Gcaud9641.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9641.t1
Unique NameGcaud9641.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length261
Homology
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BLAST of Gcaud9641.t1 vs. uniprot
Match: A0A2V3ISQ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ6_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 8.500e-50
Identity = 87/143 (60.84%), Postives = 111/143 (77.62%), Query Frame = 0 
Query:  120 PMVYGAPAVAPFYPX--MPYMARPMMQLGHLADLPAHEIVSPSELAVVIPAHDKLVDDPDLMYLLEKANKYSGLDGVQQSRHKYAKYTFLAGFVLAKRGLPPQSVPDDPDDVYVKLLNLYASNPTRMGPDPEVLLIRTLAKSR 260
            PM+YGA    PFY    MPY+  P MQL + + + A +++SPSELA+++P  ++   D DL+YLLEKANKY G+DG   SRHKYAKY FLAG +LAKRGLP Q++PDDP+D+YVKLL+ Y S+P+RMGPDPE LLIRTL+KSR
Sbjct:  129 PMMYGAAVPPPFYGMGPMPYV-NPAMQLANYSKMSAQDVISPSELAMLVPKQEETHMDCDLVYLLEKANKYGGVDGGHPSRHKYAKYVFLAGLLLAKRGLPQQAIPDDPEDLYVKLLHFYMSDPSRMGPDPEGLLIRTLSKSR 270
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BLAST of Gcaud9641.t1 vs. uniprot
Match: R7QBZ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBZ2_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 8.310e-13
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 0 
Query:  133 PXMPYMARPMMQLGH--LADLPAHEIVSPSELAVVIPAHDKLVDDPDLMYLLEKANKYSG-LDGVQQSRHKYAKYTFLAGFVLAKRGLPPQSVPDDPDDVYVKLLNLYASNPTRMGPDPEVLLIRTLA 257
            P MP M +P    G   + +L  +E V P +L   I        + DL  ++ KAN Y G +     S  KY KY FLAGF+L  RG P  + P DP+D+YVK+ N++ +NP R+   P   L   LA
Sbjct:  126 PPMPGMCQPPTFQGPYPMKNLNVYEYVRPIDLVSAIRYPYDAPIEKDLAKIIAKANHYGGEIHKKHFSNKKYTKYVFLAGFILYMRGYPQIANPYDPEDIYVKIRNVFIANPNRLEQAPGSALANVLA 253
The following BLAST results are available for this feature:
BLAST of Gcaud9641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISQ6_9FLOR8.500e-5060.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBZ2_CHOCR8.310e-1337.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_493_length_23805_cov_4.148056contigNODE_493_length_23805_cov_4.148056:2202..2982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9641.t1Gcaud9641.t1Gracilaria caudata M_176_S67 malemRNANODE_493_length_23805_cov_4.148056 2202..2982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9641.t1 ID=Gcaud9641.t1|Name=Gcaud9641.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=261bp
MQPYVVQDYPQPGDPYPSQPPAAPYQQPQQQQPPAASYQQPAPAAPYHPE
PAAAPESAPEPHDARPSAAAPQSPYNEPYAAEPPQPPYASYAAPYGAPPA
PAPYAPQYGAPPPMPYAPAPMVYGAPAVAPFYPPMPYMARPMMQLGHLAD
LPAHEIVSPSELAVVIPAHDKLVDDPDLMYLLEKANKYSGLDGVQQSRHK
YAKYTFLAGFVLAKRGLPPQSVPDDPDDVYVKLLNLYASNPTRMGPDPEV
LLIRTLAKSRX
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