Gcaud9808.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9808.t1
Unique NameGcaud9808.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length497
Homology
BLAST of Gcaud9808.t1 vs. uniprot
Match: A0A2V3IEE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 380 bits (977), Expect = 9.750e-126
Identity = 211/406 (51.97%), Postives = 270/406 (66.50%), Query Frame = 0
Query:   90 CQFKKVKPDASHVVRRTDEFFVSFIGMSVAAHDYEIGFSTHKTDNELLMYSMQCLTRSQGLNHQQREVEEELEREKISPPNQXXXXXXXXDASLSTPEVDVEGDRPRNEGVVTTTIDVEQETAQNARV-TTGIPSEDRVYIHYDPVVDARNTGTKADTFVNIPATKRLYTCSEQLMLTEKHGDDDNGDHENQKSHCLESLFVRFTVMEIDRISDLQARAVIGVDHFGSFVSQNAGSIPYIQLLTKAFAVASSVGKQGLRKYSRPDHVLTVDKEFFLAN-PEGDSGVTTNTDE---VKQENFLRYGYYFFLSKPVQAKLYTRTSSADEHIPLMLKRTDRR-PKPGAPECEYIPLTEVSYVVLKVRRGCCKLSPDQMVRRSEGHRLRLDNMLTMSTAIEVLAEAERKK 489
            C+  KV+PDA +VVR TDEF +SF+GMSVA+HD   G S HK+DNELL+YS++C T S   N      EEE  ++++                LS   VD EG          ++     E A+  +V TT   + D V+IHYDPV DA NTGT ADTFVN+PA+KR Y CS++++   K+      + E     CL+ + V+FTVMEID+ISD+QARAV+GVDH GSF+S  AGSIPYI LLTKAFAV SS+GK GL+ YSRPDHVL+ D EF LAN P  D       DE    K+EN+LRYGYYFFLS  V AKLYT T++ D+ +PLM+KR +    +     C Y PLTEVSYVV+KV RGCC LS +++ +RSEGH++RL+NML++S A+EVLAEAERK+
Sbjct:    4 CEMDKVRPDAKNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVKCATNSSLPNA--TIAEEETTQDELE---------------LSEKNVDDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGANNDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKN------NQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNEDGENDESVRTKKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQHCRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENMLSISNALEVLAEAERKR 386          
BLAST of Gcaud9808.t1 vs. uniprot
Match: A0A2V3III8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 243 bits (619), Expect = 3.090e-71
Identity = 169/485 (34.85%), Postives = 259/485 (53.40%), Query Frame = 0
Query:   26 SMSTIVRRDALQGVINSGLRQQRFLGRLINFVPGLSHRRVSVEANKNCAAASVFYAPHQR------GITPCQFKKVKPDASHVVRRTDEFFVSFIGMSVAAHDYEIGFSTHKTDNELLMYSMQCLTRSQGLNHQQREVEEELEREKISPPNQXXXXXXXXDASLSTPEVDVEGDRPRNEGVVTTTIDVEQETAQNARVTTGIPS--EDRVYIHYDPVVDARNTGTKADTFVNIPATKRLYTCSEQLMLTEKHGDDDNGDHENQKSHCLESLFVRFTVMEIDRISDLQARAVIGVDHFGSFVSQNAGSIPYIQLLTKAFAVASSVGKQGLRKYSRPDHVLTVDKEFFLAN---PEGD---SGVTTNTDEVKQENFLRYGYYFFLSKPVQAKLYTRTSSADEHIPLMLKRTDRRPKPGAP-ECEYIPLTEVSYVVLKVRRGCCKLSPDQMVRRSEGHRLRLDNMLTMSTAIEVLAEAERKK--SSLR 493
            S+S +V  + L+G  N+GLR+     R   F      RRVSVEA        VFYAP +         T  Q+ ++ PD  ++V++ DEF +SF+GM+++  D    F+ +K  NEL++YS+   + S      Q          KIS  N         +  + + +V  +  +P+          + +  + ++R+   + +  +D  +IHYD   D R TGTK +TFV IPA+K +Y    +     +  DDD              + VRF V++ID++SD Q  AV G+   G FV + A ++PY +L+ +AF   +++GK+GLRKYS PDHVL VD +F LAN   P GD   S  T  T+   + N+LRYGYYFFL K V AKLY +T S+ +++PL+L+RTD   K     E E+ P+T VSYVV+KV   C     +Q +   + H+ RLD +L +   +E+L + ++++  SSLR
Sbjct:   10 SISILVHPNDLKGSANNGLRKGNRFSRRTCF---RRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSRTATQYIRITPDVDNLVKKGDEFEISFVGMNISPQDL---FACNK--NELVLYSLTSGSDSAKCEWAQ----------KISSANSLKVNMQ--NGFVVSDQVAPDQSQPK----------IRRVASIDSRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFRRSCRRREIDDDD--------------ISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAILQVGNILEMLEKNKKRREPSSLR 450          
BLAST of Gcaud9808.t1 vs. uniprot
Match: A0A2V3ID24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 4.780e-57
Identity = 161/468 (34.40%), Postives = 235/468 (50.21%), Query Frame = 0
Query:   27 MSTIVRRDALQGVINSGLRQQRFLGRLINFVPGLSHRRVSVEANKNCAAASVFYAP--------HQRGITPCQFKKVKPDA-SHVVRRTDEFFVSFIGMSVAAHDYEIGFSTHKTDNELLMYSMQCLTRSQGLNHQQREVEEELEREKISPPNQXXXXXXXXDASLSTPEVDVE-----GDRPRNEGVVTTTIDVEQETAQNARVTTGIPSE--DRVYIHYDPVVDARNTGTKADTFVNIPATKRLYTCSEQLMLTEKHGDDDNGDHENQKSHCLESLFVRFTVMEIDRISDLQARAVIGVDHFGSFVSQNAGSIPYIQLLTKAFAVASSVGKQGLRKYSRPDHVLTVDKEFFLANPEGDSGVTTNTDEVKQENFLRYGYYFFLSKPVQAKLYTRTSSADEHIPLMLKRTDRRPK-PGAPECEYIPLTEVSYVVLKVRRGCCKLSPDQMVRRSEGHRLRLDNMLTMST 477
            +S IV R +LQ   +  LR++ +  R +   P  + RRV VEA++   A S+ +AP        HQR +   +F KV  +  S VVR  D+F VSFIG+SVA  DY IG      DNE+L+ S+     ++  +HQ  EV E L     S  N         DA  +  E DV      G     +GVV   I  +Q+T   + + T +P    D  ++H+DP  D  +TG++ DTF  IP TKRL+        T   G +            +  + +RFTVMEID++++ Q  A+  ++     V + A S+P ++ ++     A++VG+  L+K +RPDHV++ D  F LA PE  S         +  N+LRYGYYFFL  PV AKL+ +T ++  ++ L++K    R K     E EY PL+ VSYVV+KV RGC      Q       H  RL  +L   T
Sbjct:   23 ISIIVLRKSLQSATSDSLRKRDWHERCL---PLPTRRRVFVEASEYGTADSILFAPERPNANESHQR-VAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDY-IG------DNEMLLCSL-----ARREDHQ--EVLEYLASSAYSTINSSNSSV---DAHKNGTEEDVAVRSDVGKTNERDGVVP--IPPKQKTVDLSDLPTALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGN------------VRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEPEVSSNDGRTIQREEYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLLKKYT 455          
The following BLAST results are available for this feature:
BLAST of Gcaud9808.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEE2_9FLOR9.750e-12651.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3III8_9FLOR3.090e-7134.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID24_9FLOR4.780e-5734.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_649_length_20269_cov_4.054118contigNODE_649_length_20269_cov_4.054118:16930..18503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9808.t1Gcaud9808.t1Gracilaria caudata M_176_S67 malemRNANODE_649_length_20269_cov_4.054118 16930..18503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9808.t1 ID=Gcaud9808.t1|Name=Gcaud9808.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=497bp
MSSTFETAVASATDDSTRKKQTSAKSMSTIVRRDALQGVINSGLRQQRFL
GRLINFVPGLSHRRVSVEANKNCAAASVFYAPHQRGITPCQFKKVKPDAS
HVVRRTDEFFVSFIGMSVAAHDYEIGFSTHKTDNELLMYSMQCLTRSQGL
NHQQREVEEELEREKISPPNQAPNQASNQDASLSTPEVDVEGDRPRNEGV
VTTTIDVEQETAQNARVTTGIPSEDRVYIHYDPVVDARNTGTKADTFVNI
PATKRLYTCSEQLMLTEKHGDDDNGDHENQKSHCLESLFVRFTVMEIDRI
SDLQARAVIGVDHFGSFVSQNAGSIPYIQLLTKAFAVASSVGKQGLRKYS
RPDHVLTVDKEFFLANPEGDSGVTTNTDEVKQENFLRYGYYFFLSKPVQA
KLYTRTSSADEHIPLMLKRTDRRPKPGAPECEYIPLTEVSYVVLKVRRGC
CKLSPDQMVRRSEGHRLRLDNMLTMSTAIEVLAEAERKKSSLRPRL*
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