Gcaud9708.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9708.t1
Unique NameGcaud9708.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length304
Homology
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A2V3IFH3_9FLOR (Putative rRNA methyltransferase YlbH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH3_9FLOR)

HSP 1 Score: 294 bits (753), Expect = 8.940e-98
Identity = 141/182 (77.47%), Postives = 161/182 (88.46%), Query Frame = 0
Query:  120 MAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFINLK 301
            MAKVREAVFSML M DAL RDGTCLDLFAGCGSVGIEALSRGM +A+FVDYSR CV SI  NLANC F++R L VCSRVE+F++DG +YN G+ Y LITITPPYEEV+Y KLM+ V+ES+CVGEGTFVVVEYPVEL +FP SI +RLVG+RNRRYGRTVIA+YACQP VDIELRP+EF++LK
Sbjct:    1 MAKVREAVFSMLYMQDALRRDGTCLDLFAGCGSVGIEALSRGMEQAVFVDYSRECVQSIDANLANCEFAERGLTVCSRVEQFVKDGERYNNGRHYDLITITPPYEEVDYGKLMKMVSESNCVGEGTFVVVEYPVELGSFPPSIGHRLVGVRNRRYGRTVIAVYACQPDVDIELRPEEFVSLK 182          
BLAST of Gcaud9708.t1 vs. uniprot
Match: R7QRG5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRG5_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 1.660e-88
Identity = 135/221 (61.09%), Postives = 168/221 (76.02%), Query Frame = 0
Query:   53 DDQLSPGKAYAPRQQRGGGRRFRGFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRR 273
            +D+ +  K  APR+QRGGGR  RG VR QGK    + LPP PPGLRV+SG+ +GR+I+SPNVYLRPMMAKVREA+FSML+M   L  D   LDLFAG GS+GIE+LSRGMG+A+FVD +  C ++I++NL NC F  +   VC+RVE F+++GAK N  + Y LIT+TPPYEEV YS LM  +A SDCVGE TFVVVEYPVEL + P  I +RL+G+RNRR
Sbjct:   90 EDKWTTEKIRAPRRQRGGGRERRGSVRIQGKYYRPKALPPQPPGLRVSSGTARGRKIKSPNVYLRPMMAKVREALFSMLEMFQVLRSDCVTLDLFAGSGSIGIESLSRGMGRAVFVDAAHECTETIEENLINCRFDAQGQTVCARVENFVKNGAKLNNNQHYNLITVTPPYEEVNYSDLMTAIALSDCVGEDTFVVVEYPVELKSLPPVIGHRLIGLRNRR 310          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A6T6ADP0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6ADP0_9RHOD)

HSP 1 Score: 252 bits (643), Expect = 7.220e-78
Identity = 128/250 (51.20%), Postives = 172/250 (68.80%), Query Frame = 0
Query:   59 GKAYAPRQQR------GGGRRFR---GFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFIN 299
            G+  APR+ R      GG  + +   G  R QGK      +PP    LRV  G+++GRR+RSP+VY+RPMM +VREA+FSML  LDA+   G  LD F+G G+VGIEALSRGM  A F+D+SR CV++ + NLA+C    R   VC+RVE+   +  ++    P  +I++TPPYEEV+Y +L+  +A SD VGEGT +VVEYP+EL T P S+ +R+VG+RNRRYGRTV+A+YACQP VD+  RP+EFI 
Sbjct:  170 GRIVAPRRSRYGLPVTGGKEKDKSSLGRGRVQGKPVEGYYVPPQ---LRVMGGALRGRRLRSPSVYMRPMMGRVREALFSMLTQLDAVKNGGRFLDCFSGSGAVGIEALSRGMSTATFIDFSRDCVEATEANLAHCGLRARGTTVCARVEDVFANPTRFGLYDPIDVISVTPPYEEVDYGQLLTLMASSDLVGEGTHLVVEYPIELKTLPPSLVHRMVGLRNRRYGRTVVAVYACQPDVDVRPRPEEFIR 416          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A7S1ESE5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESE5_9RHOD)

HSP 1 Score: 248 bits (633), Expect = 9.970e-78
Identity = 129/240 (53.75%), Postives = 171/240 (71.25%), Query Frame = 0
Query:   59 GKAYAPRQQRGGGRRFRGFVRSQGKKCLAERLPPNPPG-LRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEF 297
            GK  APR+   G ++    +R+QG+  L   +P      LR+  GS KGR+I SP+VYLRPMM KVREA+FSML+  D L  + + LDL++G GSV IEALSRG+G A+FVD+S +    I  NLA C F++R  +VC++VE+ L++   +   + + L+TITPPYEEV+Y +L+ ++A+SDCVGEGT VV+EYPVEL T P+ I NRL+G+RNRRYGRTVIAIYACQP  D E R  EF
Sbjct:   71 GKIDAPRRGVVGAKKAN--IRTQGRP-LQRGVPEKKRNVLRIFGGSAKGRKIISPDVYLRPMMGKVREALFSMLNEFDLLRPENSALDLYSGSGSVCIEALSRGIGSAVFVDFSHSSTQVIDGNLAACGFTERGRSVCAKVEDVLKEPQIHGIRRHFDLVTITPPYEEVDYGELITSIAQSDCVGEGTHVVIEYPVELGTLPSVIMNRLIGMRNRRYGRTVIAIYACQPSTDYEPRSSEF 307          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A7S1TKC5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKC5_9RHOD)

HSP 1 Score: 248 bits (632), Expect = 1.410e-77
Identity = 131/239 (54.81%), Postives = 162/239 (67.78%), Query Frame = 0
Query:   59 GKAYAPRQQRGGGRRFRGFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEF 297
            GK  APR+   G   ++  V +QG+  L          LRV  GS KGR+IRSP VY RPMM KVREA+FSML   + L  D   LDL++G GSV IEALSRG+G A+FVDYS      I DNLA C F  R  +VC+ VE+ LRD A +   +P  LIT+TPPYEEV+Y +L+ ++A+SDCVGEGTF+V+EYPVEL   P  + +RL+G+RNRRYGRT +AIYACQP  D E R DEF
Sbjct:   74 GKVSAPRKGVVGA--YKAEVNAQGR-LLRGVKQQQLNVLRVFGGSAKGRKIRSPEVYHRPMMGKVREALFSMLADFEVLREDCAALDLYSGSGSVCIEALSRGIGSAVFVDYSAESAAVIDDNLAVCGFGTRGRSVCASVEDVLRDPAPFGIDRPLDLITVTPPYEEVDYGELITSIAQSDCVGEGTFIVIEYPVELRALPPVVMSRLIGMRNRRYGRTALAIYACQPGQDFEPRHDEF 309          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A7S1H813_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H813_HEMAN)

HSP 1 Score: 238 bits (608), Expect = 8.590e-75
Identity = 127/243 (52.26%), Postives = 171/243 (70.37%), Query Frame = 0
Query:   60 KAYAPRQQRGG-GRRFRGFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLR--DGAKYNYGKPYA-LITITPPYEEVEYSKLMQTVAESDCV-GEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEF 297
            K  A RQ+RGG     R  V++QGKK   + + P PP +RV++GS KGR+++SP+VYLRPMM KV+EA+FS L   D L  + T  D FAGCGSVGIEALS+G+G+AIFVDYS+   + I +NLA C F +R+L +CS+ E F    + A     +P   +++ITPPYEEV YS L+  VAE+D + G+G+FVVVEYPVEL   P  I  R+VG++NR+YGRT++AIY  +P VD+  RP+EF
Sbjct:    7 KVVADRQRRGGKSTGTRQTVKTQGKKW--DTVKPTPPTIRVSTGSAKGRKLKSPDVYLRPMMGKVKEALFSFLREWDVLQEESTFCDTFAGCGSVGIEALSQGVGRAIFVDYSKEACNVIGENLALCGFDERALVICSKAESFYTSPERALARIERPRVDVLSITPPYEEVVYSDLLTMVAEADALLGDGSFVVVEYPVELGLLPPVIGGRMVGMKNRKYGRTMLAIYCIRPGVDLYPRPEEF 247          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A5J4YUW6_PORPP (Putative rRNA methyltransferase YlbH n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUW6_PORPP)

HSP 1 Score: 238 bits (608), Expect = 5.860e-74
Identity = 134/286 (46.85%), Postives = 183/286 (63.99%), Query Frame = 0
Query:   17 GNPQTCPTTSAKTFRVKISAKRD---VHVDRREEVQVPVDDQLSPGKAYAPRQQRGGGRRFRGFVRSQGKKCLAERLPPNPPG-LRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFI 298
            G  +T      K    + S ++D     VDR E      D+    G+  APR+   G +R     R QG+  L   +P      LRV  G+ KGR+I SP VY RPMM KVREA+FS+L   D L  + + LDL++G GSV IEALSRG G A FVD+S +   +I +NL  C F++R +A+C++VE+ L+   ++   +   LIT+TPPYEEV+Y +L+  +A+SDCVGEG+FVVVEYP+EL + P  + +RL+G+RNR+YGRTV+AIYACQP VD+E R DEFI
Sbjct:   33 GGSRTVAVLEMKQLGSRRSRRQDGRGADVDRVERA----DEDFRLGRVKAPRRGVVGAKRAN--TREQGR--LLRGVPEKKLNVLRVFGGTAKGRKIMSPEVYHRPMMGKVREALFSILYDFDVLRPECSALDLYSGSGSVCIEALSRGTGFAHFVDFSESSCSAIAENLERCQFAERGVAICAKVEDVLQRPREFGIERHADLITVTPPYEEVDYGELLVALAKSDCVGEGSFVVVEYPIELGSLPPVVMDRLIGMRNRKYGRTVLAIYACQPPVDMEPRQDEFI 310          
BLAST of Gcaud9708.t1 vs. uniprot
Match: L1JRE4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRE4_GUITC)

HSP 1 Score: 238 bits (606), Expect = 1.640e-73
Identity = 125/242 (51.65%), Postives = 163/242 (67.36%), Query Frame = 0
Query:   65 RQQRGGGRRFRGFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDG----AKYNYGKPYALITITPPYEEVEYSKLMQTVAESD-CVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFINLK 301
            RQ RG     RG V+ QGK    + + P PP +RVA G+ KGR++  P VYLRPMM KV+EA+FS+L   D L  D   LD FAGCGSVGIEALSRG+GKA+FVDYS+   ++I+ NL  C F DR + VCS+ E    D     AK   GK + L+T+TPPYEEV+Y  L+  + +S+  + +G  VVVEYP+EL + P  + NRLVG+RNR+YGRT++AIYAC P  ++E RP EF  L+
Sbjct:   81 RQTRGDIVGTRGSVKVQGKGW--DNILPKPPTIRVAGGTAKGRKLNRPEVYLRPMMGKVKEALFSILTEFDVLRDDAIALDTFAGCGSVGIEALSRGVGKAVFVDYSKEACNTIRGNLEVCEFEDRGMVVCSKAEAIYDDPVQVLAKMG-GKGFDLLTMTPPYEEVDYGDLLGRITKSEHLMNDGCIVVVEYPIELGSLPPVVGNRLVGMRNRKYGRTMLAIYACNPGSNMEPRPQEFGTLR 319          
BLAST of Gcaud9708.t1 vs. uniprot
Match: A0A7S3ADP2_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ADP2_9RHOD)

HSP 1 Score: 226 bits (577), Expect = 3.570e-69
Identity = 128/271 (47.23%), Postives = 167/271 (61.62%), Query Frame = 0
Query:   59 GKAYAPRQQRGGGRRFR-GFVRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLD------------------ALPRD-----------GTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFIN 299
            GK  APR  + G R+F+ G V+ QGKK + E +P   P LR+  GS KGR++ SP+VY+RPMM KVREAV+SM+ +L                   AL  D           G  +D+F G GSVG+EALSRG+ +A+FVD S  C ++ + N+ +C F  R  A+    E+ L    +Y       LIT+TPPYEEV+Y +LM   A SD VGEGTF+VVEYPVEL +   +  +RLVGIRNR+YGRTVIAIYACQP   ++ RPDEF +
Sbjct:   52 GKVSAPRASKYGKRKFQVGNVKQQGKKYV-EYVPA--PQLRITGGSAKGRKLTSPDVYMRPMMGKVREAVYSMVGLLSFRNENEVLGFQLVFLLTHALAGDKQLYQFDALEGGMAVDMFCGSGSVGLEALSRGLDQAVFVDLSPVCTETCEKNVVHCGFEGRGRAINCTAEQMLLHPERYGVEGHAKLITLTPPYEEVDYGELMYAAAGSDLVGEGTFLVVEYPVELGSLEPAYRHRLVGIRNRKYGRTVIAIYACQPPRFVDPRPDEFAS 319          
BLAST of Gcaud9708.t1 vs. uniprot
Match: M2VUV8_GALSU (Putative N6-adenine-specific methylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VUV8_GALSU)

HSP 1 Score: 221 bits (564), Expect = 4.060e-67
Identity = 110/220 (50.00%), Postives = 151/220 (68.64%), Query Frame = 0
Query:   78 VRSQGKKCLAERLPPNPPGLRVASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGCGSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEEFLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVEYPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEF 297
            + SQGK+   + LPP  P L V +GSVKGRR+ +P VY+RPMM+KVR A+F ML  +  L  +   LD+FAG G+VGIEALS+ +GKA+FVD S  C  ++++NL  C FSDR  A CS  E+F+ +  ++     + L+T+TPPYEE++Y+ LM T+A S  +G G+ VVVEYP+EL   P  I  RLVG+RNRRYGRTV+ +Y   P   ++ RP+EF
Sbjct:   81 IYSQGKRIRMD-LPP--PRLYVNAGSVKGRRLLNPPVYIRPMMSKVRSALFCMLTDMKLLRPEYRILDIFAGTGAVGIEALSQNVGKAVFVDSSPDCCATVRENLERCRFSDRGDAFCSTYEDFVDNPGRFQVKGTFELVTLTPPYEEIDYNTLMSTIATSSLIGPGSVVVVEYPIELGVMPPVIMERLVGLRNRRYGRTVLGLYGVDPEPPLDARPEEF 297          
The following BLAST results are available for this feature:
BLAST of Gcaud9708.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFH3_9FLOR8.940e-9877.47Putative rRNA methyltransferase YlbH n=1 Tax=Graci... [more]
R7QRG5_CHOCR1.660e-8861.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T6ADP0_9RHOD7.220e-7851.20Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1ESE5_9RHOD9.970e-7853.75Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TKC5_9RHOD1.410e-7754.81Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1H813_HEMAN8.590e-7552.26Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A5J4YUW6_PORPP5.860e-7446.85Putative rRNA methyltransferase YlbH n=1 Tax=Porph... [more]
L1JRE4_GUITC1.640e-7351.65Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S3ADP2_9RHOD3.570e-6947.23Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
M2VUV8_GALSU4.060e-6750.00Putative N6-adenine-specific methylase n=1 Tax=Gal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03602Cons_hypoth95coord: 97..282
e-value: 1.4E-38
score: 132.4
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 92..291
e-value: 1.3E-44
score: 153.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..74
NoneNo IPR availablePANTHERPTHR43542METHYLTRANSFERASEcoord: 97..285
NoneNo IPR availablePANTHERPTHR43542:SF1METHYLTRANSFERASEcoord: 97..285
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 97..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_743_length_18853_cov_4.482944contigNODE_743_length_18853_cov_4.482944:3116..4168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9708.t1Gcaud9708.t1Gracilaria caudata M_176_S67 malemRNANODE_743_length_18853_cov_4.482944 3116..4168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9708.t1 ID=Gcaud9708.t1|Name=Gcaud9708.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=304bp
LGRYLVPEKTFINDKTGNPQTCPTTSAKTFRVKISAKRDVHVDRREEVQV
PVDDQLSPGKAYAPRQQRGGGRRFRGFVRSQGKKCLAERLPPNPPGLRVA
SGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDMLDALPRDGTCLDLFAGC
GSVGIEALSRGMGKAIFVDYSRACVDSIKDNLANCSFSDRSLAVCSRVEE
FLRDGAKYNYGKPYALITITPPYEEVEYSKLMQTVAESDCVGEGTFVVVE
YPVELCTFPTSINNRLVGIRNRRYGRTVIAIYACQPHVDIELRPDEFINL
KRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases