Gcaud9827.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9827.t1
Unique NameGcaud9827.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length209
Homology
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A2V3IX82_9FLOR (AMMECR1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX82_9FLOR)

HSP 1 Score: 352 bits (903), Expect = 8.700e-122
Identity = 168/205 (81.95%), Postives = 184/205 (89.76%), Query Frame = 0
Query:    1 MAPSMVDEAPSRTEATVQMCARAFETIATQLRPDLPSPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKMIED 205
            MAPS++D+  SRT+ATVQMCA+AFETI   LRP LPSPPD DLP+ +GGVFVTWSV RGRDSHYSLRGCIGTLTPAP+H AVPRYAAQAAFHDSRFDPIS+SE++KLKVGVSVLSQFE A+HVYDW  GVHGIVL L GGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRG VD+SVL SAT+TRYQSSK EL F  Y+K+IED
Sbjct:    1 MAPSLIDDVVSRTDATVQMCAKAFETITATLRPGLPSPPDIDLPNSKGGVFVTWSVLRGRDSHYSLRGCIGTLTPAPVHIAVPRYAAQAAFHDSRFDPISASEVSKLKVGVSVLSQFEAAEHVYDWVVGVHGIVLSLAGGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGAVDQSVLNSATITRYQSSKIELTFSDYMKLIED 205          
BLAST of Gcaud9827.t1 vs. uniprot
Match: R7Q557_CHOCR (AMMECR1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q557_CHOCR)

HSP 1 Score: 245 bits (625), Expect = 1.130e-79
Identity = 120/188 (63.83%), Postives = 146/188 (77.66%), Query Frame = 0
Query:   19 MCARAFETIATQLRPDLPSPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGG-YSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKMIED 205
            MCA+AF TI   LRP LP+P   D+P+ +GG+FVTWS PRG   +YSLRGCIGTL+ A L  AV RYA+ AAF DSRFDPI++SE+ +LKVGVSVLS FE A HVYDW  G HGI+L L GG YSATYLPEVCAE  W+KE C+RSLAEKAG R  +D++VL +A +TRYQS+K EL F  Y+++IE+
Sbjct:    1 MCAKAFHTICKVLRPRLPAPQSLDIPTSKGGLFVTWSAPRGSRRNYSLRGCIGTLSRANLDDAVERYASYAAFRDSRFDPIAASEIDELKVGVSVLSGFEKASHVYDWDIGTHGIILELAGGRYSATYLPEVCAEQNWSKETCIRSLAEKAGHRRPMDDAVLEAAVLTRYQSTKAELLFAEYMELIEE 188          
BLAST of Gcaud9827.t1 vs. uniprot
Match: M2W5A9_GALSU (AMMECR1 family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5A9_GALSU)

HSP 1 Score: 158 bits (399), Expect = 6.120e-45
Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 0
Query:   17 VQMCARAFETIATQLR----PDLP-SPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVL-YLPGG--YSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYI 200
            + +C  AF+ + ++LR    P  P S PD D    E  +FVTW+          LRGCIGTLTP  L  A+  Y   +AF D RF PI   EL  L V VS+L  F     VYDW  GVHG+++ +L  G  YSATYLPEVC E GWTKE C+ SL  K+G+R  + ES+L +  +TRY S K  L++  Y+
Sbjct:   39 LDLCLFAFDLLISRLRHVSEPTCPASVPDID----EYALFVTWNKTNREGERTQLRGCIGTLTPLNLRRAIHTYTLASAFRDRRFPPICYEELESLSVSVSILHNFLTGSDVYDWQVGVHGVIIDFLDKGSAYSATYLPEVCLEQGWTKEQCISSLIRKSGYRNTISESLLKTIRLTRYSSKKYSLSYSEYL 226          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A1X6NLF3_PORUM (AMMECR1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLF3_PORUM)

HSP 1 Score: 151 bits (382), Expect = 4.520e-42
Identity = 82/201 (40.80%), Postives = 112/201 (55.72%), Query Frame = 0
Query:   11 SRTEATVQMCARAFETIATQLRPDLPSPPDFDLPSREG-GVFVTWS------VPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGG---YSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIK 201
            S T ++  MC  AF+ +   LR + P P   ++P  +  G+FVTW+              Y LRGCIGTLTP+ LH+++  YA  +A  D RF  ++ +E++ L V VSVLS FE A  VYDWT GVHGI++    G   Y ATYLPEV  + GW K   + S   KAG+ G  D+   G   + RYQS+K  L +  Y +
Sbjct:   41 SMTSSSRPMCIFAFDALLASLRSEAPPPMPTNVPDVDDVGLFVTWNKRSTGXXXXXXSDGYRLRGCIGTLTPSSLHSSLATYAVMSAVGDRRFPAVTRAEVSSLSVSVSVLSAFEEAADVYDWTVGVHGIIVSFEAGNRSYRATYLPEVMGDMGWDKGDALASAVRKAGWSGRTDDRFWGRVRLRRYQSTKVSLPYGVYAR 241          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A7S4INH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4INH1_9STRA)

HSP 1 Score: 147 bits (371), Expect = 6.520e-41
Identity = 88/194 (45.36%), Postives = 106/194 (54.64%), Query Frame = 0
Query:   15 ATVQMCARAFETIATQL---------RPDLPSPPDFDL--PSREGGVFVTW--------------SVPRGRDSH-YSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVL---YLPGGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVL 179
            AT +MC   F+ I   L         R DL +PP      PS E  +FVTW              S P     H + LRGCIGTL+P PL TA+  YA  +AF D RFDPIS  E+  L+V VS+L  +E   H +DWT GVHGI++   Y    YSATYLPEV  E GWT+E  V SL  KAGFRG V  ++L
Sbjct:   18 ATAEMCVYCFDLIVDDLVSRTKGRKRRVDLRNPPFAKSLPPSTECPLFVTWDKRRASSRRWSPSRSTPSSSPRHEFDLRGCIGTLSPRPLQTAIGEYALTSAFRDRRFDPISDHEIPHLRVAVSLLVHYEECSHCHDWTVGVHGIIIKFMYEQQPYSATYLPEVPLEQGWTQEEAVESLVRKAGFRGEVCANLL 211          
BLAST of Gcaud9827.t1 vs. uniprot
Match: D7FUU4_ECTSI (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU4_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 7.310e-41
Identity = 85/198 (42.93%), Postives = 113/198 (57.07%), Query Frame = 0
Query:   10 PSRT-EATVQMCARAFETIATQLRPDLPSPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLP----GGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKM 202
            P+ T +AT +MCA  F+ I        P PP F       G+FVTW   +      SLRGCIGTL P  + + +  Y   +A +D RF PI   EL  L V VS+L ++EPAQH  DW  GVHGIV+         YSAT+LPEV AE GW+++  +  L  KAG++ +VD + L    VTRYQSSK +L +  Y++M
Sbjct:   45 PAETLQATREMCAYCFDVIIAHFNNIEPPPPSFST-RYVCGMFVTWD--KHEHGTESLRGCIGTLHPQAI-SQLRDYTYSSALNDRRFAPIEMPELASLDVSVSLLVKYEPAQHWEDWEIGVHGIVIKFDDDRGSSYSATFLPEVAAEQGWSRKVTLSRLVRKAGYKRVVDRAFLAGVEVTRYQSSKHKLPYQEYLEM 238          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A1Y2B7T5_9FUNG (AMMECR1 domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2B7T5_9FUNG)

HSP 1 Score: 146 bits (368), Expect = 9.220e-41
Identity = 86/190 (45.26%), Postives = 108/190 (56.84%), Query Frame = 0
Query:   20 CARAFETIATQL-RPDLPSPPD-FDLPSREGG---VFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKMIE 204
            C   F T+ T L  P  PSP    +L S   G   +FVTW +        +LRGCIGT +P PL T +  YA  AAF D RF PI++SE+ +L+VGVS+L  FEPA    DW  G HGI +    G +ATYLPEV  E GWT    + SL  K GFRG + E V     VTRY+S K E++++ Y   IE
Sbjct:    7 CHLCFTTLLTDLSHPLTPSPSTKSNLISEIQGTFPLFVTWKLSS------NLRGCIGTFSPQPLSTGLQTYARAAAFQDRRFSPITASEVPQLRVGVSLLVDFEPAAGYTDWIIGTHGIWIEFGDGVTATYLPEVAGEQGWTHVEALDSLLRKGGFRGRITEDVRRGVKVTRYRSVKKEVSWEEYRAYIE 190          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A6V1N2W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N2W4_HETAK)

HSP 1 Score: 145 bits (365), Expect = 4.640e-40
Identity = 86/204 (42.16%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    7 DEAPSRTEATVQMCARAFETIATQLRPDLPSPP----DFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGG----YSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKM 202
            +E P   +A+ +MCA  F+ +        PS P    DF+ P      FVTW+    R     LRGCIGTL+P P+   +  Y   +AF D RF+P+  +EL  L+V VS+L ++EPA    DW  GVHGI++         YSATYLPEV  E GW     V SL  KAG+RG VD+++L S  VTRYQSSK +L +  Y  +
Sbjct:   11 NEKPDIPKASQEMCAYCFDVLICAFDGTEPSDPRFPTDFECP-----FFVTWNKTE-RGGQRRLRGCIGTLSPRPV-ADLKDYTHSSAFRDRRFEPVGRAELGALQVAVSLLVRYEPAADWRDWEVGVHGILINFYSSRNEHYSATYLPEVAPEQGWGHLEAVSSLVRKAGYRGRVDDALLDSLEVTRYQSSKAKLDYAEYCNL 207          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A7S1E4N2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E4N2_HEMAN)

HSP 1 Score: 145 bits (367), Expect = 5.800e-40
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 0
Query:    9 APSRTEATVQMCARAFETIATQLRPDLPSPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLP---GGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGY 199
            AP+      + C   F+ + +  R      P F  P+ E  +FVTW     +    SLRGCIG LTP  +H  V +YA+ +AF+D RF P++  E+  L+  V++L  F+ A H  DW  GVHGI++         SATYLP VC+E GW+++ C++SL  KAG+ G V +++L S  +TRY+  K  + FD Y
Sbjct:   40 APTDHHNLEEACRFCFDVLMSHFRRTACPKPGF--PNGEYPLFVTWQK-FDQQGGSSLRGCIGNLTPIDIHDGVKKYASVSAFNDKRFSPVAEREVGVLECSVTLLFNFQEASHYLDWQVGVHGIIIEFELDRQSLSATYLPSVCSEQGWSQDECIKSLVRKAGYNGAVSQNLLKSIRLTRYEGRKATVPFDKY 230          
BLAST of Gcaud9827.t1 vs. uniprot
Match: A0A8H7VTL7_9FUNG (AMMECR1 domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VTL7_9FUNG)

HSP 1 Score: 143 bits (361), Expect = 1.360e-39
Identity = 81/203 (39.90%), Postives = 111/203 (54.68%), Query Frame = 0
Query:   10 PSRTE-ATVQMCARAFETIATQLRPDLPSPPDFDLPSREGGVFVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPISSSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGGY----SATYLPEVCAEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYIKMIEDAK 207
            PS  E ATV+ C   F+ + + L    P  P F   + E  +FVTW +    D+H  LRGCIG      LH  +  YA  +A  D RF+PI+  E+ +L   VS+L  FE  +   DW  GVHGI +     +    +ATYLPEV  E GWTKE  + SL  K G+RG +++ VL S  +TRYQSSK +  +  YI   E+++
Sbjct:    2 PSTIEVATVEHCYYCFDVLISYLEDKKPENPQFT--NDEYPLFVTWKIETHGDTH--LRGCIGNFNAMSLHNGLQEYALTSALQDRRFNPITLREVPRLTCSVSLLINFEEGKDYMDWVIGVHGIWIEFINDHGHKKTATYLPEVIPEQGWTKEEAIESLLRKGGYRGSINDKVLKSIKLTRYQSSKAQATYKEYIDHKENSQ 200          
The following BLAST results are available for this feature:
BLAST of Gcaud9827.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX82_9FLOR8.700e-12281.95AMMECR1 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q557_CHOCR1.130e-7963.83AMMECR1 domain-containing protein n=1 Tax=Chondrus... [more]
M2W5A9_GALSU6.120e-4544.79AMMECR1 family n=1 Tax=Galdieria sulphuraria TaxID... [more]
A0A1X6NLF3_PORUM4.520e-4240.80AMMECR1 domain-containing protein n=1 Tax=Porphyra... [more]
A0A7S4INH1_9STRA6.520e-4145.36Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
D7FUU4_ECTSI7.310e-4142.93AMMECR1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1Y2B7T5_9FUNG9.220e-4145.26AMMECR1 domain-containing protein n=1 Tax=Rhizoclo... [more]
A0A6V1N2W4_HETAK4.640e-4042.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1E4N2_HEMAN5.800e-4038.66Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8H7VTL7_9FUNG1.360e-3939.90AMMECR1 domain-containing protein n=1 Tax=Mucor ci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 22..191
e-value: 8.1E-45
score: 152.4
IPR002733AMMECR1 domainPROSITEPS51112AMMECR1coord: 8..203
score: 23.908127
IPR023473AMMECR1TIGRFAMTIGR00296TIGR00296coord: 22..190
e-value: 8.9E-29
score: 98.5
IPR023473AMMECR1PANTHERPTHR13016AMMECR1 HOMOLOGcoord: 14..206
IPR027485AMMECR1, N-terminalGENE3D3.30.700.20Hypothetical protein ph0010; domain 1coord: 11..137
e-value: 1.2E-29
score: 104.6
NoneNo IPR availablePANTHERPTHR13016:SF0ALPORT SYNDROME, MENTAL RETARDATION, MIDFACE HYPOPLASIA AND ELLIPTOCYTOSIS CHROMOSOMAL REGION GENE 1 HOMOLOG (HUMAN)coord: 14..206
IPR036071AMMECR1 domain superfamilySUPERFAMILY143447AMMECR1-likecoord: 15..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_155_length_42800_cov_4.630125contigNODE_155_length_42800_cov_4.630125:33315..33941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9827.t1Gcaud9827.t1Gracilaria caudata M_176_S67 malemRNANODE_155_length_42800_cov_4.630125 33315..33941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9827.t1 ID=Gcaud9827.t1|Name=Gcaud9827.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=209bp
MAPSMVDEAPSRTEATVQMCARAFETIATQLRPDLPSPPDFDLPSREGGV
FVTWSVPRGRDSHYSLRGCIGTLTPAPLHTAVPRYAAQAAFHDSRFDPIS
SSELTKLKVGVSVLSQFEPAQHVYDWTAGVHGIVLYLPGGYSATYLPEVC
AEHGWTKEFCVRSLAEKAGFRGLVDESVLGSATVTRYQSSKTELAFDGYI
KMIEDAKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002733AMMECR1_domain
IPR023473AMMECR1
IPR027485AMMECR1_N
IPR036071AMMECR1_dom_sf