Gcaud9645.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9645.t1
Unique NameGcaud9645.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length257
Homology
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A2V3ILR8_9FLOR (Mitochondrial inner membrane protease subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR8_9FLOR)

HSP 1 Score: 414 bits (1065), Expect = 5.540e-144
Identity = 201/256 (78.52%), Postives = 235/256 (91.80%), Query Frame = 0
Query:    1 MRRRGVYRSVEYVVEKLSLDEREIVSTAAVSPSRRHEIVASVHPLNRLLPRFERRWPVDVALGDAVLWTYKRDLIRCALVTAAMSVSFVVLGLLGPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSVPDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRLHMPV 256
            MR+RGVYRSVEYV+EKL+LD +E+ +TA+V PSR HE+VA+V PLNRLLPRFER WPV+VA+GDAVLWTYKRDLIRCALVT AMSV+FV +GL+GP+VLGIYSIPTVSMEPSL+VGDALLVEK+SLRATPPRKGEIVLFTPPSRL+ IL SS Q  +S+R+PHRNDLF+KRVVAVPGDVIEVR+TGVFVN  K+D+ VP+SP+VAP  IP+G++FV+GDN  +SLDSRYWGLLPI+CVVGRPVA IFPPQRLH+PV
Sbjct:   60 MRQRGVYRSVEYVIEKLTLDGQEVFTTASVPPSRVHEVVATVRPLNRLLPRFERAWPVEVAVGDAVLWTYKRDLIRCALVTLAMSVTFVTIGLIGPTVLGIYSIPTVSMEPSLYVGDALLVEKISLRATPPRKGEIVLFTPPSRLKSILTSSNQHLASTRIPHRNDLFIKRVVAVPGDVIEVRLTGVFVNAVKIDEVVPNSPIVAPCTIPDGYIFVIGDNPSKSLDSRYWGLLPIECVVGRPVARIFPPQRLHVPV 315          
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 135 bits (339), Expect = 3.070e-34
Identity = 97/259 (37.45%), Postives = 132/259 (50.97%), Query Frame = 0
Query:    5 GVYRSVEY-VVEKLSLDEREIVSTAAVSPSRRHEIVASVHPLNRLLPRFERRWPVDVALGDAVLWTYKRDLIRCALV-TAAMSVSFVVLGLLGPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVT--GVFVNGRKVDDSVP--DSP------VVAPRN--IPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPP 249
            GVY  +EY ++    +D +E +      P    E+  SV P+  L  R ER WPV V+  D   +  +       LV TA  SVS V+  L     +  Y IP+ SMEP++H GD +L EKLS     P++GEI+LFTPP  L+ ++      ES        DLF+KRV A+PGDV+ V      V VNG +V    P  D P      +V P+   +  G  FV+GD    S+DSR WG L  D V  RP+  ++PP
Sbjct:   77 GVYPGIEYRLMGMRDIDTKETLFRV---PEGAGEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVV------ESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQGPTCDEPSGGAQGLVRPQKGKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWPP 326          
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 127 bits (319), Expect = 9.970e-31
Identity = 93/289 (32.18%), Postives = 135/289 (46.71%), Query Frame = 0
Query:    1 MRRRGVYRSVEYVVEKLSLDEREIVSTAAVSPSRRHEIVASVHPLNRLLPRFERRWPVDVALGDAVLWTYKRDLIRCALVTAAMSVS-FVVLGLLGPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSVPDSPVVAPRNIP-------------------------------------EGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQR 251
            M R+GVY  V+Y VE++ +        A   P R  + V +V P  RL+ + ER+WPV +A+ +  ++   R      L++  +S +  + + L+      +Y IP+ SMEP+LH GD LLVEK+S    PP+ G+IVLF PP +LR    + V++      P   DLFVKRV A  GD + V      +NG       P+ P     + P                                      G V+V+GDN  +S+DSR WG L    +VG PV  +FP  R
Sbjct:  131 MFRKGVYPGVDYRVERIDV-------RANGDPIR--DAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLR----TFVRQAGGQLAP--GDLFVKRVAATQGDRVTVDNGLPTINGHTYVYPEPEEPPTIGSDAPPARADGSMQRLAIGRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGR 404          
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A5J4YRP0_PORPP (Mitochondrial inner membrane protease subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRP0_PORPP)

HSP 1 Score: 121 bits (304), Expect = 1.250e-29
Identity = 80/193 (41.45%), Postives = 107/193 (55.44%), Query Frame = 0
Query:   68 WT--YKRDLIRCALVTAAMSVSFVVLGLL---GPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLR---HILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSVPDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRL 252
            WT   +RDL+  A   A +  + V LGL    G  V  +Y+IPT SM P+L+ GD LLVEKLS+   PP+  EIVLF PP  L    H L   VQ +         D FVKRV A  GDV+ V    V +N + V+ S   +    P  +P G+ FV+GDN  +S+DSRY+G +  D ++GRP+   FP  +L
Sbjct:   68 WTDEQRRDLVAFA--AATLIGNLVALGLFCLFGAQVASVYAIPTTSMVPTLNAGDGLLVEKLSIHVRPPQNNEIVLFHPPEELVNQVHKLGGHVQYK---------DTFVKRVAASGGDVVHVTHGQVLINSKFVE-SADAALEYGPVTVPHGYFFVLGDNECRSVDSRYFGFVSEDLLIGRPMLRCFPLNKL 248          
BLAST of Gcaud9645.t1 vs. uniprot
Match: U5D806_9CHRO (Signal peptidase I n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5D806_9CHRO)

HSP 1 Score: 116 bits (291), Expect = 1.540e-28
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSV----PDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRL 252
            IP+ SM P+L VGD L++EK+S R  PPR+GEIV+FTPP  L+     S Q             F+KRVVA+ GD + VR   VF++GR +D+S     P +  + P  +P   +FV+GDN   S DS  WG LP D  +GR V   +PP R+
Sbjct:   49 IPSESMLPTLEVGDRLVIEKVSYRFRPPRRGEIVVFTPPPLLQQQGYESDQA------------FIKRVVAIEGDRLRVRNGRVFLDGRPLDESAYIAEPPAYPLGPVVVPPESLFVMGDNRNNSRDSHIWGFLPADHALGRAVFRFWPPSRI 189          
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A8J5X9V5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9V5_DIALT)

HSP 1 Score: 117 bits (292), Expect = 6.410e-28
Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDS-VPDSP-VVAPR-NIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRLHM 254
            IP++SM P+  VGD L VEK+S R  P  + E+V+F PP     +          S  P  ND  +KR+VA+ GD +EVR   ++VNG +VD+  + + P    PR  +PEG VFV+GDN   S DS YWG LP + ++G+ V   +PP RL +
Sbjct:  120 IPSLSMFPAFEVGDQLAVEKVSKRFAPMARDEVVVFKPPPAFFEL----------SGKPQDNDALIKRIVAIAGDTVEVRNGELYVNGEQVDEPFIAERPEYTMPRFTVPEGCVFVLGDNRNHSFDSHYWGPLPEENIIGKAVLKYWPPWRLAL 263          
BLAST of Gcaud9645.t1 vs. uniprot
Match: UPI0017474B30 (signal peptidase I n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017474B30)

HSP 1 Score: 114 bits (284), Expect = 2.720e-27
Identity = 59/153 (38.56%), Postives = 91/153 (59.48%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDS----VPDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRL 252
            IP+ SMEP+L + D L+VEK+S    PP +G+IV+F+PP+        +V    +S     ++ F+KRV+ +PGD +EVR   VF+N + + +S    +P++P   P+ +P    FV+GDN   S DSR+WG +P   ++GR     FP  RL
Sbjct:   69 IPSSSMEPTLEINDRLIVEKISYLLHPPERGDIVVFSPPA--------TVAAACNSPASVAHEAFIKRVIGLPGDKVEVRQGTVFINNQPLPESYIAELPEAPT-KPQIVPPNTYFVMGDNRNNSCDSRFWGTVPHQNIIGRAAFRFFPFDRL 212          
BLAST of Gcaud9645.t1 vs. uniprot
Match: D5A289_ARTPN (Signal peptidase I n=8 Tax=Microcoleaceae TaxID=1892252 RepID=D5A289_ARTPN)

HSP 1 Score: 113 bits (282), Expect = 3.150e-27
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVD-DSVPDSPVV--APRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRL 252
            IP+ SM P+L + D L+++KLS R T P++G++V+F P   L      S+Q          ND F+KR++ +PG+ +EVR   VFVNG  ++ D + + P     P  IPEG   V+GDN   S DS YWG +P + ++GR V   +P  RL
Sbjct:   53 IPSGSMLPTLEINDRLIIDKLSYRFTEPQRGDVVVFNPTEEL------SLQY---------NDAFIKRIIGLPGETLEVRDGQVFVNGEPIEEDYIAEEPQYKWGPETIPEGEFLVLGDNRNNSFDSHYWGFVPRENIIGRAVVRFWPLDRL 189          
BLAST of Gcaud9645.t1 vs. uniprot
Match: K9QY14_NOSS7 (Signal peptidase I n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9QY14_NOSS7)

HSP 1 Score: 112 bits (281), Expect = 3.780e-27
Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSV---PDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQRLHM 254
            IP+ SM P+L+ GD L+VEK+S    PP  G+IV+F PP+ L+             R   ++  F+KRV+ VPG++I V    V++NG+ + +     P S    P  +PE   FV+GDN   S DSRYWG LP + ++G  V   +PP+R+ M
Sbjct:   48 IPSESMVPTLYEGDRLVVEKVSYHFHPPTTGDIVVFQPPTELQ------------KRGYPKDQAFIKRVIGVPGEIISVANGKVYLNGQPLTEDYIAEPPSQPFPPVKVPEDQFFVMGDNRNNSNDSRYWGFLPQENIIGHAVFRFWPPERMGM 189          
BLAST of Gcaud9645.t1 vs. uniprot
Match: A0A8J7ECT9_9CYAN (Signal peptidase I n=2 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7ECT9_9CYAN)

HSP 1 Score: 113 bits (283), Expect = 4.210e-27
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILMSSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDD---SVPDSPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQR 251
            IP+ SMEP+L V D L++EK+S R  PP+ G+IV+F PP             +S +    R D F+KRV+ +PGDVIEVR   VF NG  + +   + P +    P  +PE    V+GDN   S DSR WG +P D ++GR V   +P  R
Sbjct:   59 IPSGSMEPTLQVQDRLVIEKISYRFNPPQHGDIVVFWPP-------------DSLTPPGQRRDAFIKRVIGIPGDVIEVRDGVVFRNGEALVEPYIAEPPNDPYGPTTVPEDAYLVMGDNRNNSYDSRVWGFVPKDNIIGRAVVRFWPLGR 196          
The following BLAST results are available for this feature:
BLAST of Gcaud9645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILR8_9FLOR5.540e-14478.52Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S0Y0G9_HEMAN3.070e-3437.45Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A0G4EFP7_VITBC9.970e-3132.18Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A5J4YRP0_PORPP1.250e-2941.45Mitochondrial inner membrane protease subunit n=1 ... [more]
U5D806_9CHRO1.540e-2843.14Signal peptidase I n=1 Tax=Rubidibacter lacunae KO... [more]
A0A8J5X9V5_DIALT6.410e-2841.56Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
UPI0017474B302.720e-2738.56signal peptidase I n=1 Tax=Phormidium tenue TaxID=... [more]
D5A289_ARTPN3.150e-2739.47Signal peptidase I n=8 Tax=Microcoleaceae TaxID=18... [more]
K9QY14_NOSS73.780e-2738.96Signal peptidase I n=1 Tax=Nostoc sp. (strain ATCC... [more]
A0A8J7ECT9_9CYAN4.210e-2741.06Signal peptidase I n=2 Tax=Nodosilinea sp. LEGE 07... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 97..113
score: 35.71
coord: 209..228
score: 51.43
coord: 168..180
score: 50.55
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 86..248
e-value: 4.9E-30
score: 102.5
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 79..252
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 96..254
e-value: 1.7E-29
score: 104.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..256
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 86..244
e-value: 5.7E-33
score: 114.2
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 101..242
e-value: 9.95102E-18
score: 73.7739
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 170..182
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 214..227
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 99..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_493_length_23805_cov_4.148056contigNODE_493_length_23805_cov_4.148056:20993..21763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9645.t1Gcaud9645.t1Gracilaria caudata M_176_S67 malemRNANODE_493_length_23805_cov_4.148056 20993..21763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9645.t1 ID=Gcaud9645.t1|Name=Gcaud9645.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bp
MRRRGVYRSVEYVVEKLSLDEREIVSTAAVSPSRRHEIVASVHPLNRLLP
RFERRWPVDVALGDAVLWTYKRDLIRCALVTAAMSVSFVVLGLLGPSVLG
IYSIPTVSMEPSLHVGDALLVEKLSLRATPPRKGEIVLFTPPSRLRHILM
SSVQRESSSRMPHRNDLFVKRVVAVPGDVIEVRVTGVFVNGRKVDDSVPD
SPVVAPRNIPEGFVFVVGDNARQSLDSRYWGLLPIDCVVGRPVACIFPPQ
RLHMPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR019758Pept_S26A_signal_pept_1_CS
IPR036286LexA/Signal_pep-like_sf