Gcaud9491.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9491.t1
Unique NameGcaud9491.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length179
Homology
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A2V3J2E8_9FLOR (Beta-carotene isomerase D27, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2E8_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 1.210e-70
Identity = 115/176 (65.34%), Postives = 132/176 (75.00%), Query Frame = 0
Query:    1 MFVTAFCSCTPAVKLSSRPSRTFTSRSRNLSLPSASTKESLSARGPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAEDGVTVEIERCRYLE 176
            M V  FCSC P  K +   S       +  S     T+ SL+ RGP+TPAPDYS IDS+  NK+FT IF SKLE+ELG+ S ERGYAGVI  VK+LA +HR DP A+Q AS+RVLMSLFP WLP+AF+ MFSKP P FAAWINAVVT+GVTQWLMGPSKLA+DG TVEIERCRYLE
Sbjct:    1 MHVLTFCSCVPIAKQNFTQSLNLRKTCQKRSAIPIVTRASLAERGPQTPAPDYSAIDSNLFNKVFTGIFLSKLESELGKTSTERGYAGVISVVKRLAEKHRVDPLAMQEASERVLMSLFPSWLPQAFTWMFSKPFPRFAAWINAVVTIGVTQWLMGPSKLADDGHTVEIERCRYLE 176          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A6T5VXJ1_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5VXJ1_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 7.950e-34
Identity = 64/138 (46.38%), Postives = 91/138 (65.94%), Query Frame = 0
Query:   39 ESLSARGPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAEDGVTVEIERCRYLE 176
            ES   R  R  A  Y++ID+S LN +F   F  ++  ELG   +  GYA V++  ++L A+ R   E +  AS+R+L SLFP W P AF  +F++P+P F+  +NA+VTV  TQWLMGPS L +DG+TV++ERCR+LE
Sbjct:   59 ESEEERVARELAEVYARIDASALNAVFMRTFARQMAAELGAPPSAEGYAAVVELARRLVAKLRTGEE-ISAASRRILDSLFPAWFPAAFKALFARPLPRFSLRMNALVTVAATQWLMGPSALEDDGLTVKVERCRFLE 195          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 3.360e-31
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   45 GPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAE---------DGVTVEIERCRYLE 176
            GP  P PDY+ IDS PLN++   +FR K+   +G  S   GY  +ID  ++L A +  +   +QL ++++L SLFP WLP AF+ MFSKP+P F+  +NA+ T    QWLMGP K+ +          G+ V +ERCRYLE
Sbjct:    3 GPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQLSGYEAIIDLTRRLNASY-SEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLE 142          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 8.480e-31
Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = 0
Query:   45 GPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAE---------DGVTVEIERCRYLE 176
            GP TPAP Y++ID+ PLN++   +FR K+   +G  S  +GY  +ID  ++L  +++   +  QLA++R+L SLFP WLP AF  MFS P+P+F+  +NA+ T    QWLMGP K+ +          G+ V +ERCRYLE
Sbjct:   66 GPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQLQGYPAIIDLTRRLNRQYQTARDT-QLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLE 205          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A5J4YGW2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGW2_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 5.940e-27
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   45 GPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAEDGVTVEIERCRYLE 176
            GP    P Y+ ID+ P NK    +FR K+   L   +  +GY  +ID  ++L +++ K P+  Q A++++L SLFP WLP AFS MFS+P+P  A  +NA VT    QWLMGP K+ +  +     RCRYLE
Sbjct:   77 GPPEAPPSYTSIDALPWNKAIMALFRRKMVVALAEDTEAQGYDAIIDLTRKLNSKY-KHPKQTQEATKKILKSLFPGWLPGAFSAMFSRPVPQLACQLNAWVTALTCQWLMGPCKINDLELADGTVRCRYLE 207          
BLAST of Gcaud9491.t1 vs. uniprot
Match: E1ZG85_CHLVA (D27-like_C domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZG85_CHLVA)

HSP 1 Score: 107 bits (267), Expect = 2.210e-25
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 0
Query:   39 ESLSARGPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAE---------DGVTVEIERCRYLE 176
            + L+A GP +P PDYS ID+ PLN+   ++FR ++   +G  S + GYA +ID  ++L A+H   P   Q A+  +L SLFP WLP AF+ MFSKP+P  +            QWLMG  ++ +          G  V ++RCRYLE
Sbjct:   27 DGLAAAGPASPPPDYSAIDTQPLNRAVYSLFRGRMVQAIGSDSQQEGYAAIIDLTRRLNAQH-SSPRGTQEATVGILRSLFPGWLPPAFAVMFSKPMPGLSC-----------QWLMGECEVNDVEIDGGRMGAGHGVLVKRCRYLE 161          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A7S1XFH2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFH2_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 1.700e-20
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 0
Query:   42 SARGPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAER---------------GYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAEDGVTVEIERCRYLE 176
            S+ GP  PAP+Y  +D +  +K+    F + LE E     A                 G++ + D V  L   +  D   L  AS RVL  LFP W  +AF ++F++P+P ++A + A ++   T+WLMG S +  DGVT+ +ERCR+LE
Sbjct:   55 SSVGPEGPAPNYQAVDRNIFSKVLMGAFGASLERECATSWAPEASTVSELRFEDQGSSGFSRIRDLVWDLKRMYAGDGAGLSDASHRVLQGLFPGWFLKAFVQLFAQPLPEWSARLVAGMSAATTRWLMGASAVDPDGVTLVVERCRFLE 204          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A7S3E515_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E515_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 4.490e-19
Identity = 53/129 (41.09%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   68 IFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKL---------AEDGVT---------VEIERCRYLEGS 178
            +FR K+   +G  S   GY G+++  K L  R +   E ++  S+RVL+SLFP WLP AF  MF++P P F+  +NAVVT    QWLMG + L         A+DG           V++ERCRYLE S
Sbjct:    2 LFRRKVVENVGFDSPLEGYPGLMEVTKVLNTRFKTSDE-VKAVSKRVLVSLFPSWLPPAFRAMFARPFPEFSLAMNAVVTALACQWLMGRTTLNEVEVVDERAKDGEGGAGTRLVPGVKVERCRYLEES 129          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A7S1H0J2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H0J2_HEMAN)

HSP 1 Score: 92.0 bits (227), Expect = 5.180e-19
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   39 ESLSARGPRTPAPDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAE-----------DGVT--VEIERCRYLEGS 178
            E   + GP TP P Y   D+S  ++    +FR  +   LG    E G++G++     L    R  P   Q  +QR+L SLFPP++ + F  MFS P P+F+A +NA++T     WLMGP +L +           DGV   + IERCRYLE S
Sbjct:   93 EEYRSAGPDTPRPIYD--DTSLFDRTAIGVFRQGMAKSLGGDVQEEGFSGLMQLA--LLLNRRYGPTETQQRTQRILASLFPPFILKLFPIMFSGPFPAFSAKLNALITSKTCVWLMGPQELFDIDRQEMQQGWGDGVNQGILIERCRYLEES 241          
BLAST of Gcaud9491.t1 vs. uniprot
Match: A0A1Z5JQF0_FISSO (D27-like_C domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQF0_FISSO)

HSP 1 Score: 90.1 bits (222), Expect = 1.210e-18
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 0
Query:   46 PRTPAPDYSKIDSSPLNK----LFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARHRKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGVTQWLMGPSKLAEDGVTVE-----------IERCRYLE 176
            P    PDY  I   PL +    LF ++FR KLE  +G  + E GYA +ID   +L AR+  D E ++  +Q+ L  LFP WLP +++ +FSKP P F+A +NA  T     WLMG  ++ +  +T +           ++RCR+LE
Sbjct:   42 PMETKPDYDAI-VGPLGRAVDNLFLDLFRQKLEENVGFQTNETGYAAIIDLTSKLNARY-SDREEIRRRAQKTLSDLFPSWLPGSYAILFSKPFPRFSARMNAWATWWAGTWLMGECEIND--ITADGREPGPAQGLLVKRCRFLE 183          
The following BLAST results are available for this feature:
BLAST of Gcaud9491.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3J2E8_9FLOR1.210e-7065.34Beta-carotene isomerase D27, chloroplastic n=1 Tax... [more]
A0A6T5VXJ1_9RHOD7.950e-3446.38Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7J7QQS2_9CHLO3.360e-3143.26D27-like_C domain-containing protein n=1 Tax=Scene... [more]
A0A0D2MYG1_9CHLO8.480e-3143.26D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A5J4YGW2_9CHLO5.940e-2742.42D27-like_C domain-containing protein n=1 Tax=Trebo... [more]
E1ZG85_CHLVA2.210e-2539.46D27-like_C domain-containing protein n=1 Tax=Chlor... [more]
A0A7S1XFH2_9RHOD1.700e-2034.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3E515_9CHLO4.490e-1941.09Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A7S1H0J2_HEMAN5.180e-1937.25Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1Z5JQF0_FISSO1.210e-1836.99D27-like_C domain-containing protein n=2 Tax=Fistu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53
NoneNo IPR availablePANTHERPTHR33591:SF2BETA-CAROTENE ISOMERASE D27coord: 22..178
IPR038938Beta-carotene isomerase D27-likePANTHERPTHR33591BETA-CAROTENE ISOMERASE D27coord: 22..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_925_length_16085_cov_4.297049contigNODE_925_length_16085_cov_4.297049:13141..13677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9491.t1Gcaud9491.t1Gracilaria caudata M_176_S67 malemRNANODE_925_length_16085_cov_4.297049 13141..13677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9491.t1 ID=Gcaud9491.t1|Name=Gcaud9491.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=179bp
MFVTAFCSCTPAVKLSSRPSRTFTSRSRNLSLPSASTKESLSARGPRTPA
PDYSKIDSSPLNKLFTNIFRSKLETELGRGSAERGYAGVIDTVKQLAARH
RKDPEALQLASQRVLMSLFPPWLPEAFSKMFSKPIPSFAAWINAVVTVGV
TQWLMGPSKLAEDGVTVEIERCRYLEGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038938D27-like