Gcaud9801.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9801.t1
Unique NameGcaud9801.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length649
Homology
BLAST of Gcaud9801.t1 vs. uniprot
Match: A0A2V3IIQ4_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ4_9FLOR)

HSP 1 Score: 852 bits (2200), Expect = 1.060e-304
Identity = 476/657 (72.45%), Postives = 529/657 (80.52%), Query Frame = 0
Query:    1 MTAVPSEQSALPKQWADEMALASSTLSSSASLPKSPP-----DTLGARVFDSQLDGFLHRFQHQILAARALKDDLDRFASHDDP--LYQLKKRNFKLKMEHIRSLFATEGEHFVSSLERTNPKLTIAACGQNTIELAQGIERLQSAVDEEQSKRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA--LAAITPLSSPDRPTHNVVSAHPASTVGHTLNNLSSEETLQLMQSDIQALKLELMRLHRVKATASPNNGLPPPYAPPSAASSRPDTPALTSSTVSPDAKGSNAPPIPASILANNNVSVVRVTGRSTAPNYVSHLEQMKTRLEALEKKPLSRRAKSAARLGRTQTMSSMYETRAGDENQNPNVSAMVTPPRGVRR-QHRSVSTTSPPVAASRKPLTPPPLEQFRSEVSPHTTPSPVRLGRERTSASPARLYFDAPEDMLSRPQSHAAARDIQRYSLKVSRRFGPSEMEMPAEPRAKSAVTVSPSRRRGAMQEGGKSVGNALAEVPAPLGPPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHPFFGKAICLFSYDSGGGVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRTETKEYFFAAETDEIRRNWIKELKDAARKDAGRMLHTTKGRSMAFRRR 647
            M  +P  + ALP+QWADEMALA+S  S   S    PP     +TLG  +FD+QLDGFL RFQ +I+ ARALKDDLD+  + DD   +Y  KK+ FKLKM HIRSLF+TEGE FV SLER NPKLT+AACG+NTIELAQGIERL++AV EE++KR A        XXXXXXX            A  +  ITPLSSPDR T  VV+ HP S VGHTLNNL+S+ETLQLMQSDIQALKLELMRL R KA A+  + LPPPY P S  S   D  + T STVS + K S APPIPASILANNNVSVVRVTGRSTAPNYVSHLEQMK+RLEALEKKPLSRR KSAARLGRTQTM SMYE  + DEN NPNVSAMVTPPR  RR +HRSVS+ SP   A++  +TPPP E FR E S H+TPSPVR G +++S SPARLYFDAPED+L+RPQSHAAARDIQRYSLKVSRR GP+E  + AEPRAKSAVTVSP+RRRG MQEGG SVGNA+++    LGPPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSH FFGK +CLFSYDSGGGVISTRSQIVVL NSLCKAL+EKLEIGGQERFMFVLRT++KEYFFAAETDEIRRNWIKELKDAARKD GR+LH+ KGRSMAFRRR
Sbjct:    1 MATLPRHKPALPQQWADEMALATSATSPLPSNLPPPPATTPAETLGGPLFDTQLDGFLDRFQQEIVVARALKDDLDQLTNRDDTDAVYHSKKQLFKLKMHHIRSLFSTEGEQFVKSLERRNPKLTMAACGENTIELAQGIERLETAVKEEETKRTASKPTATNAXXXXXXXPSAPRAPLSFQKASDITVITPLSSPDRETSTVVTPHPPSAVGHTLNNLNSDETLQLMQSDIQALKLELMRLQRTKAHAT--SALPPPYVPKSMTSPS-DNQSFTLSTVSAEVK-STAPPIPASILANNNVSVVRVTGRSTAPNYVSHLEQMKSRLEALEKKPLSRRTKSAARLGRTQTMGSMYEPVSADENHNPNVSAMVTPPRASRRMKHRSVSSASP--LANKAVVTPPPTEHFRIERSSHSTPSPVRPGADKSSTSPARLYFDAPEDLLTRPQSHAAARDIQRYSLKVSRRLGPAEPVLIAEPRAKSAVTVSPNRRRGVMQEGGMSVGNAVSDAGGALGPPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHQFFGKVMCLFSYDSGGGVISTRSQIVVLHNSLCKALKEKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAARKDTGRLLHSNKGRSMAFRRR 651          
BLAST of Gcaud9801.t1 vs. uniprot
Match: A0A5J4YVX2_PORPP (PH domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVX2_PORPP)

HSP 1 Score: 65.9 bits (159), Expect = 2.070e-8
Identity = 32/104 (30.77%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  523 GDMWVRKGVVWKRWRRRYASIVSHPFFGKAICLFSYDSGGGVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRTETKEYFFAAETDEIRRNWIKELKDAA 626
            GD+++R+      W++R+A++V H +FG  + LF YD    +++  SQ++VL  S  K   +     G  R  F L+T  ++Y F+      R  WI+ L+  A
Sbjct:  125 GDLFIRQKFFTTMWKKRFATVVDHAYFGPVLFLFKYDKKNHIVAKTSQMIVLQESDSKLADDVRGSDGVYRCQFTLKTGKRKYVFSTSDALGREYWIELLRSYA 228          
The following BLAST results are available for this feature:
BLAST of Gcaud9801.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIQ4_9FLOR1.060e-30472.45PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
A0A5J4YVX2_PORPP2.070e-830.77PH domain-containing protein n=1 Tax=Porphyridium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..275
NoneNo IPR availableCDDcd00821PHcoord: 521..622
e-value: 6.98405E-10
score: 54.4709
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 514..628
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 519..629
e-value: 4.9E-7
score: 39.4
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 520..626
e-value: 1.5E-6
score: 28.7
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 518..627
score: 10.8499
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 519..635
e-value: 1.8E-10
score: 42.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_649_length_20269_cov_4.054118contigNODE_649_length_20269_cov_4.054118:71..2017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9801.t1Gcaud9801.t1Gracilaria caudata M_176_S67 malemRNANODE_649_length_20269_cov_4.054118 71..2017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9801.t1 ID=Gcaud9801.t1|Name=Gcaud9801.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=649bp
MTAVPSEQSALPKQWADEMALASSTLSSSASLPKSPPDTLGARVFDSQLD
GFLHRFQHQILAARALKDDLDRFASHDDPLYQLKKRNFKLKMEHIRSLFA
TEGEHFVSSLERTNPKLTIAACGQNTIELAQGIERLQSAVDEEQSKRAAA
ATASVTASAAASAAPRPTRTPTPPPPALAAITPLSSPDRPTHNVVSAHPA
STVGHTLNNLSSEETLQLMQSDIQALKLELMRLHRVKATASPNNGLPPPY
APPSAASSRPDTPALTSSTVSPDAKGSNAPPIPASILANNNVSVVRVTGR
STAPNYVSHLEQMKTRLEALEKKPLSRRAKSAARLGRTQTMSSMYETRAG
DENQNPNVSAMVTPPRGVRRQHRSVSTTSPPVAASRKPLTPPPLEQFRSE
VSPHTTPSPVRLGRERTSASPARLYFDAPEDMLSRPQSHAAARDIQRYSL
KVSRRFGPSEMEMPAEPRAKSAVTVSPSRRRGAMQEGGKSVGNALAEVPA
PLGPPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHPFFG
KAICLFSYDSGGGVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRT
ETKEYFFAAETDEIRRNWIKELKDAARKDAGRMLHTTKGRSMAFRRRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf