Gcaud9566.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9566.t1
Unique NameGcaud9566.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length242
Homology
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BLAST of Gcaud9566.t1 vs. uniprot
Match: A0A2V3J6W9_9FLOR (BAH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W9_9FLOR)

HSP 1 Score: 427 bits (1097), Expect = 2.900e-150
Identity = 200/241 (82.99%), Postives = 216/241 (89.63%), Query Frame = 0 
Query:    1 MVNRKRTISELRTTEVVTSEPVLVGEGKWSPRHKHYVYPAVDYQGTRFRIGDHVAMYTGDKSDGREWICVLETLYKDPEDGCAKFKGRWFWSVQDVKEHKKEDSEDMRPSKCESNELICCDNRDTNLVESISRKACILSFDNFALVRRTVLKNDSPWKRIYFCERQFYHKAHRFSELNSILFPGDPIPNDLRKAAGLPPQEHTELESEVDYDNAYHEPELTARTKRKTRNEKLTSEPILLW 241
            MVNRKRTISE+R TEVVT+EPVLVG GKWSP+HK  VYPAVDY G RFRIGDHVAMYTGDK DGREW+CVLETL+KD ED  AKFKGRWFWS+QDVKEHK+ED E+MR SKCES+ELICCDNRDTNLVESISRKA ILS+DNF LV+R VLKNDSPWKR YFCERQFYHKAHRFSELNSILFPGDPIP DLRKAAGL PQE TELESEVDYD+AYHEPE + R+ RK RNE L+ EP+LLW
Sbjct:    1 MVNRKRTISEMRQTEVVTAEPVLVGAGKWSPKHKALVYPAVDYLGMRFRIGDHVAMYTGDKGDGREWVCVLETLFKDREDDTAKFKGRWFWSIQDVKEHKREDGEEMRASKCESHELICCDNRDTNLVESISRKAHILSYDNFQLVKRVVLKNDSPWKRTYFCERQFYHKAHRFSELNSILFPGDPIPKDLRKAAGLSPQEDTELESEVDYDDAYHEPEYSVRSNRKPRNENLSGEPVLLW 241
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BLAST of Gcaud9566.t1 vs. uniprot
Match: R7Q0W8_CHOCR (BAH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0W8_CHOCR)

HSP 1 Score: 281 bits (720), Expect = 8.840e-93
Identity = 139/251 (55.38%), Postives = 184/251 (73.31%), Query Frame = 0 
Query:    1 MVNRKRTISE--LRTTEVVTSEPVLVGEGKWSPRHKHYVYPAVDYQGTRFRIGDHVAMYTGDKSDGREWICVLETLYKDPEDGCAKFKGRWFWSVQDVKEHKKEDSEDMRPSKCESNELICCDNRDTNLVESISRKACILSFDNFALVRRTVLKNDSPWKRIYFCERQFYHKAHRFSELNSILFPGDPIPNDLRKAAGLPPQEHTELESE--VDYDNAYHEPELTARTKRK------TRNEKLTSEPILLW 241
            MVNRKR +SE      E+VT+EPVLV    ++ + +  ++ AVDY GTRFR+GDHVAMY+    +G+EW+CV+E L+++P+ G  KFKGRWFWSVQD+  HK + +E MRPSKCES+E++CCDNRDTNLVESI+RK  +LS +NF LV++ V K  S W ++YFCERQ+YH+AHRFSELN++LFPGDPIP +LR AAGLP    T LE +  V Y+N Y EPEL    KRK       ++E + ++P L+W
Sbjct:    1 MVNRKRHLSEDPHLAPEIVTTEPVLVPPACYNTKLQLDLFQAVDYLGTRFRVGDHVAMYS---DEGKEWVCVIEQLFEEPKSGKPKFKGRWFWSVQDIILHKDDMAEVMRPSKCESHEILCCDNRDTNLVESITRKCQVLSNENFQLVKKVVTKLGSRWSKVYFCERQYYHRAHRFSELNAMLFPGDPIPRELRAAAGLPEVAPTMLEYQENVAYENGYSEPELHPHAKRKGITVESEKDETVNADPFLIW 248
The following BLAST results are available for this feature:
BLAST of Gcaud9566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6W9_9FLOR2.900e-15082.99BAH domain-containing protein n=1 Tax=Gracilariops... [more]
R7Q0W8_CHOCR8.840e-9355.38BAH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043151Bromo adjacent homology (BAH) domain superfamilyGENE3D2.30.30.490coord: 31..238
e-value: 1.3E-20
score: 75.9
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 46..178
score: 12.625347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_388_length_27163_cov_4.403295contigNODE_388_length_27163_cov_4.403295:23003..23728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9566.t1Gcaud9566.t1Gracilaria caudata M_176_S67 malemRNANODE_388_length_27163_cov_4.403295 23003..23728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9566.t1 ID=Gcaud9566.t1|Name=Gcaud9566.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=242bp
MVNRKRTISELRTTEVVTSEPVLVGEGKWSPRHKHYVYPAVDYQGTRFRI
GDHVAMYTGDKSDGREWICVLETLYKDPEDGCAKFKGRWFWSVQDVKEHK
KEDSEDMRPSKCESNELICCDNRDTNLVESISRKACILSFDNFALVRRTV
LKNDSPWKRIYFCERQFYHKAHRFSELNSILFPGDPIPNDLRKAAGLPPQ
EHTELESEVDYDNAYHEPELTARTKRKTRNEKLTSEPILLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043151BAH_sf
IPR001025BAH_dom