Gcaud9500.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9500.t1
Unique NameGcaud9500.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length178
Homology
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BLAST of Gcaud9500.t1 vs. uniprot
Match: A0A2V3IWB4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWB4_9FLOR)

HSP 1 Score: 144 bits (363), Expect = 7.630e-41
Identity = 78/161 (48.45%), Postives = 113/161 (70.19%), Query Frame = 0 
Query:    9 MESDLTALELRLHRLETLVGEPRS-DVNLLKELKAVGKELRENVPDEMTAAFKTVALLSSVGMLPATRAARMEKLSHLERTMEQAEEYVVEFDALQHVLDKPLDVDQLNREALATFESRICSVSRDVTEEERNVDALLMEFNGVTERLNDAIMHMAHVLQS 168
            M+SDL AL+ R+ RLE L+G   S +  LLK ++A  K++ + VPDEM AA+K VALL SV  LPA+RA R +KL  ++  + +AE YV +  ALQ+VLD+ +++  L+R+AL   E  +C ++  +TEEE+ VDALL++FN VTERLN AI+ MA  L++
Sbjct:    1 MDSDLMALKQRICRLERLIGNCSSTNTKLLKGMQAAQKDVHKLVPDEMAAAYKAVALLCSVATLPASRAGRADKLKRVDSALGRAEPYVEQLFALQNVLDRGIELKDLDRDALGRVEVGVCDIASKMTEEEQKVDALLVQFNEVTERLNSAILSMAQALRN 161
The following BLAST results are available for this feature:
BLAST of Gcaud9500.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IWB4_9FLOR7.630e-4148.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_69_length_56878_cov_4.412084contigNODE_69_length_56878_cov_4.412084:8901..9434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9500.t1Gcaud9500.t1Gracilaria caudata M_176_S67 malemRNANODE_69_length_56878_cov_4.412084 8901..9434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9500.t1 ID=Gcaud9500.t1|Name=Gcaud9500.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=178bp
MNSEGKRRMESDLTALELRLHRLETLVGEPRSDVNLLKELKAVGKELREN
VPDEMTAAFKTVALLSSVGMLPATRAARMEKLSHLERTMEQAEEYVVEFD
ALQHVLDKPLDVDQLNREALATFESRICSVSRDVTEEERNVDALLMEFNG
VTERLNDAIMHMAHVLQSRTSSNNEKP*
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