Gcaud9790.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9790.t1
Unique NameGcaud9790.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length272
Homology
BLAST of Gcaud9790.t1 vs. uniprot
Match: A0A2V3IY52_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY52_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 5.740e-96
Identity = 161/262 (61.45%), Postives = 193/262 (73.66%), Query Frame = 0
Query:    3 RSARLFRRVASPTCTASNGENGESEDMWQQALQELFLETLRTYYQTTPMLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKCCDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECPPSK 264
            R  R   R + P  +A+N  + E  ++W  A++ LF+E LRTYY+  PMLTD EFQTLRDE+++LGKNQ+RL  MEK+WVQATS+RDFDRRVREEF++SEE+LR+LK  LL           A      D+      L        + CDA RIDADA ++ERLKW IFTDA EER KI+LLYLPAVLMSFVTASV TILFALLDGEM ITV+ AGRFRLGILSY+VV++T++ SNQVTP MLDYLDLGQP+LLRGECP  K
Sbjct:   68 RRQRPPNRQSVPRASANNHRHEEPSELWNAAVEALFVELLRTYYERMPMLTDSEFQTLRDEVQYLGKNQLRLHDMEKIWVQATSARDFDRRVREEFQVSEEQLRSLKQNLLNTD-----GGGAHGGAADDKSANGVNLLGASSSDTRECDAERIDADAHVEERLKWLIFTDANEERLKILLLYLPAVLMSFVTASVLTILFALLDGEMTITVSTAGRFRLGILSYLVVMLTIYISNQVTPFMLDYLDLGQPTLLRGECPSCK 324          
BLAST of Gcaud9790.t1 vs. uniprot
Match: A0A7S1TAJ9_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAJ9_9RHOD)

HSP 1 Score: 176 bits (447), Expect = 3.050e-50
Identity = 95/240 (39.58%), Postives = 136/240 (56.67%), Query Frame = 0
Query:   22 ENGESEDMWQQALQELFLETLRTYYQTTPMLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKCCDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECP 261
            E G  + +W  AL+ LF E +  YY+ TP+ T  EF+ LRDE+  LG   +RL  ME+ WV A   ++FDR  + EF +++EELR +K  + K     R   S                           DA +  AD+    RL++ +F DA +ER KI L+Y PA + S +  S+ ++LF L DGE+ + +T  GR RLG+ S VV  +T+WF+N VTPV+LDYLDLG+P L++G CP
Sbjct:   45 EGGLGDTVWDDALEGLFAEAVENYYRGTPLYTQEEFRALRDEMSFLGAESVRLGAMERAWVVAAQQQEFDRTFKNEFNLTDEELRRIKEAVEKVHRQSRTRTSGN-------------------------DAEQYSADSDPGPRLQYLLFGDAVQERLKIFLIYAPAAISSVLACSIISVLFLLFDGEVVLNITTVGRLRLGLASAVVATLTIWFTNTVTPVLLDYLDLGRPILMKGNCP 259          
BLAST of Gcaud9790.t1 vs. uniprot
Match: M2XEH7_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XEH7_GALSU)

HSP 1 Score: 170 bits (431), Expect = 3.310e-47
Identity = 103/259 (39.77%), Postives = 150/259 (57.92%), Query Frame = 0
Query:   18 ASNGENGESEDMWQQ---------------ALQELFLETLRTYYQTTPMLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKCCDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECP 261
            A  G+N ES D   Q               AL+ LFLE L +YY+ TPM ++ EF TLRDEL+HLG    RL  +E +WVQA+  RDFDR  + EFE+S+ E+++LK KLL+    + P+          +  +    R L  R+ +       +++A +D  L++ +F DAT +RFK+++LY PA L++ + +S   I F L DGE+ + ++A GR R  +L  V+V    WF+N VTP +L YLDLG P LL+G CP
Sbjct:   72 AFGGDNPESRDNLSQNFERKRKLGSEEELAALETLFLEGLLSYYEGTPMFSEEEFHTLRDELDHLGSTSTRLHNLEVMWVQASQQRDFDRNFQNEFELSQSEMKSLKEKLLEERKARPPLAEDLALATKRKIQQ----RSLVRRAAR-------ESEAALDNSLRYLLFGDATLDRFKLLVLYAPAALLAGIMSSFMAISFFLFDGEVEVRISAIGRLRFFLLLAVIVYGVGWFTNFVTPRILRYLDLGHPLLLKGHCP 319          
BLAST of Gcaud9790.t1 vs. uniprot
Match: M1VHK8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHK8_CYAM1)

HSP 1 Score: 167 bits (422), Expect = 3.230e-46
Identity = 95/239 (39.75%), Postives = 138/239 (57.74%), Query Frame = 0
Query:   23 NGESEDMWQQALQELFLETLRTYYQTTPMLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKCCDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECP 261
            +G ++  ++ AL+ LF+E LR+YY+  P+LTDGEF+TLRDELEHLG + +RL+ +EKVW+QA   RD DRR+  E  +S EEL  LK KL  +      + S                               + +D+ MD+RL + +F DA E+RFK++LLY PAVL+   +   F +L  +  G +++T       R  +L  V+ ++T WFSN +TP ML YLDLG P ++RG CP
Sbjct:   77 DGNNDGEYRGALENLFIEALRSYYEGNPVLTDGEFKTLRDELEHLGSSSLRLNDLEKVWIQAAQQRDMDRRLLNELRLSPEELDGLKAKLGASRTSTLDMQSI------------------------------LKSDSSMDKRLMYLLFGDAVEDRFKLLLLYAPAVLLCLSSILGFALLDLICLGHIQLTFDDQVAVRASVLFVVIAVVTAWFSNYLTPRMLSYLDLGSPEVVRGPCP 285          
BLAST of Gcaud9790.t1 vs. uniprot
Match: A0A7J7IJE8_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJE8_9RHOD)

HSP 1 Score: 136 bits (343), Expect = 2.930e-35
Identity = 84/216 (38.89%), Postives = 125/216 (57.87%), Query Frame = 0
Query:   23 NGESEDMWQQALQELFLETLRTYYQTTPMLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKCCDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSN 238
            +G+ +  ++ AL+ LF+E LR+YY+  P+LT+GEF+TLRDELEHLG + IRL+ +EKVW+QA   RD DRR++ E  +S EEL  LK KL            A  T   D       L+ +            + +D+ MD+RL + +F DA E+RFKI+LLY PAVL+   +   F +L  +  G ++++       R  +L  ++ L+T WFSN
Sbjct:   70 SGKGDGEYRNALESLFMEALRSYYEGNPVLTEGEFRTLRDELEHLGSSSIRLNDLEKVWIQAAQQRDLDRRLQNELRLSPEELDGLKAKL-----------GASRTSSLD-------LQSI------------LKSDSSMDKRLLYLLFGDAVEDRFKILLLYAPAVLLCLSSIIGFALLDLICLGHVQLSFDDQFSVRAPVLFVIITLVTAWFSN 255          
The following BLAST results are available for this feature:
BLAST of Gcaud9790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IY52_9FLOR5.740e-9661.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TAJ9_9RHOD3.050e-5039.58Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
M2XEH7_GALSU3.310e-4739.77Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
M1VHK8_CYAM13.230e-4639.75Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7J7IJE8_9RHOD2.930e-3538.89Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..271
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 220..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_278_length_32496_cov_4.509582contigNODE_278_length_32496_cov_4.509582:4263..5288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9790.t1Gcaud9790.t1Gracilaria caudata M_176_S67 malemRNANODE_278_length_32496_cov_4.509582 4263..5288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9790.t1 ID=Gcaud9790.t1|Name=Gcaud9790.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=272bp
MTRSARLFRRVASPTCTASNGENGESEDMWQQALQELFLETLRTYYQTTP
MLTDGEFQTLRDELEHLGKNQIRLDRMEKVWVQATSSRDFDRRVREEFEI
SEEELRALKTKLLKAGIVQRPVPSARVTPHHDEHDEEDELRVLEGRSGKC
CDARRIDADARMDERLKWFIFTDATEERFKIMLLYLPAVLMSFVTASVFT
ILFALLDGEMRITVTAAGRFRLGILSYVVVLMTVWFSNQVTPVMLDYLDL
GQPSLLRGECPPSKQKYEAPD*
back to top