERLKNQRDVDMDIDNV-------AVTAKNVRVETANVLSDIPADRILRNELVNRRANQDNVNEA---------TVVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQA-------QGTGAVYNRGDLQEALAVMPKAPLSEADARV-------KKAQPSGPKLPATSTSDEARPSKRARVEAAVDA---------LSRGKKLTENEEVEKNKGKQDQTGGSSLIS---AEEWLAKQGNNAQVRVKLPVHSNK-DWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKK 631
            +V Q++E   DG +G+IIPP +++SI+E TA+FV K   AFE  + + N   P+FAFL   +PYH +Y+       SL +   S++   P + H +  S  +    KA        +        A++S  +    KQ     +     +    D F+L  S+S  PS L L+V+KL AQ VA +    L  +  +E RN+LF FL+  H H+ +F  L  AY+ IL     +K +  +  L+K        +E +  +   E ++ +   E+  D +   K     QIDW DFV++ET++F G  D   + LPAPVA      +L +  A   +A + ++K   ++DMD+D         ++T++ V V        +    I R+++V   A+   +             V LPSG  VP+ +   S+ +EL++P YK +KA+AAE+ R  NLA   EVA NL+RL ++       Q TGAV  R          P AP +  +A          +AQ +     A         +++ R + ++D          L +  K  ENE         D    S+ I     E+W+AK G++ +V+V +  H N  +W+L+G+ I +  PLK +V  LKS L K+TKLP NK KL     GFLKDG +LA YNV   + I++ VKERGGR+K
Sbjct:   25 IVNQDDE---DGSIGIIIPPLELKSIIEKTAQFVIKNGPAFESKIQETNATNPKFAFLKNTHPYHKFYK-------SLLQVPLSSLNSSPSNLHANSESDKVEGNSKADSSIIHQQS--------AIISNPRLSALKQDQISADDSLDSQSSFTDFFSLHTSISHPPSVLELEVIKLCAQSVACAGDSLLKIIRAREERNALFGFLRESHVHHELFTSLRLAYEFILNESSSRKLLGRVRGLEKNRN-----LELMRILSRVESERIQAVNESTSDNTTDPKRNANDQIDWQDFVLVETLDFEGIADHELLLLPAPVASEDFVAELRRRRAIEEDAARTQMKRDVNLDMDVDGSDTEDQQQSMTSEAVGVGNRKKNGPVADISIPRHQIVPALASLHPLYSGGGGGAGKPMMVKLPSGHLVPMDQAGASVHMELLDPQYKEQKAKAAERQRAINLASDAEVAENLSRLTESRKDTTFRQITGAVTERRP--------PNAPNASNEALTMFISHGSSQAQSARALATAXXXXXTVELAQKKREQLSIDDDFAEDDENHLRKKTKTIENE---------DTAATSNEIRFEPEEQWIAKYGDSVKVKVNVCEHQNSFNWELKGQTISLEVPLKVSVAALKSTLTKLTKLPVNKMKLQTESAGFLKDGNSLAFYNVEPNSSINLSVKERGGRRK 676          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A6H5H2Z6_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H2Z6_9HEMI)

HSP 1 Score: 209 bits (533), Expect = 7.610e-55
Identity = 174/632 (27.53%), Postives = 299/632 (47.31%), Query Frame = 0
Query:   13 VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARP-EPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNW-ECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDV-NLPAPVADTRQLPKILAAAREAEKERLKNQRDVDMDIDNVAVTAKNVRVETANVLSDIPA----DRILRNELVNRR--ANQDNVNEATVVLP-SGTRVPLSKVQESMRVELINPSYKSEKARAAEK--NRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARVKKAQPSGPKLPATSTSDEARPSKRARVEAAVDALSRGKKLTENEEVEKNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNK-DWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRK 630
            VG+I PPP+VR+I++ TA FVA+    FE  + Q     P+F FL+  +PYHAYY+ ++  ++  K    +A    P              T++    AT+                LK +   ++ A P  P++PPPD  F  ++  P+ SAL LD++KLTAQ+ A +  QFLT L  +E RN  FDFL+P H     F +L++ Y  +L      K ++  LK++  S   ++E+V Y  +W   Q+ ++  E    E E++  AQIDW+DFVV+ET+++ P ++ N P P        ++L   ++ E                     K +           P     D+++  +  N +  A      E  ++ P +  ++P SKVQE MR+ L++P +  ++ +  +   N+    A G  +  +L +L + +    ++  GD + A+       + E D +                       K  +V   +  ++   ++ E+E V K    ++     +LI   ++LA     A  +V +P+ ++K +WKL G+ +  + PL ++V  LK  + +   +P  KQKL   G+ F KD  +LA YNVG   ++ +++KERGGRK
Sbjct:   24 VGIIYPPPEVRNIVDKTASFVARNGPEFESRIRQNELGNPKFNFLNGGDPYHAYYQHKVKDFKEGKGVEPAAPAAAP--------------TVQKVSTATQ----------------LKQQEILKQVAEPFVPKDPPPD--FEFMADPPSISALDLDIVKLTAQFAARNGRQFLTNLLNREQRNYQFDFLRPQHSLFQYFTKLLEQYTKVL---IPPKDMMAKLKEECNSAAGVLEQVRYRADWLRYQEVQKRKEEQAIEKERVAYAQIDWHDFVVVETVDYQPGEIGNFPPPTTPDEVGARVLMQVQDMEXXXXXXXXXXXXXXXXXXXQHKTINPGDPKKAMQPPLPPAPDKVIVKKDYNPKQTAKITKAGENYLISPLTSEKIPASKVQEHMRIGLLDPRWVEQRDKHIQDKMNQDTVYAGGSAIEASLKQLAERRTD--IFGIGDEETAIGKK----IGEEDKK-----------------------KDDKVSNILKQVASAGEMNEDEPVAKKMKTEE-----NLIPEAQFLANNRGPAAFKVHVPLMADKPEWKLNGQTLTFTMPLTESVAALKVKIQETVGMPPAKQKLQCDGI-FYKDSNSLAYYNVGAATIVQLQLKERGGRK 585          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A6H5J0J2_9HYME (Uncharacterized protein n=2 Tax=Trichogramma TaxID=7490 RepID=A0A6H5J0J2_9HYME)

HSP 1 Score: 205 bits (521), Expect = 6.330e-54
Identity = 188/675 (27.85%), Postives = 318/675 (47.11%), Query Frame = 0
Query:   13 VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARP-EPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNW-ECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDV-NLPAPVADTRQLPKILAAAREAEKERLKNQRDVDMDIDNVAVTAKNV--RVETANVLSDI----------------------------------PADRILRN-----ELVNRRANQDNVNEATVVLPSGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNL-ADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARVKKAQPSGPKLPATSTSDEARPSKRARVEAAVDALSRGKKLT---------ENEEVEKNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLPVHSNK-DWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKK 631
            VG+I PPP+VR+I++ TA FVA+    FE  + Q     P+F FL+  +PYH+YY+ ++       KD      +EP                           S   T G    +  K +   ++  +P  P+EPPP+  F  ++  P+ SAL LD +KLTAQ+VA +  QFLT L  +E RN  FDFL+P H     F +L++ Y  +L      K ++  LK QS + + I++ + Y  +W + Q A++  E       ++  AQIDW+DFVV+ET+++   +V N P P        ++L   R  + E ++ Q + D D + +     N   R +  N + D+                                  P + +++      +  ++ +     +E  V   +G R+P SKVQE MR+ L++P +  ++ +  +K     + A G  +  +L +L + +    ++  GD + A+       + E D   KK          TS+ + A  + RA +    D + +  K+T         ++E + K    +D     SLI  +++L +     Q+ +  P+ ++K DW L G+ + ++ P+ +TV  LK  ++++TK+P  KQKL   G+ F KD  +LA YN+  G VI++  KERGGRKK
Sbjct:   40 VGIIYPPPEVRNIVDKTASFVARNGPEFESRIRQNELGNPKFNFLNVGDPYHSYYQHKV-------KDFKEGKGQEP---------------------------SATVTKGVTPAAQQKQQEILKQVEQPFVPKEPPPE--FEFIADPPSISALDLDTVKLTAQFVARNGRQFLTNLMNREQRNFQFDFLRPQHSLFQYFTKLLEQYTKVL---IPPKDLIPKLKDQSYNFEKILDGIAYRADWIKYQDAQKRKEXXXXXXXRVAYAQIDWHDFVVVETVDYQQFEVGNFPPPTTPDEVGARVLMQERIEDGEDVEMQMESDDDTEILPRIMDNDKDRSKDNNQVQDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPTPGNVVVKKGYDPKQHASKASRPAPPDEYLVSPITGERIPASKVQEHMRIGLLDPRWVEQRDKHLDKLAQETVFAPGTAIEASLKQLAERRTD--IFGVGDEETAIGKK----IGEED---KKKDDKVTWDGHTSSVEAATRAARANI-TLEDQIHQIHKMTLGKHPSDSLDDEPMAKKLRTED-----SLIPEQQFLMRNNGPVQLNILTPLMTDKSDWNLGGQTLVIALPVTETVATLKLRISELTKMPTGKQKLQYEGM-FFKDSNSLAYYNLMSGNVINLLPKERGGRKK 659          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A3S4PN43_9MAGN (Putative splicing factor 3A subunit 1 n=2 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PN43_9MAGN)

HSP 1 Score: 192 bits (489), Expect = 8.780e-49
Identity = 145/446 (32.51%), Postives = 229/446 (51.35%), Query Frame = 0
Query:   13 VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATEN-DASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALD-ESEKMKVAQIDWYDFVVLETIEFGPD-DVNLPAPVADTRQLPKILAAAREAEKERLKNQRDVDMDIDN--VAVTAKNVRV------------ETANVLSDIPADRILRN-ELVNRRANQDNVNEATVVLP-SGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQ 438
            +G+I PPPD+RSI++ TA+FVAK    FEK +L  N    +F FL + +PYHAYY+ RI  +R+        +Q  P  + +S+P+    E   A   A +  +A+K  T     VS  K  +        +  EPP  + +T V +    +   LD++KLTAQ+VA +   FLT L+ +E  N  F FLKP H   + F  L DAY  +L      K ++E L+K    T T++E   +   WE  + +   +A  + E E+M++A IDW+DFVV+E IEF  D D  LP P+     + +   +A E +   ++  ++V+M++D   V +  + +R             ET       P  RI++N +    R   +  +   VV P +G  +P++++ E MR+ LI+P YK +K R   K R   LA  DE++RN+  L + +
Sbjct:   55 IGIIHPPPDIRSIVDKTAQFVAKNGPEFEKRILANNTGNAKFNFLSSSDPYHAYYQHRISEFRAQ-------LQSTPQQDTQSEPADSSGEAAPASVPAADGIEAAKPDT-----VSLFKPVQ--------KVLEPPEAEQYT-VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTTLADAYSKVL---MPPKGLMEKLRKSVADTTTVLERCLHRLEWERSQEQARQKAEDEIEQERMQMAMIDWHDFVVVEMIEFADDEDEELPQPMTLEEVIKRSKVSAMEEDDVIIEPGKEVEMEMDEEEVQLVEEGMRAASLEENEGEKKNETKAPDEPEPPMRIVKNWKRPEERIPAERDSTKFVVSPITGELIPINEMAEHMRISLIDPKYKEQKERMMAKIRETTLAQDDEISRNIVGLARTR 476          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A6J2YKF1_SITOR (splicing factor 3A subunit 1 n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YKF1_SITOR)

HSP 1 Score: 192 bits (487), Expect = 8.880e-49
Identity = 203/770 (26.36%), Postives = 333/770 (43.25%), Query Frame = 0
Query:   13 VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWE-CQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDV-NLPAPVADTRQLPKILAAAR-----------EAEKE------------------RLKNQRD----VDMDIDNVAVTAKNVRVETANVLSDIPA--DRILRNELVNRRA---NQDNVNEATVVLP-SGTRVPLSKVQESMRVELINPSYKSEKARAA--EKNRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQEALAVMPKAPLSEADARV-KKAQPSGPKLPATSTSDEARPSKRARV--EAAVDALSRGKKLTENEEVEKNKGKQDQTGGS-------------------------------------------------------------------------------------------------------SLISAEEWLAKQGNNAQVRVKLPVHSNK-DWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVGFLKDGMTLASYNVGDGAVISVEVKERGGRKK 631
            VG+I PPP+VR+I++ TA FVA+    FE  + Q     P+F FL+  +PYHAYY+ +++ ++  K                              +    +  SK T + +A     + E  KQ      P++PP +  F  ++  P+ SAL LD++KLTAQ+VA +   FLT L  +E RN  FDFL+P H     F +L++ Y  +L      K + + LK++  ST T++E+V Y   W+  Q+A++  E  + E E++  AQIDW+DFVV+ET+++ P ++ N P P        +IL   R           E+++E                    K+ RD     DMD ++        R +  ++   +P   D++L  +   ++A    +  V +  +V P +G ++P SKVQE MR+ L++P +  ++ +    + N+    A G  +  +L  L + +    ++  GD + A+       + E D R  +K    G     TS+ + A  + RA +  E  +  + + K L  +EE EK  G ++ TGGS                                                                                                       SL+  E +LA+  +   V+V +P+   K +WKL G+ +  + PL ++V  LK+ + +   +P  KQKL   G+ F KD  TLA YN+   AVI ++VKERGGRKK
Sbjct:   21 VGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNTGDPYHAYYQHKVNEFKEGK----------------------------GQEPTISHGVSKLTVSASA--QQKQHEILKQVEQPFVPKDPPSE--FEFIADPPSISALDLDIVKLTAQFVARNGRAFLTQLMNREQRNFQFDFLRPQHSLFQYFTKLLEQYTKVL---IPPKTMQQKLKEEVRSTKTVLEQVKYRAEWQKYQEAQKAKEEEILERERIAYAQIDWHDFVVVETVDYQPFEIGNFPPPTTPEEVGARILIQERLEDGDDIEMQLESDEEDGGQEDQSLSYMEDRTNTNRKDARDNNQVQDMDEESSXXXXXXXRSDQPSIQPPLPPVPDKVLVKKYDPKQAPKVTRPTVGDDYLVSPITGEKIPASKVQEHMRIGLLDPRWVEQRDKHVTDKMNQDTVYAQGTAIEASLKLLAERRTD--IFGVGDEETAIGKK----IGEEDIRKDEKVTWDGH----TSSVEAATRAARANITLEEQIHQIHKVKGLLPDEEKEKI-GPKNVTGGSKMKGTGQMIKPPPPPQLQAPKATIVTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGFVTPLPPPPMGPPVTMPMKHPSEVQLDDEPSNKKMRNEDSLVPEEVFLARNPSPVMVKVTIPMMPEKSEWKLSGQVLNFTLPLGESVANLKAKIQEEISMPPAKQKLFFDGM-FFKDSNTLAYYNITPAAVIQLQVKERGGRKK 743          
BLAST of Gcaud9843.t1 vs. uniprot
Match: A0A1S3ZPU0_TOBAC (probable splicing factor 3A subunit 1 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3ZPU0_TOBAC)

HSP 1 Score: 185 bits (470), Expect = 4.800e-48
Identity = 139/449 (30.96%), Postives = 227/449 (50.56%), Query Frame = 0
Query:   13 VGVIIPPPDVRSILETTAEFVAKR-TAFEKMVLQKNGEEPRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPLNETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDDLFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFLKPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWYIHNWECQKAEREYEAALD-ESEKMKVAQIDWYDFVVLETIEFGPD----DVNLPAPVADTRQLPKILAAAREAEKERLKNQRDVDMDIDN--VAVTAKNVRVETANVLSDI-------------PADRILRN-ELVNRRANQDNVNEATVVLP-SGTRVPLSKVQESMRVELINPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQ 438
            +G+I PPPD+RSI++ TA+FVAK    FEK ++  N    +F FL+A +PYHAYY+ R+   RS  + +              +P+QP ++  +A       D ++AT      V F    R           EPP  + +T V +    +   LD++KLTAQ+VA +   FLT L+ +E  N  F FLKP H   + F  L DAY  +L      K + + L+K +    T++E   +   WE  + +   +A  + E E++++A IDW+DFVV+ETI+F  D    D++LP P+     + +      E E+E ++  ++V+M++D   V +  + +R  T     D+             P  RI++N +    R   +      VV P +G  +P++++ E MR+ LI+P YK +K R   K +   LA  DE++RN+  L + +
Sbjct:   60 IGIIYPPPDIRSIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEARSQNQASGE------------QPTQPADQ--EAAPAPPTADGAEATARPDPSVQFRPVRRVL---------EPPEAEQYT-VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVL---MPPKGLTDKLRKSAADMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMIDWHDFVVVETIDFADDEDQXDLDLPPPMTLEEVIRRSKMPTLE-EEEYVEPGKEVEMEMDEEEVQLVEEGMRAATLQENGDVKSVETMAIPEEQDPPMRIVKNWKRPEERIPAERDPTKYVVSPITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTR 480          
The following BLAST results are available for this feature:
BLAST of Gcaud9843.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZR5_9FLOR3.000e-29667.55Splicing factor 3A subunit 1 n=1 Tax=Gracilariopsi... [more]
R7QGI3_CHOCR7.840e-18949.25Splicing factor 3A subunit 1, SF3-A n=1 Tax=Chondr... [more]
M2WV09_GALSU1.880e-9334.51Splicing factor 3A subunit 1 n=1 Tax=Galdieria sul... [more]
A0A5J4YYE9_PORPP4.550e-6830.89Putative splicing factor 3A subunit 1 n=1 Tax=Porp... [more]
A0A7S1ER92_9RHOD1.300e-6531.50Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6H5H2Z6_9HEMI7.610e-5527.53Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A6H5J0J2_9HYME6.330e-5427.85Uncharacterized protein n=2 Tax=Trichogramma TaxID... [more]
A0A3S4PN43_9MAGN8.780e-4932.51Putative splicing factor 3A subunit 1 n=2 Tax=Cinn... [more]
A0A6J2YKF1_SITOR8.880e-4926.36splicing factor 3A subunit 1 n=2 Tax=Sitophilus or... [more]
A0A1S3ZPU0_TOBAC4.800e-4830.96probable splicing factor 3A subunit 1 n=1 Tax=Nico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..276
NoneNo IPR availableGENE3D3.10.20.90coord: 518..631
e-value: 1.8E-21
score: 78.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..152
NoneNo IPR availablePANTHERPTHR15316:SF1SPLICING FACTOR 3A SUBUNIT 1coord: 11..629
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 547..624
e-value: 5.6E-8
score: 42.5
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 559..625
e-value: 2.6E-10
score: 39.9
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 547..628
score: 15.231102
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 166..219
e-value: 3.6E-9
score: 46.5
coord: 23..75
e-value: 7.2E-15
score: 65.4
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 23..73
e-value: 1.4E-12
score: 47.4
coord: 166..217
e-value: 1.7E-13
score: 50.3
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 168..210
score: 12.125406
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 25..66
score: 11.789576
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 11..80
e-value: 9.8E-17
score: 62.3
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 162..218
e-value: 3.9E-17
score: 63.9
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 140..218
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 9..74
IPR022030Splicing factor 3A subunit 1, conserved domainPFAMPF12230PRP21_like_Pcoord: 239..434
e-value: 1.2E-23
score: 84.1
IPR045146Splicing factor 3A subunit 1PANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 11..629
IPR035563Splicing factor 3A subunit 1, ubiquitin domainCDDcd01800Ubl_SF3a120coord: 543..624
e-value: 2.71968E-25
score: 97.6439
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 529..629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_794_length_17858_cov_4.718298contigNODE_794_length_17858_cov_4.718298:10862..12760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9843.t1Gcaud9843.t1Gracilaria caudata M_176_S67 malemRNANODE_794_length_17858_cov_4.718298 10862..12760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9843.t1 ID=Gcaud9843.t1|Name=Gcaud9843.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=633bp
MVLQEEEKSLDGVGVIIPPPDVRSILETTAEFVAKRTAFEKMVLQKNGEE
PRFAFLHAFNPYHAYYRKRIDHYRSLKKDASSAMQKEPLHEHKSKPSQPL
NETLKAHDDATENDASKATTAGTAVVSFLKAERAKQRAARPEPREPPPDD
LFTLVSVSPAPSALSLDVMKLTAQYVANSDSQFLTALSRKEGRNSLFDFL
KPMHPHNLVFQRLVDAYKAILGSGEQKKQILESLKKQSESTDTIMEEVWY
IHNWECQKAEREYEAALDESEKMKVAQIDWYDFVVLETIEFGPDDVNLPA
PVADTRQLPKILAAAREAEKERLKNQRDVDMDIDNVAVTAKNVRVETANV
LSDIPADRILRNELVNRRANQDNVNEATVVLPSGTRVPLSKVQESMRVEL
INPSYKSEKARAAEKNRLRNLADGDEVARNLARLGQAQGTGAVYNRGDLQ
EALAVMPKAPLSEADARVKKAQPSGPKLPATSTSDEARPSKRARVEAAVD
ALSRGKKLTENEEVEKNKGKQDQTGGSSLISAEEWLAKQGNNAQVRVKLP
VHSNKDWKLQGEEIEMSAPLKKTVGKLKSALAKMTKLPANKQKLSMAGVG
FLKDGMTLASYNVGDGAVISVEVKERGGRKKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR000061Surp
IPR035967SWAP/Surp_sf
IPR022030SF3A1_dom
IPR045146SF3A1
IPR035563SF3As1_ubi
IPR029071Ubiquitin-like_domsf