Gcaud9561.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9561.t1
Unique NameGcaud9561.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length182
Homology
BLAST of Gcaud9561.t1 vs. uniprot
Match: A0A2V3J618_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J618_9FLOR)

HSP 1 Score: 213 bits (543), Expect = 2.420e-68
Identity = 103/138 (74.64%), Postives = 122/138 (88.41%), Query Frame = 0
Query:   43 EVIKNRVNAETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTEGVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFANKIINEFVEWTVAEIDERMGTSLQQSRDAAG 180
            EVIKNR+NAETDIPFLRESTE  +I ++IETLNPHIEP+LR+ICP PYVDCIKIALTEG+P EERR +IS ILR+QL  PLA +LNGKLD++L+PES+E ++L VFA KI++EFVEWTVAEIDERMG SL  SR+AAG
Sbjct:    8 EVIKNRINAETDIPFLRESTEDRVIKSVIETLNPHIEPALRQICPTPYVDCIKIALTEGIPTEERRLQISAILREQLVDPLADQLNGKLDMALIPESMELRVLEVFAKKIVDEFVEWTVAEIDERMGISLSASREAAG 145          
BLAST of Gcaud9561.t1 vs. uniprot
Match: D7G7I4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7I4_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 2.610e-30
Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   44 VIKNRVNAETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTEGVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFANKIINEFVEWTVAEIDERM 168
            V+  +VN + DIP L ES E  +I+  ++ + P +EPS++ I P  YV CIK AL E   I+ RR+ IS +LR +L+ PL  +LN ++D S +PE  E K+L + +NK+I+EFVEWTV E+DER+
Sbjct:    9 VMVRKVNDDLDIPLLSESRERRLIEKFVDKIMPKVEPSMQAIMPDVYVRCIKKALDETETIKNRRKHISTLLRGELSEPLTRQLNERVDCSGIPEKWEGKVLKLVSNKVIDEFVEWTVGEVDERL 133          
BLAST of Gcaud9561.t1 vs. uniprot
Match: A0A6H5JSA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.290e-22
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   49 VNAETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTEGVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFANKIINEFV 157
            VN + DIP + E  E  II+  ++   P +EPSL  + P  Y+D +K+AL E +   ER+ER+S +LR +LA PL+ +LN ++D S +PES+E K+L V A K++NE V
Sbjct:   14 VNVDFDIPLISEGRERGIIEKFVDQAVPAMEPSLSALMPPAYMDLVKVALDETLTAAERKERMSELLRGELAVPLSKQLNERVDCSYIPESMEGKVLKVVAEKMVNEIV 122          
BLAST of Gcaud9561.t1 vs. uniprot
Match: A0A7S4G473_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G473_9EUGL)

HSP 1 Score: 87.8 bits (216), Expect = 6.650e-19
Identity = 46/124 (37.10%), Postives = 79/124 (63.71%), Query Frame = 0
Query:   38 SISRFEVIKNRVNAETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTEGVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFANKIINEFVEWTV 161
            S+S+ + +  +VN   +IPF+ ES+E+++I   ++TLN  +EPSL  I P  YV+ IK+ L E +   E+   IS + ++ L  PLA+ LN ++D+ ++PES+E+  L     ++I+E VE T+
Sbjct:   11 SVSQVDRVVAKVNNSMNIPFMSESSEASLIRQAVDTLNGAMEPSLLAIMPPDYVEIIKLCLNEKLSANEKLPLISALFKKNLRDPLAAALNERVDIPVLPESMEEWFLEKAVEEMIDEGVEHTL 134          
BLAST of Gcaud9561.t1 vs. uniprot
Match: A0A7S4V537_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V537_9DINO)

HSP 1 Score: 54.7 bits (130), Expect = 9.250e-6
Identity = 31/129 (24.03%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   38 SISRFEVIKNRVNAETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTEGVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFANKIINEFVEWTVAEIDE 166
            S  +  ++ +R+N   ++  L ES E ++I+  +  +N  ++  L  I    +   ++  L E  P + +   +  +L +QL  PL   LNG++D+ L+ E +E+++LT   +K+++  V  +V  +++
Sbjct:  109 SEKQVNIVIDRINESINLWALTESMERSLIEPPVLQVNGMLKDCLGGIMGDDWKLALETLLDESKPPDVKIPIVQDVLGRQLRDPLVQALNGRIDLPLIGEGLEEQLLTTVVDKVLDSIVSSSVLGMEQ 237          
The following BLAST results are available for this feature:
BLAST of Gcaud9561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J618_9FLOR2.420e-6874.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
D7G7I4_ECTSI2.610e-3046.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JSA3_9PHAE2.290e-2244.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4G473_9EUGL6.650e-1937.10Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4V537_9DINO9.250e-624.03Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_388_length_27163_cov_4.403295contigNODE_388_length_27163_cov_4.403295:9779..10568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9561.t1Gcaud9561.t1Gracilaria caudata M_176_S67 malemRNANODE_388_length_27163_cov_4.403295 9779..10568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9561.t1 ID=Gcaud9561.t1|Name=Gcaud9561.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=182bp
MTHTVAHVAALFSVASRVVSCAVVCAPLRSTLCALRSSISRFEVIKNRVN
AETDIPFLRESTESTIIDTIIETLNPHIEPSLREICPAPYVDCIKIALTE
GVPIEERRERISIILRQQLARPLASRLNGKLDVSLVPESVEQKILTVFAN
KIINEFVEWTVAEIDERMGTSLQQSRDAAGI*
back to top