Gcaud9588.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9588.t1
Unique NameGcaud9588.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1135
Homology
BLAST of Gcaud9588.t1 vs. uniprot
Match: A0A2V3IG84_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG84_9FLOR)

HSP 1 Score: 1407 bits (3643), Expect = 0.000e+0
Identity = 722/1142 (63.22%), Postives = 901/1142 (78.90%), Query Frame = 0
Query:    1 MGSFAHVASADYPPDVEDLIADHPAGSLSVAAVAGFAVIANAASQALLFGIAAGPELDAISIPLQPFVQNRAPALSVWLPETRSDVVQCVGLAVLSTDGVLRVFRRLSVTSSGVPTCQEIRVLASLVQSSGAEDCVALGVVYVPKAKALFVFGSRNSAAIVSLRAARLEVRPLQQGVQKDRSSLRFGSAFYSAIRSISIGIGGRDDSWMRGTGIHEIIATDYVKDFAVLVRAGGEVEKWGTRGLVWSFNVFDFIPGRDTRNRVESSGITSDGTLVVLVKSWAQTNHTRQIVCFDVRHIEIPQQVELQEPIRDIDSQADSPCFMVVSGDTAYLYLEESHILAWLSVARGVPSDGQVRGSTPIEYCANVLAFVDASHCMPDAATKGGVTACLHTGGVWVASSSVPAPVSMDITEDPRKHDSVRASETILWRAFLQFKVGQRGASKASLRGLVNSLKGFKLGDALSQVIQSTSRRIITSDQDADRDPISLLVDTDLEKKQQNHGAYLRMLADGQLFSQIRPNAPSIAEDRLWDAMNTSSRTLVLGDSEMLAAAACLRRFENSLAAVTMDGH---------ESSPLKQTSATQSITNNGGEVNDSEVLKRVFCLVRKEGGRSTSSYNNLDLTWLYRYPHEFNRFLPALYQSMKEWLSRLQKDASSLDEPEVSESVSFRAEMRRIIILSCEAAASVVQGSLDARGENCELLSNDRDDMDRIESWACDSKTSRDVLWNVAESALFYSRGTTPSENRPILDAATKVMDEYLRSSGSRFARKIYVSREPLPRNNAQKRQRTDLDIETSEWGREVRKALDKLRQYGLDDDAFRLAGKYGDYGTMLSLRVHEKDFDRFMEDSLQRFGDEFAFYAFRWLEQRGEIYRLLNGASNVSSESESTHKANRSDRLTSLLSDYLRKDRERFSNLSWMHWFSTGNFAEGIDSLLKQVSCVSVPNKEGSKASAFSLCSIAKLALHAAEKEDEN-PNQDQADSLGAMIARLFMISVQEEFSPSRDALMQGADLVRHMIEESSTDSDSLSKRVVEALRVVEVCETMGDVSATELGDYVWRRCVERQRAVWVPLAQGFSTFSDVSLREKLRSTALFKAVQESELTEGSILDIIDRGNLKSSELAESGGAEELNQMVRATVALA 1132
            M SFAHVA+ADYP  VEDL+ADHP+  +SVAAVAGFAVIAN+ SQALLFGIAAG ELDA+ IP+Q    NR PALSVWL ETR DVV+CVG+AVLS+DGVLRVFRRL V+++GVPTCQEIRVLASL QS+G + C+AL VV+V +AKALFVFGSRNSAAIVSLR ARLEVRPLQQ V  DRSSLRFGSAFYSA+R++SIGIGG+DD W  G GIH+++ +  +KD  +L R+GGEVEKWG RGLVW+FNVFD + GRD+RNR E +GITSDGTLVVLV+ WAQ +  RQIVCFDVR  E P+Q+E++EPIR I+S++DSPCFMV+SGDTAYLYLEES  LAWLSVARGV SDGQVRGSTPIEYC+ VL+FVDAS+ MPDAA+KGGVTACLH+ GVWVASSSVPAP+SMDI EDPR HDSV AS +ILWRAF+Q+K  QRGA+KASLRGL++SL GFK+ +ALSQV+Q TSR+IITS +D D+DP++LLVDT+LEKKQ NH  +LRML DG LFSQIRP+APSIAEDR+WDA+ TSS+  +L D+E LAAA CLRR ENSL  V  + H         +  P     A+ S  ++G E +D+E LK VF L+R +    ++ + N DLTWLYR+P EF+ FLPALYQ M + LS+L+ D ++  E EV E  S R E++ II+LSC+AAA++VQGSLDAR EN EL SN R+++  I++W  D K  R++LW VAE  L +SR    SE   IL AAT V+DEYLRSS S  A   Y S +     N QKR+R D D ETSEWG EVR+ALD LRQYGLDDDAFRLA KYGD+GTMLSLRV   +FD FM DSLQ+FGDEFAFYAF+WLEQ+GEI+ LL G    SS S+ +H+  RS+RL +LLS+YL++DRE+++NL+WMHWF + + + G++ LL+Q++ +S P K+GS +++ SLCSIAKLALHAAE+E+ + PNQ++   L  +IARLF+ SVQEEF    D++++G  LVR +IEESS++S++L+KRVV+ALRVVEVC+T+GD S  +LGDY+WRRCVERQ  +W+PLAQ  S  +DV LREKL STALF+A Q++++    IL++++RG+   SE   +G A+ + ++VR TVALA
Sbjct:    1 MTSFAHVANADYPAHVEDLLADHPSEPVSVAAVAGFAVIANSTSQALLFGIAAGAELDAVPIPIQALPDNRPPALSVWLSETRGDVVECVGVAVLSSDGVLRVFRRLPVSTTGVPTCQEIRVLASLNQSAGTDACIALRVVHVLRAKALFVFGSRNSAAIVSLRGARLEVRPLQQSVPSDRSSLRFGSAFYSAMRALSIGIGGKDDDWANGCGIHQLVGSVVLKDCVILTRSGGEVEKWGMRGLVWAFNVFDVVLGRDSRNRAEGAGITSDGTLVVLVRHWAQGSQARQIVCFDVRRNEPPRQIEMREPIRAIESESDSPCFMVISGDTAYLYLEESRTLAWLSVARGVSSDGQVRGSTPIEYCSKVLSFVDASYGMPDAASKGGVTACLHSAGVWVASSSVPAPISMDIAEDPRSHDSVHASLSILWRAFVQYKASQRGAAKASLRGLMHSLAGFKVQEALSQVMQRTSRKIITSVEDLDKDPMALLVDTELEKKQANHNMFLRMLGDGNLFSQIRPDAPSIAEDRIWDAITTSSKFSILTDNEKLAAAVCLRRLENSLTTVPAERHAVPRSIRNNDDEPNATPKASVSDADDGIEKHDAEFLKTVFRLLRNKRSSDSARHRNPDLTWLYRHPSEFHIFLPALYQCMAKGLSKLKIDRNTSAELEVGEGESCRRELKSIILLSCDAAATIVQGSLDAREENYELFSNGRNELTLIDNWVWDKKMCREILWKVAECTLSHSRRLPTSEKPRILRAATVVIDEYLRSSESGLASMRYAS-QGANITNGQKRRRLDADHETSEWGVEVRQALDILRQYGLDDDAFRLAEKYGDFGTMLSLRVQSIEFDSFMNDSLQKFGDEFAFYAFKWLEQKGEIHLLLRGMPGDSSGSDVSHREGRSERLKTLLSEYLQRDREQYTNLAWMHWFFSNDLSTGVEVLLRQIAVLSKPEKKGSASNSLSLCSIAKLALHAAERENLSIPNQEE--QLSIIIARLFLNSVQEEFGSEHDSILRGEALVRRIIEESSSESENLAKRVVQALRVVEVCQTIGDSSVQKLGDYIWRRCVERQSQIWIPLAQDVSGVNDVHLREKLMSTALFRAAQDADVPSSDILNVVERGSFGGSEFVAAGCADAVTRLVRTTVALA 1139          
BLAST of Gcaud9588.t1 vs. uniprot
Match: R7QIJ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIJ2_CHOCR)

HSP 1 Score: 803 bits (2074), Expect = 7.460e-271
Identity = 476/1160 (41.03%), Postives = 683/1160 (58.88%), Query Frame = 0
Query:    1 MGSFAHVASADYPPDVEDLIADHPAGSL-SVAAVAGFAVIANA-ASQALLFGIAAGPELDAISIPLQPFVQNRAPALSVWLPETRSDVVQCVGLAVLSTDGVLRVFRRLSVTSSGVPTCQEIRVLASLVQSSGAEDCV--ALGVVYVPKAKALFVFGSRNSAAIVSLRAARLEVRPLQQGVQKDRSSLRFGSAFYSAIRSISIGIGGRDDSWMRGTGIHEIIATDYV--KDFAVLVRAGGEVEKWGTRGLVWSFNVFDFIPGRDTRNRVESSGITSDGTLVVLVKSWAQTNHTRQIVCFDVRHIE-IPQQVELQEPIRDIDSQADSPCFMVVSGDTAYLYLEESHILAWLSVARGVPSDGQVRGSTPIEYCANVLAFVDASHCMPDAATKGGVTACLHTGGVWVASSSVPAPVSMDITEDPRKHDSVRASETILWRAFLQFKVGQRGASKASLRGLVNSLK--GFKLGDALSQVIQSTSRRIITSDQDADRDPISLLVDTDLEKKQQNHGAYLRMLADGQLFSQIRPNAPSIAEDRLWDAMNTSSRTLVLGDSEMLAAAACLRRFEN---------------SLAAVTMDGHESSPLKQTSATQSITNNGGEVNDSEVLKRVFCLVRKEGGRSTSS-YNNLDLTWLYRYPHEFNRFLPALYQSMKEWLSRLQKDASSLDEPEVSESVSFRAEMRRIIILSCEAAASVVQGSLDARGENCELLSNDRDDMDRIESWACDSKTSRDVLWNVAESALFYSRGTTPSENRPILDAATKVMDEYLRSSGSRFARKIYVSREPLPR---NNAQKRQRTDLDIETSEWGREVRKALDKLRQYGLDDDAFRLAGKYGDYGTMLSLRVHEKDFDRFMEDSLQRFGDEFAFYAFRWLEQRGEIYRLLNGASNVSSESESTHKANRSDRLTSLLSDYLRKDRERFSNLSWMHWFSTGNFAEGIDSLLKQVSCVSVPNKEGSKASAFSLCSIAKLALHAAEKEDENPNQDQADSLGAMIARLFMISVQEEFSPSRDALMQGADLVRHMIEESSTDSDSLSKRVVEALRVVEVCETMGDVSATELGDYVWRRCVERQRAVWVPLAQGFSTFSDVSLREKLRSTALFKAVQESELTEGSILDIIDRGNLKSSELAESGGAEELNQMVRATVALA 1132
            M + A  A  D+P +VEDL++  P+ S  S +AVAG+AVIA+A +S AL+F IA G  LD++SIPLQ       P+L+ W    R+D +  V +A L+ DG LRV+  + V S   P  +++R L S + SS ++D    AL V        L++FG R SAAIV  R  RLEV PL +    D  S+RFG+ FYSAI+SI    GGRDD W  G+G H+I+A      +   ++VR  G+VE+WG  G +WSF+VFDF  GRD+R  V S+G+T+  T V+LV+S ++     +IVCFDVR    IP++ E+  P+ D     DS C MVVSGD AY Y+E    +AWLSVARG+PS+GQV+GST ++    VL+ VDAS+ +P+++  GG+ A +H+GGVW+ SSSVPAP+S+D         SV A+   LWR+ LQ+   Q+GA+KASLRGLV SL+  GF + ++LS ++   SR+II SD D +  P++LL+DT+LEKK   H  +L  LAD ++FS IRP++PS+ EDR+WDA+   SR  V+ D E LAAA  +R  EN               S A +  +   S  L +T    ++ N        +VLK    L   +    T     +   T LYRYP+EF+RFLPAL + M E +SR+Q +     +       ++R      ++LSCEAA   VQG+ +AR E  EL       MD I +W  DS+T  + L  +A+ AL     +  S+   +++AA  V+DE L S      R    S+E   R   +  QKR+RTDL  E +  G+EVR ALD LR  G+ D+AF LA KYGDYGTML+L++   DFD+FME+ L++FG+EF  ++F+WLE RG I+ LL G  +  S  ++     RS+RL +LLS+Y   +R R SNLSW+H+ S G++      L+ Q   V+VP KEGS  +   L SIAKLAL       ++   + A +   +  +L   ++Q E  P+   L     ++R +++ S+T+S+ LS +V  A+  ++  +     +   L DYVW  CVERQR +WV L +G  T +D+  R+ LRSTAL++A     L E +I ++I RG   + E A+ G   E+ +++RATV+LA
Sbjct:    1 MAASARFAETDFPAEVEDLMSSLPSDSAPSCSAVAGYAVIASANSSHALVFAIAVGSALDSVSIPLQSHQDPHPPSLATWTLSQRTDTLTSVAVAALTRDGTLRVYNSVDVRSRSRPRAEQVR-LGSALASSVSDDSAPPALNVCRSTDGS-LYIFGGRGSAAIVRDRGGRLEVHPLPRSSDADTGSIRFGAMFYSAIKSIGAVAGGRDDDWENGSGPHQIVACSPTTGQPGVIIVRRAGDVERWGPEGRLWSFSVFDFEGGRDSRRSVLSAGMTTHDTAVLLVQSRSEAGMGHKIVCFDVRSSNSIPRRTEMVVPLNDDHVDPDSQCLMVVSGDIAYFYVEGKKTMAWLSVARGIPSEGQVQGSTTVDSDLKVLSMVDASYGLPESSATGGIAAFIHSGGVWLVSSSVPAPISLDEDVPLAGLASVSAAVPDLWRSLLQYSADQKGAAKASLRGLVKSLRAEGFDVSESLSALVLLISRKIIVSDHDPESAPLTLLIDTELEKKSGQHRIFLTFLADSEIFSGIRPDSPSVTEDRIWDAITVQSRFEVITDGEKLAAARRVRDLENRHAAGGYCYRFNDATSRAGIGSERAVSDILSRT-RRDNVENEETITYGQDVLKSALLLGGTQASEQTKDGLQDEAATRLYRYPYEFHRFLPALERCMSESISRMQTEQDMAGDTTAGSWKAYRRAAETTVLLSCEAAIETVQGAKEARAEADELFEAMPTGMDGIGNWMSDSRTCGNTLMKIAQKALLIGARSRQSDESLVMNAAVFVVDELL-SRTLEHGRWNDRSKEQGRRWGESKPQKRRRTDLVFENTARGKEVRSALDMLRNSGMGDEAFLLAEKYGDYGTMLALKISSPDFDKFMEEGLEKFGEEFGLFSFQWLEDRGHIHLLLQGCGSQQSVRDAHFS--RSERLNTLLSEYFATERGRLSNLSWIHYISQGDYGAASSCLVSQTQRVAVPGKEGSAINTAVLSSIAKLALKVTAGGVQDRFSETASNFDYISGKLLHTNLQAELEPNAGTLRPCDVVIRELMDNSATESERLSDQVAMAIEALQYSDVASSDAQKTL-DYVWYSCVERQRDLWVLLVKGLGTANDMETRKTLRSTALYRAAVRIGLRESAIAEVISRGAFDNGEFAKLGCLPEVARLMRATVSLA 1153          
BLAST of Gcaud9588.t1 vs. uniprot
Match: A0A7S3A640_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A640_9RHOD)

HSP 1 Score: 102 bits (253), Expect = 2.120e-18
Identity = 130/489 (26.58%), Postives = 195/489 (39.88%), Query Frame = 0
Query:  133 EDCVALGVVYVPKAKALFVFGSRNSAAIVSLRAARLEVRPLQQGVQKDRSSLR-FGSAFYSAIRSISIGIGGRDDSWMRGTGIHEIIATDYVKDFAVLVRAGGEVEKWGTRGL---------VWSFNV--FDFIPGRDTRN----RVESSGITSDGTLVVLVK-SWAQTNHTRQIVCFDVRHIE--IPQQVELQEPIRDIDSQ-ADSPCFMVVSGDTAYLYLEESHILAWLSVARGVPSDGQVRGSTPIEYCANVLAFVDASHCMPDAA---TKGGVTACLHTGGVWVASSSVPAPVSMDITEDPRKH------------------DSVRASETI-----------------LWRAFLQFKVGQRGASKASLRGLVNSLK---GFKLGDALSQVIQSTSRRIITS-DQDADRDPISLLVDTDLEKKQQNHGAYLRMLADGQLFSQIRPNAPSIAEDRLWDAMNTSSRTLVLGDSEMLAAAACLRRFENS 559
            +DC ++  V    +  L VF S      V + +  L+   +      + ++ R + S F SA +S S+G                I A++  +D A  VRA G+V+ W  R L          W+  +  ++ I G D        V S     +G +  LV  S A +     IV   V      +   VELQ   +D D   A     +VVS   AY+      + A++S++ GV    Q+ G         VL   +   C+ DA     +GG  A L      +A + VPAP    + +  R                    DS    +T                  +WRAFLQ+   Q GA++ +L  L    +   G    DA S  I  TS RI+    +D D  P SLLV+  L +KQ  H   L ML D ++              RLWD ++ SSR++V+G++  L+AA  +R  ENS
Sbjct:   97 QDCESVERVCTLGSDTLVVFESGGGCGTVQISSMGLKWERIASSSGSEGTAGRIYSSIFTSAPKSSSLG--------------PIIYASEASEDMAFFVRASGDVQLWKVRELSXXXXXXXXXWNVAMAAWEIIAGNDRSTDIYYEVVSCKAVGNGRMCSLVAYSTAGSPARLYIVTNRVTSSSPAVEHAVELQTWGKDDDVHGALESVELVVSSGVAYVVFGGEGVAAFVSISEGVQEADQICGEVSF-----VLPDGEEIACVLDAYGDDLQGGAVAILFRERYTIACAGVPAPSIASLPKSTRSSRKXXKGVENVDSSLASASDSTTGRKTTQKSLSTKSESHLNAVDTVWRAFLQYANNQTGATRVTLEPLAADFEARGGAASADA-SSAIAGTSNRIVNGGSRDEDLAPYSLLVNHTLSEKQTKHAKLLNMLGDERVMKM-----------RLWDILDQSSRSIVVGNAGRLSAAVMIRTLENS 554          
The following BLAST results are available for this feature:
BLAST of Gcaud9588.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IG84_9FLOR0.000e+063.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIJ2_CHOCR7.460e-27141.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A640_9RHOD2.120e-1826.58Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037624Nuclear pore complex protein Nup133-likePANTHERPTHR13405NUCLEAR PORE COMPLEX PROTEIN NUP133coord: 268..1104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_749_length_18675_cov_4.529918contigNODE_749_length_18675_cov_4.529918:4613..8017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9588.t1Gcaud9588.t1Gracilaria caudata M_176_S67 malemRNANODE_749_length_18675_cov_4.529918 4613..8017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9588.t1 ID=Gcaud9588.t1|Name=Gcaud9588.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1135bp
MGSFAHVASADYPPDVEDLIADHPAGSLSVAAVAGFAVIANAASQALLFG
IAAGPELDAISIPLQPFVQNRAPALSVWLPETRSDVVQCVGLAVLSTDGV
LRVFRRLSVTSSGVPTCQEIRVLASLVQSSGAEDCVALGVVYVPKAKALF
VFGSRNSAAIVSLRAARLEVRPLQQGVQKDRSSLRFGSAFYSAIRSISIG
IGGRDDSWMRGTGIHEIIATDYVKDFAVLVRAGGEVEKWGTRGLVWSFNV
FDFIPGRDTRNRVESSGITSDGTLVVLVKSWAQTNHTRQIVCFDVRHIEI
PQQVELQEPIRDIDSQADSPCFMVVSGDTAYLYLEESHILAWLSVARGVP
SDGQVRGSTPIEYCANVLAFVDASHCMPDAATKGGVTACLHTGGVWVASS
SVPAPVSMDITEDPRKHDSVRASETILWRAFLQFKVGQRGASKASLRGLV
NSLKGFKLGDALSQVIQSTSRRIITSDQDADRDPISLLVDTDLEKKQQNH
GAYLRMLADGQLFSQIRPNAPSIAEDRLWDAMNTSSRTLVLGDSEMLAAA
ACLRRFENSLAAVTMDGHESSPLKQTSATQSITNNGGEVNDSEVLKRVFC
LVRKEGGRSTSSYNNLDLTWLYRYPHEFNRFLPALYQSMKEWLSRLQKDA
SSLDEPEVSESVSFRAEMRRIIILSCEAAASVVQGSLDARGENCELLSND
RDDMDRIESWACDSKTSRDVLWNVAESALFYSRGTTPSENRPILDAATKV
MDEYLRSSGSRFARKIYVSREPLPRNNAQKRQRTDLDIETSEWGREVRKA
LDKLRQYGLDDDAFRLAGKYGDYGTMLSLRVHEKDFDRFMEDSLQRFGDE
FAFYAFRWLEQRGEIYRLLNGASNVSSESESTHKANRSDRLTSLLSDYLR
KDRERFSNLSWMHWFSTGNFAEGIDSLLKQVSCVSVPNKEGSKASAFSLC
SIAKLALHAAEKEDENPNQDQADSLGAMIARLFMISVQEEFSPSRDALMQ
GADLVRHMIEESSTDSDSLSKRVVEALRVVEVCETMGDVSATELGDYVWR
RCVERQRAVWVPLAQGFSTFSDVSLREKLRSTALFKAVQESELTEGSILD
IIDRGNLKSSELAESGGAEELNQMVRATVALARS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037624Nup133-like