Gcaud970.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud970.t1
Unique NameGcaud970.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length241
Homology
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BLAST of Gcaud970.t1 vs. uniprot
Match: A0A2V3IPB0_9FLOR (Pre-B-cell leukemia transcription factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPB0_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 6.750e-81
Identity = 138/239 (57.74%), Postives = 178/239 (74.48%), Query Frame = 0 
Query:    1 MNVNVQKANVTDIAQLVLSGNAVARAMQSPVNSAEQSRITHPKGPLWIQRLSYSQESGFETSGESWKVPTDVPFAEQVAYYRRIMKELDAPPKPKARKKRYVRTRDAPLTLADLRGDVTGIISMKYDSRLVEISSSPSPAGVLLQAALDQLTRTSFSFRLVGVDRMIGDIPIDNVQTLGSFEEGVLDIGTTLIQNQEQFGAEVDCRLTSAGSLQASAMLDNVPAGLMIRYVQAPVDIDG 239
            +NVNV KANV DIAQL+LSGNAVA AMQ+P++S    R+ HP GP WI+RLS S +   E   E W+VPT++PF+EQV YY +++ E    PK ++RK+ + R R A   L+D+ GDVTGIIS+KYDSRL E ++  S    LLQA LDQL+R SFSFRL G D M+GDIPID V+  GSFEEGVLDIG  L+Q++++FGAEV CR+T +GS+ A+A++DN PA L+ RY+QAPV I G
Sbjct: 1087 VNVNVHKANVKDIAQLILSGNAVASAMQTPLSSDGIGRVIHPNGPEWIRRLSLSTDPEIEDLSEVWEVPTNIPFSEQVVYYHQLLAEELEFPKRRSRKRSHPRPRKAAPRLSDVHGDVTGIISIKYDSRLGEENAGASTGSALLQAVLDQLSRASFSFRLTGTDWMVGDIPIDKVEASGSFEEGVLDIGPLLLQSRQEFGAEVQCRVTRSGSVSAAAIVDNAPAALVNRYMQAPVSIAG 1325
The following BLAST results are available for this feature:
BLAST of Gcaud970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPB0_9FLOR6.750e-8157.74Pre-B-cell leukemia transcription factor 3 n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1981_length_7357_cov_4.652766contigNODE_1981_length_7357_cov_4.652766:6225..6947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud970.t1Gcaud970.t1Gracilaria caudata M_176_S67 malemRNANODE_1981_length_7357_cov_4.652766 6225..6947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud970.t1 ID=Gcaud970.t1|Name=Gcaud970.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=241bp
MNVNVQKANVTDIAQLVLSGNAVARAMQSPVNSAEQSRITHPKGPLWIQR
LSYSQESGFETSGESWKVPTDVPFAEQVAYYRRIMKELDAPPKPKARKKR
YVRTRDAPLTLADLRGDVTGIISMKYDSRLVEISSSPSPAGVLLQAALDQ
LTRTSFSFRLVGVDRMIGDIPIDNVQTLGSFEEGVLDIGTTLIQNQEQFG
AEVDCRLTSAGSLQASAMLDNVPAGLMIRYVQAPVDIDGT*
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