Gcaud9593.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9593.t1
Unique NameGcaud9593.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length163
Homology
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A2V3IGB1_9FLOR (Prefoldin subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB1_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 1.680e-76
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 0
Query:    1 MKSSAGADAATPGGTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAELNASEGSSSK 162
            MKS++ A    PGGTVALGSL P+QLQKIQ+DLQRE+E+ISASL QLSNAVQRL+ASR+NA +M  ME   D+MVPITSSIYVPGKLQDTSKVLIDIGTGFFVEK+P AAK +FAKRAS+LKEEQDR TQ+HTQKRQ LEAVSAVLHRKTAEL+A+ GSSSK
Sbjct:    1 MKSNSEAGGGIPGGTVALGSLPPKQLQKIQADLQREVEIISASLVQLSNAVQRLSASRDNAERMGRMEKDTDIMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKSPEAAKAHFAKRASILKEEQDRTTQLHTQKRQQLEAVSAVLHRKTAELSAAAGSSSK 162          
BLAST of Gcaud9593.t1 vs. uniprot
Match: R7QD55_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD55_CHOCR)

HSP 1 Score: 204 bits (520), Expect = 6.850e-65
Identity = 110/153 (71.90%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MKSSAGADAATPGGTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAEL 153
            MKS A +   TPGGTVALGSL P+QL ++Q +LQRE+++ISASL+QLSNAV RLTAS+ENAAQ+A+M    +++VP+TSSIYVPG+L DT  VLIDIGTGFFVEK+P AA+ +FAKRA+LLKEE D+ATQVHTQKRQ LEAVSAVL RKTAEL
Sbjct:    1 MKSRAESAVETPGGTVALGSLPPEQLDRLQGELQREVQMISASLSQLSNAVSRLTASKENAAQIAEMSNDQEILVPLTSSIYVPGRLADTKMVLIDIGTGFFVEKSPAAAEIHFAKRATLLKEEADKATQVHTQKRQQLEAVSAVLQRKTAEL 153          
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A7S0TAF2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0TAF2_9RHOD)

HSP 1 Score: 130 bits (327), Expect = 7.360e-36
Identity = 69/140 (49.29%), Postives = 102/140 (72.86%), Query Frame = 0
Query:   12 PGGTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTA 151
            P GTV+LGSL+ +QLQ+++   Q+E+E ++ S+AQL +AV RL +SR  A + A +     V+VP+TSSI+V GK+Q  + +L+DIGTG+F E+ P  A EYFA+R + +KE+ ++A Q  +QKRQHLEA++AV  RK A
Sbjct:    3 PDGTVSLGSLSLEQLQQLKQGAQQEVEYLTQSVAQLHSAVDRLQSSRTCAKEYAAVTTETPVLVPLTSSIFVHGKVQADTDLLVDIGTGYFAERKPEVASEYFARRVTTVKEQIEKANQALSQKRQHLEAITAVYQRKVA 142          
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A5J4ZAI1_PORPP (Putative prefoldin subunit 5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAI1_PORPP)

HSP 1 Score: 122 bits (307), Expect = 1.070e-32
Identity = 66/141 (46.81%), Postives = 99/141 (70.21%), Query Frame = 0
Query:   10 ATPGGTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKT 150
            A  GG+V LGSL+ +QLQ+++   Q EIE +S SLAQL NAV RL  S+  A + A ++ G +++VP+T S+YVPG +     +L+D+GTG++ E T   A+ YFA+R   +KE+ ++ATQ+ +QKRQ +EA++ VL RKT
Sbjct:    2 AVQGGSVHLGSLSIEQLQQLRKAGQDEIEDLSQSLAQLQNAVYRLNNSKHAAGEYATLQAGNEILVPMTPSVYVPGSVIAQQNLLVDLGTGYYAEMTVQEAEAYFARRVKTVKEQIEKATQMLSQKRQQIEAITIVLQRKT 142          
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A7S0ZKK3_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKK3_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 3.630e-32
Identity = 63/138 (45.65%), Postives = 101/138 (73.19%), Query Frame = 0
Query:   14 GTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTA 151
            G+++LGSL+ +QLQ+++   Q+E+E ++ S+AQL NAV RL +SR  A + ++++    +MVP+TSSIYV G +++   +L+D+GTG+F E+TP  A EYF +R   +KE+ ++A+   +QKRQH+EAV+ VL RK A
Sbjct:    7 GSISLGSLSIEQLQQLRQAGQQELEFLNQSVAQLQNAVDRLQSSRSCAMEYSNLQQDNPLMVPLTSSIYVEGVVKNDQILLVDLGTGYFAERTPEQAAEYFKRRVVTVKEQIEKASSALSQKRQHVEAVTIVLQRKVA 144          
BLAST of Gcaud9593.t1 vs. uniprot
Match: UPI001884E100 (prefoldin subunit 5-like isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884E100)

HSP 1 Score: 97.8 bits (242), Expect = 1.050e-22
Identity = 50/148 (33.78%), Postives = 90/148 (60.81%), Query Frame = 0
Query:   15 TVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAELNASEGSSSK 162
            T+ +  L  QQL +++  L +E+ L + SL QL  A Q+   S ++  Q+   + G D++VP+T+S+YVPG+L D   VL+D+GTG+++EKT   A+EYF +R   + E+ ++   +  +K++  +A+   L  K  +L A + ++ K
Sbjct:   24 TIEIDKLNVQQLNQMRQQLDQEVGLFNDSLQQLKMAQQKFAESLDSVEQLTPEKSGKDILVPLTASMYVPGRLVDPEHVLVDVGTGYYLEKTTAGAREYFKRRIKFVTEQMEKLQTIGMEKQRLRDAIQETLEAKMHQLAAQQQAAQK 171          
BLAST of Gcaud9593.t1 vs. uniprot
Match: L8HDI9_ACACA (Prefoldin, alpha subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDI9_ACACA)

HSP 1 Score: 97.1 bits (240), Expect = 1.150e-22
Identity = 53/147 (36.05%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   10 ATPGGT----VALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAE 152
            A PGG     + + SL+ +QL  ++   + E + ++ASL +L  A QR   S+++ A +     G +V+ P+TSS+YV GKL +   V+IDIGTG+++E+TP  A+EY  ++  L++E  ++  Q    KR++LEA+  V+  K A+
Sbjct:    2 AAPGGQQGQPIPITSLSLEQLSNLKQQFEEEAQTLAASLQKLKTAGQRFLDSKDSLAALTPETNGREVLAPLTSSLYVKGKLTNVEAVMIDIGTGYYIERTPQQAQEYVDRKLGLVQENAEKLQQALLTKRKNLEAIIGVMQEKMAQ 148          
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A7S0SL79_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SL79_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 1.760e-22
Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   18 LGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKR 136
            L SL+P+QLQ +   L++++  ++ SL+ L  AV R   S      M    +G D++VP+TSS+YVPGKL D +KVLID+GTG+++E++P    +Y  ++  LLK+  ++  +V TQKR
Sbjct:    7 LASLSPEQLQNLGEQLEQDVSQLTESLSSLQKAVGRYHTSGRALEAMQKETMGKDMLVPLTSSLYVPGKLGDVTKVLIDVGTGYYLEQSPADGVDYSRRKVMLLKDNMEKLLEVITQKR 125          
BLAST of Gcaud9593.t1 vs. uniprot
Match: A0A7S3AAP7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAP7_9RHOD)

HSP 1 Score: 96.3 bits (238), Expect = 2.010e-22
Identity = 52/142 (36.62%), Postives = 86/142 (60.56%), Query Frame = 0
Query:   14 GTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAELNA 155
            GT+ L SL  +QLQ +Q   ++E          L+ A QR+ +S+  A +      G ++++P++ S+YV GKL DTS  ++D+GTG++  KT   A+EYF +RA+++K+  D+ TQ   Q+R   +AV++VL +K A   A
Sbjct:    1 GTLPLESLNIEQLQNVQKSTEQEXXXXXXXXXXLTTAQQRILSSKRLAKEFGKQPEGKEILLPLSGSVYVQGKLCDTSTAMVDLGTGYYALKTLEEAEEYFQRRAAVIKDNVDKGTQALVQRRHMYDAVTSVLQQKMAAAQA 142          
BLAST of Gcaud9593.t1 vs. uniprot
Match: K4GIZ1_CALMI (Prefoldin subunit 5 n=2 Tax=Callorhinchus milii TaxID=7868 RepID=K4GIZ1_CALMI)

HSP 1 Score: 96.3 bits (238), Expect = 2.550e-22
Identity = 52/147 (35.37%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   15 TVALGSLAPQQLQKIQSDLQREIELISASLAQLSNAVQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTGFFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKTAELNASEGSSS 161
            TV +  L  QQL+ ++S L++E E +++S+ QL     +   S+E+  ++     G DV+VP+TSS+YVPGKL D   VLID+GTG++VEKT   A+E+F ++   + ++ ++      +K    +AV+ ++H+K  ++ A   S S
Sbjct:    4 TVNVAELPLQQLEALRSQLEQETEFLTSSIQQLKMVQTKYVESKESLIKLNKDNAGKDVLVPLTSSMYVPGKLNDVEHVLIDVGTGYYVEKTVEEAREFFKRKVDFVTKQIEKIQPALQEKFTMKQAVTEMVHQKIQQIAAQNASQS 150          
The following BLAST results are available for this feature:
BLAST of Gcaud9593.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGB1_9FLOR1.680e-7679.01Prefoldin subunit 5 n=1 Tax=Gracilariopsis chorda ... [more]
R7QD55_CHOCR6.850e-6571.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0TAF2_9RHOD7.360e-3649.29Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A5J4ZAI1_PORPP1.070e-3246.81Putative prefoldin subunit 5 n=1 Tax=Porphyridium ... [more]
A0A7S0ZKK3_9RHOD3.630e-3245.65Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
UPI001884E1001.050e-2233.78prefoldin subunit 5-like isoform X1 n=2 Tax=Pollic... [more]
L8HDI9_ACACA1.150e-2236.05Prefoldin, alpha subunit n=1 Tax=Acanthamoeba cast... [more]
A0A7S0SL79_9CHLO1.760e-2241.18Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S3AAP7_9RHOD2.010e-2236.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
K4GIZ1_CALMI2.550e-2235.37Prefoldin subunit 5 n=2 Tax=Callorhinchus milii Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availablePANTHERPTHR12674:SF2PREFOLDIN SUBUNIT 5coord: 12..154
NoneNo IPR availableCDDcd00584Prefoldin_alphacoord: 23..151
e-value: 8.86383E-24
score: 88.0555
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 24..148
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 33..150
e-value: 2.4E-22
score: 79.1
IPR004127Prefoldin alpha-likeTIGRFAMTIGR00293TIGR00293coord: 24..149
e-value: 5.9E-25
score: 85.8
IPR009053PrefoldinGENE3D1.10.287.370coord: 20..156
e-value: 1.8E-30
score: 107.6
IPR011599Prefoldin alpha subunit, archaea-typePANTHERPTHR12674PREFOLDIN SUBUNIT 5coord: 12..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_749_length_18675_cov_4.529918contigNODE_749_length_18675_cov_4.529918:15642..16204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9593.t1Gcaud9593.t1Gracilaria caudata M_176_S67 malemRNANODE_749_length_18675_cov_4.529918 15642..16204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9593.t1 ID=Gcaud9593.t1|Name=Gcaud9593.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=163bp
MKSSAGADAATPGGTVALGSLAPQQLQKIQSDLQREIELISASLAQLSNA
VQRLTASRENAAQMADMEIGADVMVPITSSIYVPGKLQDTSKVLIDIGTG
FFVEKTPTAAKEYFAKRASLLKEEQDRATQVHTQKRQHLEAVSAVLHRKT
AELNASEGSSSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR009053Prefoldin
IPR011599PFD_alpha_archaea