Gcaud9643.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9643.t2
Unique NameGcaud9643.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length574
Homology
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A2V3ISR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR8_9FLOR)

HSP 1 Score: 899 bits (2324), Expect = 0.000e+0
Identity = 442/532 (83.08%), Postives = 496/532 (93.23%), Query Frame = 0
Query:   43 THYGQGRGDARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSAEYVEKVFKDAESGAIGEA-PCPLCLDIIDDPVAPKECGHPACRICMMESLKRANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFSTS 573
            THYGQ RGD+RSIS+L +DVVVTSYGTLAAECSE+T+NGEE  P+DGPL QL+WRRIILDEAHTIKSR TKWAKA+YKI+AER WCVTGTVIHNHVNDVFSLLHFLDV+PWSSWAFWNR IV+NLESND+ RQ+TAMSLIRDIISSVTLRRKK TKDS G+ IVQLTKKTV+LV+LT SSQERDFY+A+H+RS++QFDTYL++ KVMHNYAS+LELLLRLRQAC+HPYLVFAAAPSKDS VM+D+DKL+++FMEAGSSAEYV+KVFKD +SGA+G+A  CPLCLD+IDDPVAPKEC HP CR+CMMESLKRANKCPVCR+PI+ ESV TLPR++RFS+DLS++WRSSAKIDELLKDVR RQ++R  SKG GIGKTVIFSQFTSMLDLVG ALDR++F+WLRIDGSVPQAQRALIL +FE E E + D SNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVL+KRYII+DTVEEKLL+VQ RKQ IADGALEVATDEDRK+AKLSELKLLFS S
Sbjct:    2 THYGQNRGDSRSISILCSDVVVTSYGTLAAECSEDTANGEEPSPKDGPLLQLKWRRIILDEAHTIKSRSTKWAKAAYKIKAERRWCVTGTVIHNHVNDVFSLLHFLDVRPWSSWAFWNRGIVANLESNDLKRQRTAMSLIRDIISSVTLRRKKNTKDSRGERIVQLTKKTVELVQLTSSSQERDFYNALHKRSRVQFDTYLSEGKVMHNYASILELLLRLRQACNHPYLVFAAAPSKDSAVMRDKDKLYKQFMEAGSSAEYVDKVFKDVQSGALGKALQCPLCLDVIDDPVAPKECAHPVCRVCMMESLKRANKCPVCRVPISNESVMTLPRESRFSIDLSKRWRSSAKIDELLKDVRERQDVRNRSKGNGIGKTVIFSQFTSMLDLVGVALDRQSFKWLRIDGSVPQAQRALILQQFENEDEKAKDSSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLIKRYIIRDTVEEKLLKVQERKQHIADGALEVATDEDRKQAKLSELKLLFSVS 533          
BLAST of Gcaud9643.t2 vs. uniprot
Match: R7QA79_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA79_CHOCR)

HSP 1 Score: 739 bits (1908), Expect = 7.540e-252
Identity = 364/518 (70.27%), Postives = 431/518 (83.20%), Query Frame = 0
Query:    8 KASLGGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRGDARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPR----DGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSAEYVEKVFKDAESGAIGEAP-CPLCLDIIDDPVAPKECGHPACRICMMESLKRANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDV 520
            K+  GGTLIVCPTSLVTQW+N+L  HV  NFLR  T+YG  RG+A SISL  ADVVVT+YG LAAE S+N  N E    +     GP+FQLQWRR+ILDEAHTIKSRVTKWA+A++ ++AE+ WCVTGTVIHNHVNDVFSLLHFL VKPWSSWAFWNR IVS +ES D+A QK +MSL+RDIISS+TLRR+K+TKDS G+ I+ L KK V++V L PS +ERDFY+A+H R+K QFDT++ + KVM NYAS+LELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLF++F++AGSS+++VEK+F DAESG + ++  CPLCLD+IDD VAP+ECGHPACR C++E ++R  +CPVCR  IT ES+ATLPR  RFSVDL  +WRSSAKID LLKD+   Q  R+ +  +G+GKTV+FSQFTSMLDLVG ALDR   + LRIDGSVPQAQRA IL++FE E ELS   SN+LLVSLRAGGVGLNL AAS AILLDIHWNPQVDAQAQDR+HRHGQTRD+
Sbjct:  831 KSGQGGTLIVCPTSLVTQWMNELHHHVALNFLRAVTYYGNSRGNALSISLQCADVVVTTYGILAAEYSDNPLNSETDKSKRKSSGGPVFQLQWRRVILDEAHTIKSRVTKWARAAFSLKAEKRWCVTGTVIHNHVNDVFSLLHFLRVKPWSSWAFWNRGIVSGIESKDVAAQKVSMSLLRDIISSMTLRRRKSTKDSQGRAIICLPKKHVEIVSLIPSPEERDFYAALHDRTKTQFDTFVREGKVMKNYASILELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFKQFLQAGSSSQFVEKIFNDAESGTLQKSKECPLCLDVIDDAVAPRECGHPACRSCLLECVQRTKRCPVCRADITFESIATLPRATRFSVDLKTRWRSSAKIDALLKDLAEIQTRRKQNGAEGVGKTVVFSQFTSMLDLVGMALDRAKIKSLRIDGSVPQAQRATILERFENEKELSLSTSNVLLVSLRAGGVGLNLCAASCAILLDIHWNPQVDAQAQDRVHRHGQTRDL 1348          
BLAST of Gcaud9643.t2 vs. uniprot
Match: R7QLY7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QLY7_CHOCR)

HSP 1 Score: 530 bits (1366), Expect = 3.840e-183
Identity = 265/388 (68.30%), Postives = 324/388 (83.51%), Query Frame = 0
Query:  185 IISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSAEYVEKVFKDAESGAIGEAP-CPLCLDIIDDPVAPKECGHPACRICMMESLKRANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            IISS+T+RR+K+TKD  G+ I+ L KK V++V L PS +ERDFY+A+H R+K QF+T + + KVM NYAS+LELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLF++F++AGSS+++VEK++ DAESG +  +  CPLCLD+IDD VAP+ECGHPACR C++E ++R  +CPVCR  IT ES+ATLPR  RFSVDL  +WRSSAK+D LLKD+   Q LR+ +  +G+GKTV+FSQFTSMLDLV  ALDR   + LRIDGSVPQAQRA IL++FE E ELS   SN+LLV LRAGGVGLNL AAS AILLDIHWNPQVDAQAQDR+HRHGQTRDV++KRYI+  +VEE+LL+VQ RKQ IADGAL  AT +D+K+A L+ELKLLF+
Sbjct:   18 IISSMTMRRRKSTKDFQGRAIICLPKKHVEIVSLIPSPEERDFYAALHDRTKTQFNTSVREGKVMKNYASILELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFKQFLQAGSSSQFVEKIYNDAESGTLQRSKECPLCLDVIDDAVAPRECGHPACRSCLLECVQRTRRCPVCRADITFESIATLPRATRFSVDLKTRWRSSAKVDALLKDLAEIQTLRKQNGAEGVGKTVVFSQFTSMLDLVWMALDRAKIKSLRIDGSVPQAQRATILERFENEKELSLPTSNVLLVFLRAGGVGLNLCAASCAILLDIHWNPQVDAQAQDRVHRHGQTRDVVIKRYIVNGSVEEQLLKVQKRKQDIADGALGAATKKDKKQAGLTELKLLFA 405          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A5P1E2S7_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E2S7_ASPOF)

HSP 1 Score: 434 bits (1117), Expect = 8.740e-142
Identity = 240/582 (41.24%), Postives = 371/582 (63.75%), Query Frame = 0
Query:    6 KKKASL--GGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRG-DARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSA-----------EYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKRAN--KCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            K KA L  GG+LI+CP +L+ QW  +++ HV P  L V  HYGQ R  DA+ ++   +D+V+T+YG LA+E S  + N EE    +G L+ +QW RI+LDEAH IKS  ++ + A+  + A+R WC+TGT I N + D++SLL FL ++PW +W  W+++I    E  +    +  + L++ I+  + LRR K++ D  G+ I+ L    V+++    ++ E+DFY A+ +RSK++FD ++AQ +V+HNYAS+LELLLRLRQ CDHP+LV +   +++ +   D +KL +RF++ G  A            Y+++V ++  +G  GE  CP+CL++ +D V    C H  CR C++ S   A    CPVCR  I R+ + T P  +RF +D+ + W  S+KI  LL+D+   + LR +       K+++FSQ+T+ LDL+   L R NF +LR+DG++ Q QR  ++++F ++  +      +LL+SL+AGGVG+NL AAS A LLD  WNP V+ QA  RIHR GQTR V +KR+I+K TVEE++  VQ+RKQ +  GAL   TD++ + A++ ELK+LF+
Sbjct:  124 KFKAPLIGGGSLIICPMTLLGQWKAEIETHVQPGTLTVYVHYGQSRPRDAKFLAQ--SDIVLTTYGVLASEYS--SENSEE----NGGLYSVQWFRIVLDEAHIIKSSKSQISIATAALAADRRWCLTGTPIQNKLEDIYSLLRFLRIEPWGNWGLWHKLIQKPYEEGN----ERGLKLVQSILRQIMLRRTKSSTDRDGRPIIVLPPARVEIIYCEMTAAEKDFYDALFKRSKVKFDQFVAQGRVLHNYASILELLLRLRQCCDHPFLVKSRGDTREFL---DLNKLAKRFLQGGKDAIGKESNILQSEAYIKEVVEELRNGEEGE--CPICLEVYEDAVLTP-CAHRLCRECLLASWSNATTGSCPVCRSIINRQELITAPTSSRFQIDIEKNWIESSKISVLLQDL---ENLRSSGS-----KSILFSQWTAFLDLLEIPLSRRNFTFLRLDGTLNQQQREKVINQFTEDDNIL-----VLLMSLKAGGVGINLTAASNAFLLDPWWNPAVEEQAVMRIHRIGQTRTVSIKRFIVKGTVEERMEAVQARKQKMISGAL---TDQEVRTARIEELKMLFT 671          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A6P6U1C3_COFAR (DNA repair protein RAD5A-like isoform X1 n=6 Tax=Coffea TaxID=13442 RepID=A0A6P6U1C3_COFAR)

HSP 1 Score: 439 bits (1129), Expect = 3.170e-139
Identity = 241/580 (41.55%), Postives = 367/580 (63.28%), Query Frame = 0
Query:    6 KKKASLGGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRGDARSISLLG-ADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGS-----------SAEYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKRANK--CPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            K   + GG LI+CP +L+ QW  +++ H  P  L +  HYGQ R  +R   +LG +DVV+T+YG LA+E S   ++        G LF ++W R++LDEAHTIKS  ++ + A+  + A+R WC+TGT I N++ D++SLL FL V+PW SWA+WN+++    E  D AR   ++ L++ I+  + LRR K++ D  G+ I+ L    + ++    +  ERDFY A+ +RSK++FD ++ Q +V+HNYAS+LELLLRLRQ CDHP+LV +   +++     D +KL RRF++ G            S  YVE+V ++   G +GE  CP+CL+  +D V    C H  CR C++ S + +    CPVCR  IT++ + T P ++RF +D+ R W  S+K+  LL ++ I   LR A       K+++FSQ+T+ LDL+  AL R + ++LR+DG++ Q QR  ++ +F +E  +      +LL+SL+AGGVG+NL AAS A +LD  WNP V+ QA  RIHR GQT  V++KR+I+K TVEEK+  VQ+RKQ +  GAL   TD++ + A++ ELK+LF+
Sbjct:  509 KNFLTCGGNLIICPMTLIGQWKAEIETHAQPGTLSIYIHYGQNR--SRDALVLGQSDVVLTTYGVLASEFSAENADVT------GGLFSVRWFRVVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLKVEPWGSWAWWNKLVQKPFEEGD-AR---SLKLVQSILKPIMLRRTKSSTDKEGRPILVLPPADIQVIYCELTEAERDFYDALFKRSKVKFDKFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQE---FSDLNKLTRRFLKVGQDIVDGQARDVPSLAYVEEVVEELRKGEVGE--CPICLEAFEDAVLTP-CAHRLCRECLLASWRSSTSGFCPVCRKMITKQELLTAPTQSRFRIDIERNWVESSKVSALLHELEI---LRLAGS-----KSIVFSQWTAFLDLLQIALSRSDIQFLRLDGTLNQQQRENVIKQFSEEDNIM-----VLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTEKVMIKRFIMKGTVEEKMEAVQARKQRMISGAL---TDQEVRSARIEELKMLFA 1054          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A1U8MH77_GOSHI (putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8MH77_GOSHI)

HSP 1 Score: 431 bits (1108), Expect = 1.140e-138
Identity = 237/579 (40.93%), Postives = 360/579 (62.18%), Query Frame = 0
Query:    6 KKKASLGGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRGDARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSA-----------EYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKRANK--CPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            + K + GG LI+CP +L+ QW  +++ HV P  L +  HYGQ R     + L   DVV+T+YG LA+E S    N E+    +G L+ ++W RI+LDEAHTIKS  ++ + A+  + A+R WC+TGT I N + D++SLL FL V+PW +W +WN++I    E  D    +  + L++ I+  + LRR K + D +GK I+ L    V ++    S  E+DFY A+ +RSK++FD ++ Q +V+HNYAS+LELLLRLRQ CDHP+LV +   +++     D +KL +RF+  G S             YV++V ++   G  GE  CP+CL+  +D V    C H  CR C++ S +  N   CPVCR  +T++ + T P ++RF VD+ + W  S K+  LL+++   + LR +       K+++FSQ+T+ LDL+   L R N  +LR+DG++ Q QR  ++ +F ++ ++      +LL+SL+AGGVG+NL AAS A +LD  WNP V+ QA  RIHR GQT+ V +KR+I+K TVEE++  VQ+RKQ +  GAL   TDE+ + A+L ELK+LF+
Sbjct:  270 RNKLANGGNLIICPMTLLGQWKAEIETHVQPGSLSLYVHYGQSRPKDAKL-LAQNDVVITTYGVLASEFS--AENSED----NGGLYSVRWFRIVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNKLEDLYSLLRFLKVEPWGNWPWWNKLIQKPFEEGD----QRGLKLVQSILKPIMLRRTKCSTDRYGKPILVLPPADVQVIYCELSEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYT---DLNKLAKRFLRGGQSTLDGEAKDLPSRAYVQEVVEELRKGEQGE--CPICLEAFEDAVLTP-CAHRLCRECLLASWRNPNSGLCPVCRKTVTKQELITAPTESRFQVDVEKNWVESTKVVVLLQEL---ENLRSSGS-----KSILFSQWTAFLDLLQIPLSRNNIPFLRLDGTLNQQQREKVIKQFSEDGKIM-----VLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQKMISGAL---TDEEVRTARLEELKMLFT 815          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A7S2ZR06_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR06_9RHOD)

HSP 1 Score: 435 bits (1119), Expect = 2.880e-138
Identity = 244/587 (41.57%), Postives = 358/587 (60.99%), Query Frame = 0
Query:   12 GGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGR--GDARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSA-----------------------EYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESL--KRANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            GGTL+VCPT++++QW  ++  H   + LRVT  YG  R   +   ++L  +DVVVT+YG LA++ + N             L + +W R+ILDEAH IKS  TK A+A++++ A  +WC+TGT + N  ND++SLL F+ + PW +  FWNR ++S   S      + A  +IR +++ V LRR K  +   G+ +++L ++  ++  +     ERDFY+A++ RS+  FDTY+AQ KV+ N  SVL LLLRLRQ CDHP+L F +APS D  +MK+  +  +RF++  +SA                       E + K FKD +     E  CP+CLD+++D V    CGH ACR C+      K +  CPVCR PI ++ V T PR +RFS+D++ KW+ S+K+  LL D++    +RE S      K V+FSQ+TSMLDL+   L + +  +LR+DG+VP  QR +IL +F    +     +N+LLVS +AGGVGLNL  A+  I+LD  WNP V+ QA  R+HR GQ + V VKRY++KD+VEE+LL VQ  KQ + +G +E  T  + +EA+L E+KLLFS
Sbjct:  445 GGTLVVCPTTILSQWQEEIATH--SDGLRVTQFYGVKRLSQNVEVLTLEESDVVVTTYGILASDSTGNRF-----------LTRTKWHRVILDEAHCIKSGKTKTARAAFELEASSYWCLTGTPVQNQPNDLYSLLRFMKLSPWGNQRFWNREVMSKHNSGSTEEVQNARVIIRHVLAPVMLRRTKHDRTPDGRRLLELPERITEVCRIVQEPPERDFYNALYSRSRTSFDTYVAQGKVLSNMVSVLTLLLRLRQCCDHPFL-FLSAPSSDVDLMKNLSRFAKRFVDPSASARGGGGDEDGRPSQSDIGRPSAYKENMVKAFKDGKRMETEE--CPICLDMMEDAVIAA-CGHGACRDCLSHCFGSKDSAFCPVCRAPIQQQQVLTAPRSSRFSIDINEKWQPSSKVSRLLADLK---SIRENSSRD---KVVVFSQWTSMLDLLEVPLTKASIAFLRLDGAVPPQQRPIILKEFANSGD-----ANVLLVSTKAGGVGLNLTMANHVIILDPWWNPAVEEQAIGRVHRIGQDKKVYVKRYVVKDSVEERLLDVQRMKQELVNGVVE-QTPAEAREARLEEIKLLFS 1002          
BLAST of Gcaud9643.t2 vs. uniprot
Match: UPI001CB8BD98 (DNA repair protein RAD5A isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8BD98)

HSP 1 Score: 435 bits (1119), Expect = 5.760e-138
Identity = 238/580 (41.03%), Postives = 365/580 (62.93%), Query Frame = 0
Query:    6 KKKASL--GGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRGDARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSA----------EYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKRANK--CPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            K+K SL  GG LI+CP +L+ QW  +++ H  P  L +  HYGQ R     I L   DVV+T+YG +A+E S  + N EE     G LF ++W R++LDEAHTIKS  ++ + A   + A+R WC+TGT I N + D++SLL FL ++PW SWA+WN++I    E+ D+      +SL+++I+  + LRR K + D  G+ I+ L    + ++    +  E+DFY A+ +RSK++FD ++ Q +V+HNYAS+LELLLRLRQ CDHP+LV +   ++D     D  KL +RF++ G  A           Y+++V K+ + G  GE  CP+CL+  +D V    C H  CR C++ S +  N   CPVCR  ++++ + T P  +RF VD+ + W  S+K+  LL+++   + LR +       K+++FSQ+T+ LDL+   L R N  ++R+DG++ Q QR  ++ +F +ES++      +LL+SL+AGGVG+NL AAS A +LD  WNP V+ QA  RIHR GQT+ V +KR+I+K TVEE++  VQ+RKQ +  GAL   TD++ + A++ ELK+LF+
Sbjct:  486 KQKQSLIGGGNLIICPMTLIGQWKAEIETHGEPGALSIYVHYGQSRPKDAKI-LAHNDVVLTTYGVVASEFS--SENAEE----RGGLFSVRWFRVVLDEAHTIKSSKSQISMAVATLVADRRWCLTGTPIQNSLEDIYSLLRFLRIEPWGSWAWWNKLIQKPFEAGDVR----GLSLVQNILRPIMLRRTKFSTDKEGRPILVLPPAEMQVIYCEQTEAEKDFYDALFKRSKVKFDQFIEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQD---FSDLGKLAKRFLKGGKDAIEEGKEAPSKAYIQEVVKELQKGEEGE--CPICLEAFEDAVLTP-CAHRLCRECLLSSWRTPNSGLCPVCRNAVSKQELITAPTDSRFRVDVEKNWVESSKVSALLREL---ESLRPSGS-----KSIVFSQWTAFLDLLQIPLSRNNISFVRLDGTLNQQQREKVITQFSEESDIM-----VLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKSVHIKRFIVKGTVEERMEAVQARKQRLISGAL---TDQEVRTARIEELKMLFT 1032          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A6A2Y4H6_HIBSY (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Y4H6_HIBSY)

HSP 1 Score: 435 bits (1118), Expect = 8.270e-138
Identity = 241/580 (41.55%), Postives = 362/580 (62.41%), Query Frame = 0
Query:    6 KKKASLGGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRG-DARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGS-----------SAEYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKRANK--CPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            K K + GG LI+CP +L++QW  +++ H  P  L +  HYGQ R  DA+ ++    DVV+T+YG LA+E S    N E+    +G L+ ++W RI+LDEAHTIKS  ++ + A+  + A+R WC+TGT I N + D++SLL FL V+PW +W +WN++I    E  D    +  + L++ I+  + LRR K + D HGK I+ L    V ++    +  E+DFY A+ +RSK++FD ++ Q +V+HNYAS+LELLLRLRQ CDHP+LV +     D+    D +KL +RF+  G            S  YV++V ++   G  GE  CP+CL+  +D V    C H  CR C++ S + AN   CPVCR  + R+ + T P ++RF VDL + W  S K+  LL+++   + LR +       K+++FSQ+T+ LDL+   L R N  +LR+DG++ Q QR  ++ +F ++S++      +LL+SL+AGGVG+NL AAS A +LD  WNP V+ QA  RIHR GQT+ V +KR+I+K TVEE++  VQ+RKQ +  GAL   TDE+ + A+L ELK+ F+
Sbjct:  488 KDKLADGGNLIICPMTLLSQWKVEIETHAQPGSLSLYVHYGQSRPKDAKMLAQ--NDVVITTYGVLASEFS--VENSED----NGGLYSVRWFRIVLDEAHTIKSSKSQISMATSALVADRRWCLTGTPIQNKLEDIYSLLRFLKVEPWGNWPWWNKLIQKPFEEGD----ERGLKLVQSILKPIMLRRTKCSTDRHGKPILVLPPADVQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG---DTHEYTDLNKLAKRFLRGGQNTVESEAKDLPSRAYVQEVVEELRKGEQGE--CPICLEAFEDAVLTP-CAHRLCRECLLASWRNANSGLCPVCRKTVMRQDLITAPTESRFQVDLEKNWVESTKVQALLQEL---ENLRSSGS-----KSILFSQWTAFLDLLQIPLSRHNIPFLRLDGTLNQQQREKVIKQFSEDSKIM-----VLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQRMISGAL---TDEEVRTARLEELKMFFT 1033          
BLAST of Gcaud9643.t2 vs. uniprot
Match: A0A6J0PEI4_ELAGV (DNA repair protein RAD5A isoform X3 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6J0PEI4_ELAGV)

HSP 1 Score: 427 bits (1098), Expect = 8.300e-138
Identity = 232/582 (39.86%), Postives = 368/582 (63.23%), Query Frame = 0
Query:    6 KKKASL--GGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRG-DARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRIILDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDVKPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDSHGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMHNYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSSAE-----------YVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESLKR--ANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRIRQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQAQRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWNPQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGALEVATDEDRKEAKLSELKLLFS 571
            K KA+L  GG+LIVCP +L+ QW  +++ HV P  L V  HYGQ R  DA+ ++   +DVV+T+YG LA+E S   + G      +G L+ ++W RI+LDEAHTIKS  ++ + A+  + A+R WC+TGT I N++ D++SLL FL V+PW+ W  W+++I    E  D    +  + L++ I+  + LRR K++ D  G+ I+ L    V++     S+ E+DFY A+ +RSK++FD ++ Q +V+HNYAS+LELLLRLRQ CDHP+LV +   +++     + +KL +RF++ G  A+           Y+++V ++   G  GE  CP+CL+  +D V    C H  CR C++ S +   +  CPVCR  + ++ + T P  NRF +D+ + W  S+K+  LL+++   + LR         K+++FSQ+T+ LDL+   L R N  ++R+DG++ Q QR  ++++F ++  +      +LL+SL+AGGVG+NL AAS A ++D  WNP V+ QA  RIHR GQT++V +KR+I+K TVEE++  VQ+RKQ +  GAL   TD++ + A++ ELK+LF+
Sbjct:  215 KPKATLVGGGSLIVCPMTLLGQWKAEIETHVQPGALTVYVHYGQSRPKDAKFLAQ--SDVVLTTYGVLASEFSAENAEG------NGGLYSVRWFRIVLDEAHTIKSSKSQISMAAASLTADRRWCLTGTPIQNNLEDIYSLLRFLKVEPWADWGLWHKLIQKPYEEGD----ERGLKLVQSILKPIMLRRTKSSTDRDGRPILVLPPANVEVHYCEMSAAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQE---YSNLNKLAKRFLKGGKDADGRDSSAIPSRAYIKEVVEELRKGEEGE--CPICLEAFEDAVLTP-CAHRLCRECLLASWRSTMSGLCPVCRKSMNKQDLITAPTDNRFQIDIEKNWVESSKVSVLLREL---ENLRSLG-----AKSIVFSQWTAFLDLLQIPLSRHNLTFVRLDGTLNQQQREKVINEFSEDKNIL-----VLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKNVSIKRFIVKGTVEERMEAVQARKQRLISGAL---TDQEVRTARIEELKMLFT 762          
The following BLAST results are available for this feature:
BLAST of Gcaud9643.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISR8_9FLOR0.000e+083.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA79_CHOCR7.540e-25270.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLY7_CHOCR3.840e-18368.30Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A5P1E2S7_ASPOF8.740e-14241.24Uncharacterized protein n=2 Tax=Asparagus officina... [more]
A0A6P6U1C3_COFAR3.170e-13941.55DNA repair protein RAD5A-like isoform X1 n=6 Tax=C... [more]
A0A1U8MH77_GOSHI1.140e-13840.93putative SWI/SNF-related matrix-associated actin-d... [more]
A0A7S2ZR06_9RHOD2.880e-13841.57Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
UPI001CB8BD985.760e-13841.03DNA repair protein RAD5A isoform X1 n=2 Tax=Eriger... [more]
A0A6A2Y4H6_HIBSY8.270e-13841.55SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A6J0PEI4_ELAGV8.300e-13839.86DNA repair protein RAD5A isoform X3 n=1 Tax=Elaeis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 427..515
e-value: 9.5E-16
score: 68.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 410..515
e-value: 2.8E-13
score: 50.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 390..569
score: 13.770436
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 321..359
e-value: 1.5E-4
score: 31.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 321..360
score: 11.500827
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 210..573
e-value: 1.8E-61
score: 209.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..193
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 205..570
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..194
e-value: 4.7E-36
score: 125.8
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 321..359
e-value: 1.2E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 8..570
NoneNo IPR availableCDDcd18008DEXDc_SHPRH-likecoord: 3..193
e-value: 7.81914E-62
score: 202.132
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 371..526
e-value: 1.28222E-48
score: 163.416
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 318..369
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 287..384
e-value: 1.6E-12
score: 48.9
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 10..272
e-value: 9.3E-49
score: 166.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..151
score: 13.030331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_493_length_23805_cov_4.148056contigNODE_493_length_23805_cov_4.148056:8539..10260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9643.t2Gcaud9643.t2Gracilaria caudata M_176_S67 malemRNANODE_493_length_23805_cov_4.148056 8539..10260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9643.t2 ID=Gcaud9643.t2|Name=Gcaud9643.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=574bp
MASAAKKKASLGGTLIVCPTSLVTQWINQLDQHVIPNFLRVTTHYGQGRG
DARSISLLGADVVVTSYGTLAAECSENTSNGEEIGPRDGPLFQLQWRRII
LDEAHTIKSRVTKWAKASYKIRAERHWCVTGTVIHNHVNDVFSLLHFLDV
KPWSSWAFWNRVIVSNLESNDMARQKTAMSLIRDIISSVTLRRKKTTKDS
HGKCIVQLTKKTVDLVELTPSSQERDFYSAIHQRSKLQFDTYLAQDKVMH
NYASVLELLLRLRQACDHPYLVFAAAPSKDSVVMKDRDKLFRRFMEAGSS
AEYVEKVFKDAESGAIGEAPCPLCLDIIDDPVAPKECGHPACRICMMESL
KRANKCPVCRIPITRESVATLPRKNRFSVDLSRKWRSSAKIDELLKDVRI
RQELREASKGKGIGKTVIFSQFTSMLDLVGTALDRENFRWLRIDGSVPQA
QRALILDKFEKESELSSDCSNILLVSLRAGGVGLNLVAASFAILLDIHWN
PQVDAQAQDRIHRHGQTRDVLVKRYIIKDTVEEKLLQVQSRKQSIADGAL
EVATDEDRKEAKLSELKLLFSTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR001841Znf_RING
IPR027417P-loop_NTPase
IPR038718SNF2-like_sf
IPR013083Znf_RING/FYVE/PHD
IPR000330SNF2_N
IPR014001Helicase_ATP-bd