Gcaud9503.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9503.t1
Unique NameGcaud9503.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length134
Homology
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BLAST of Gcaud9503.t1 vs. uniprot
Match: R7QFN6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 183 bits (464), Expect = 2.440e-57
Identity = 88/133 (66.17%), Postives = 109/133 (81.95%), Query Frame = 0 
Query:    1 MEGKLSIWIKSGSFNHYRDLYIQVLVDDNDIWRTDDKDGFSPNWDSTVVKHVKGDYEKIILRLMDEDTCTRDDVIATAEFPIADLLDDGINDDEIPMCDADGNQIGTLAVNINFEEGDVNLFQLFGSMLHKGE 133
            MEGKLSIWIK GSF+H  DLY++VL+DD ++W+TD+KDG SP+WDSTVVKH+KG+YEKIIL+LMDEDT +RDDVI T EFPI D +  GIN     + DA+ N +GT+ VNINFEEGDV++F L GSMLHK +
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GING-SFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHKDD 131
The following BLAST results are available for this feature:
BLAST of Gcaud9503.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QFN6_CHOCR2.440e-5766.17C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 17..93
e-value: 5.2E-9
score: 36.3
IPR000008C2 domainPROSITEPS50004C2coord: 1..95
score: 9.214403
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 5..116
e-value: 6.9E-10
score: 41.4
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 3..114
NoneNo IPR availableCDDcd00030C2coord: 9..94
e-value: 1.8639E-7
score: 44.3651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_69_length_56878_cov_4.412084contigNODE_69_length_56878_cov_4.412084:15675..16437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9503.t1Gcaud9503.t1Gracilaria caudata M_176_S67 malemRNANODE_69_length_56878_cov_4.412084 15675..16437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9503.t1 ID=Gcaud9503.t1|Name=Gcaud9503.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=134bp
MEGKLSIWIKSGSFNHYRDLYIQVLVDDNDIWRTDDKDGFSPNWDSTVVK
HVKGDYEKIILRLMDEDTCTRDDVIATAEFPIADLLDDGINDDEIPMCDA
DGNQIGTLAVNINFEEGDVNLFQLFGSMLHKGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf