Gcaud9650.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9650.t1
Unique NameGcaud9650.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length246
Homology
BLAST of Gcaud9650.t1 vs. uniprot
Match: A0A2V3J497_9FLOR (Putative NAD kinase 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J497_9FLOR)

HSP 1 Score: 378 bits (970), Expect = 1.300e-127
Identity = 192/246 (78.05%), Postives = 215/246 (87.40%), Query Frame = 0
Query:    1 MRRLYLSLLLEDLLSHVRHWYARDLHKPPLQNLCARLGHLRHVLRTRTSDDSELRASIRHLLWLLRQALEAYDPPSYLRASLERARSASLDIPRRRNDAAEVALLREQIALGMELSALRTLEQHVHILLTTNFPQEADALLSETQLACALLGKDDYRVRGKRRLVVALANLRATLCDRDGADSTCKTLQEMEHKLLGSFENDLKVKRPVGNAMLLRPGLHDIPNFDVVQEGFLRGGQPSSSGLQWL 246
            +RRL LSLLL+DLLSHVRHWYA+DLHK PLQNL ARL HLRH LRTR SDDS LRASIRHLLWLLRQALE+Y+PP YLRASLERARSASLDIPRRR+DA+E ALLREQIALG ELSALR LE  V  LL  NFPQ+A  LL +T+ ACALLG DDYRVRGKRRLV ALA LR+T+C+R+G+   C+ L +ME KL+GSFENDLK+KRPVG+AMLLRPGLHDIPNFDVV+E FLRGGQPS+SGL+WL
Sbjct:   91 LRRLNLSLLLDDLLSHVRHWYAKDLHKAPLQNLYARLTHLRHTLRTRASDDSALRASIRHLLWLLRQALESYNPPFYLRASLERARSASLDIPRRRDDASEAALLREQIALGTELSALRALEDDVERLLQRNFPQQAHFLLRDTRRACALLGTDDYRVRGKRRLVHALAGLRSTICEREGSQIACERLADMERKLIGSFENDLKLKRPVGHAMLLRPGLHDIPNFDVVEERFLRGGQPSTSGLEWL 336          
BLAST of Gcaud9650.t1 vs. uniprot
Match: R7QHC9_CHOCR (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHC9_CHOCR)

HSP 1 Score: 152 bits (384), Expect = 1.670e-39
Identity = 106/264 (40.15%), Postives = 145/264 (54.92%), Query Frame = 0
Query:    1 MRRLYLSLLLEDLLSHVRHWYARDLHKPPLQNLCARLGHLRH-VLRTRTSDDSELRASIRHLLWLLRQALEAYDPPSYLRASLERARSASLDIPRRRNDAAE-------VALLREQIALGM-------ELSALRTLEQHVHILLTTNFPQEADALLSETQLACALLGKDDYRVRGKRRLVVALANLRATLCDRDGADSTCK---TLQEMEHKLLGSFENDLKVKRPVGNAMLLRPGLHDIPNFDVVQEGFLRGGQPSSSGLQWL 246
            +R+  LSLLL DL++ +R      +   PL +L     +L   VL     ++ +LRA IR +LW LR  L+  +P   LR SLE ARS+ LDIP R N  +E        AL+R ++   M       EL +LR LE+ ++ ++   +P   +  LS    A ALLG DDYRVRGK RL  A+ +LR  L    G     +    +  + + L+ S   DL V++P G AMLLRP + DIPNF VV +  LRGGQPSS GL+WL
Sbjct:  108 LRQQRLSLLLADLVARIRCEKPLSVGTAPLYDLLRHTDNLSEAVLTDDAHENHDLRAEIRSMLWELRTVLDPLNPSEALRTSLEVARSSFLDIPGRVNANSEGPSAPRDEALVRSEMYALMVTNVLLEELRSLRVLERQLNDVVVRLYPNRVEPQLSVASDASALLGIDDYRVRGKMRLADAVLDLRKALRREVGRPLLPEINDAINVLHNALIKSLHTDLSVRQPAGEAMLLRPRMDDIPNFAVVSQSILRGGQPSSRGLKWL 371          
BLAST of Gcaud9650.t1 vs. uniprot
Match: M1VJU6_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VJU6_CYAM1)

HSP 1 Score: 64.7 bits (156), Expect = 2.380e-8
Identity = 53/158 (33.54%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  104 LLREQIALGMELSALRTLEQHVHILLTT----NFPQEADALLSETQLACALLGKDDYRVRGKRRLVVALANLRATL--CDRDGADSTCKTLQEMEHKLLGSFENDLKVKRPV--------GNAMLLRPGLHDIPNFDVV-QEGFLRGGQPSSSGLQWL 246
            LL +   L +EL +LR L+  V +   +       + A   L E + A   L    YRVRG+ RL+ A  +    L   +R     T  T++     L  + E D+     +        G +MLLRP   DIPNF+VV     LRGGQP+S+G+QWL
Sbjct:  271 LLVQDNFLMLELLSLRILQHEVQLSCASWDWVQQDENAKRYLCELRDAATQLHLGTYRVRGRSRLLQAARSFAHYLGELERSSGLPTPSTVRHSLDMLQEALEEDMAYATLIPERAPALHGESMLLRPRPSDIPNFEVVLPRRLLRGGQPTSAGIQWL 428          
The following BLAST results are available for this feature:
BLAST of Gcaud9650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J497_9FLOR1.300e-12778.05Putative NAD kinase 2, chloroplastic n=1 Tax=Graci... [more]
R7QHC9_CHOCR1.670e-3940.15TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
M1VJU6_CYAM12.380e-833.54Uncharacterized protein n=2 Tax=cellular organisms... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3756_length_2982_cov_3.480802contigNODE_3756_length_2982_cov_3.480802:2..739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9650.t1Gcaud9650.t1Gracilaria caudata M_176_S67 malemRNANODE_3756_length_2982_cov_3.480802 2..739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9650.t1 ID=Gcaud9650.t1|Name=Gcaud9650.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=246bp
MRRLYLSLLLEDLLSHVRHWYARDLHKPPLQNLCARLGHLRHVLRTRTSD
DSELRASIRHLLWLLRQALEAYDPPSYLRASLERARSASLDIPRRRNDAA
EVALLREQIALGMELSALRTLEQHVHILLTTNFPQEADALLSETQLACAL
LGKDDYRVRGKRRLVVALANLRATLCDRDGADSTCKTLQEMEHKLLGSFE
NDLKVKRPVGNAMLLRPGLHDIPNFDVVQEGFLRGGQPSSSGLQWL
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