Gcaud9389.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9389.t1
Unique NameGcaud9389.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length991
Homology
BLAST of Gcaud9389.t1 vs. uniprot
Match: A0A2V3IX91_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX91_9FLOR)

HSP 1 Score: 702 bits (1812), Expect = 4.120e-234
Identity = 507/1158 (43.78%), Postives = 626/1158 (54.06%), Query Frame = 0
Query:    1 MAPTAEEALPSFVLDYLTKRGYTHAVQGMRIDQLRKHEQPISLAVLDNPNPFLCKWFTIFWEVYATNLVQRTPIPRHHLHPQQHPXXXXXXXXXHQLHHNPNVPQHPSHNPLAAQSQMHPNPSEVDP-TQPAPHPNHAPAVAQHSALFVNAARQRPPAHVLPPHLRNLSTQQLSAAMRNNHPALLSRQMR-REDPRRALPLQMTPNSLQLDSSLTNTLTSDLMVDPNGIDNVLTPT--NPRNDPAAAHVVAVXXXXXXXXXXXNNPRNPMSHMQSRIHGSTPLPMRAPTPPTTKSRAYALPPGLSNDAASSASRRGPMDHTSAQRAYDCAI-------------SAIDLENLSKGQPQQQPSIQPQ---------------------------HSQQLLMR-PRQITA-----------------------------------------------------------------------------------------------------------------------QAVA---ATRNDQRYLSHEAASRNGMRLTARSNPLANSLAFQAQDPQKRRDAFPAGHAASRNPAHAIEQDSAKMNVEGNSLQAAFRMGDVTLAMSQPLQAHSQALPNGSGSRVSATPGFVMPNNRISLGMSTPGFPYLPCMDGKDLTGILPQNAISVGGVNASMPNVGNPTNIASLTKKSQANSRAQSRALKNEKGVPNQSRSGGEKPSEDAAISERLQRGAQRLRDGSIQKDNVDALTKMKP-EATVNQKSGANVQSNGAKNLAPSQAASSIDTKDASRARLVHESTKVKGNNGLPPSATIPTALAPGVGMPVKTKAGEDVEAESRSGKGDRHPPANRASTPSQKSTASGGSIAVERRASQGSGTSKRTRARTKARSSGGGKRSRADRGQLARNNLSRNSVAAQTPRSTITDVKNASSVNAKMKAASRSMQADRSNPLIHVNSVIGAVTDPSRSSDKRRQNKSEGNAKARAPGPRPSQVAGEGPKLAF-EAAGEKSNEHGGHDPQHGRQSPSALAASGPAQLFEMLQPSSSGARSIDNAGLDHVDGMSQFGIVTGNHNGKVNGGGGANYPYELQPFLSAGVEEEQMLGNIGNIGSMLNNMQEAVDLGSTDFEDDSLLGPADPGDLIGRNR 989
            MAP+AE+ALP+FV+DYL KRGY +AV+GM++DQ  K EQPI  AV D+PNPFL  WF+ FW+VYA  LV RTP P H          XXXXXXX QL HNPNVPQH   NP   Q  MHPN S+VDP      HP+H P V QH ALF NA+R R    +     RN+    L  AMRNN  AL++ QMR R+DPRR L LQ+ PNSLQLD+SLTN+LTS+L+ D N I NVL     N RN+P AA     XXXXXXXXXX  NPRN + HM SR H S P+PMRAPTPP+ KSR Y   PGL++DA SSASRRGPMDH  A R Y+ A+             S    +  +   P + P+  P                            HS  L  R P Q+                                                                                                                         Q +A   A RND ++++H AA R+ MRL   SN LAN L F  Q+  ++R AF   H   RNPAH     SAKM  +  SL+ A RM D +LAMSQ LQA SQ +PN S +RVSA PGF MP N++ L M+  GF Y+P MDGKD + ILPQNA+ V GVNASM N+  P   +    +S A +RA SR +KN+  + N  R+  +KP +D  IS+R+ RGA RLR+ ++QKDN D   K+K  E +   KSGAN QS  AKN   +QA  SID KD SR+       K KG   L  S ++P  +       +K K GE+ E E+RS K DR+ P                  AVERR SQ SGT +R R+R K RS GG +RSRA  GQ ARNN SR++ AAQTPR  + +VK+A+++ A+MKA+ R+ Q D S P++H N+V+  + D S   +K R  K++ N  AR  G R +  AGE  KL F  +AG+ +NE    + Q G QSP  L+A+G AQLF M                   +G++ F IV   HNGKVNG  GANYPYEL  FL  GVEEE MLGNIGNIG+MLNNMQE VDLGST+FE+DS+LG AD GDLIGRNR
Sbjct:    1 MAPSAEQALPAFVMDYLAKRGYLNAVEGMKVDQHHKREQPIPFAVFDSPNPFLIIWFSFFWDVYAPKLVNRTPKPSH---------PXXXXXXXXQLRHNPNVPQHTPPNPHI-QXXMHPNSSQVDPPAHSIAHPSHTPPVPQHPALFANASRHRSNPQLFSTQFRNIPNPHLPPAMRNNPNALMNHQMRPRDDPRRPLSLQLAPNSLQLDTSLTNSLTSELL-DANSIGNVLVAARANHRNEPTAA--AXXXXXXXXXXXXATNPRNAVPHMHSRPHASAPVPMRAPTPPSAKSRPYPAQPGLASDAHSSASRRGPMDHPGAVRHYENAVQDESPRPNPNGTASTHSRKRTAHHLPPKSPASSPNDNMSSRLQLSVSEPAAPKRRRSYAGYNHSAALSQRMPHQLVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPQXXXXXXHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHQRMALPQANRNDPQFMAHNAA-RSSMRLPPHSNQLANQLPFPTQE--QKRQAFLQVHGNGRNPAHVSNPQSAKMTADSASLRQALRMDDPSLAMSQALQAQSQGIPNASNARVSAPPGFRMPANQLPLDMTGQGFVYVPQMDGKDFSSILPQNAVPVAGVNASMQNMRVPNATSGPNNQSHATTRAPSRTMKNDSNLSNPGRNVNDKPQDDLPISDRMSRGAARLREEALQKDNGDQSVKLKQAETSAKAKSGANSQSANAKNAQQNQAVQSIDNKDTSRSXXXXXXXKGKGGVSLSRSGSMPATMTSMANPGMKNKGGENGEGENRSTKSDRNTPTXXXXXXXXXXXXXXXXXAVERRPSQ-SGTPRRNRSRNKGRSPGGSRRSRAG-GQSARNNSSRSTSAAQTPRVAVNEVKSATALAAQMKASGRNTQGDLSAPMMHANAVMSGLPDGS-GPEKARHAKNDANTAARTAG-RQAAKAGEEAKLGFGSSAGDNNNEQAAQNAQQGGQSPGPLSATGEAQLFGM-------------------EGIAAFSIVGSGHNGKVNGSTGANYPYELSNFLGTGVEEETMLGNIGNIGTMLNNMQENVDLGSTEFEEDSILGVADAGDLIGRNR 1119          
BLAST of Gcaud9389.t1 vs. uniprot
Match: R7Q7L4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7L4_CHOCR)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-9
Identity = 202/799 (25.28%), Postives = 307/799 (38.42%), Query Frame = 0
Query:  267 SHMQSRIHGSTPLPMRAPTPPTTKSRAYALPPGLSNDAASSASRR-GPMDH---TSAQRAYDCAISAIDLENLSKGQPQ---QQPSIQPQHSQQLLMRPRQITAQAVAATRNDQRYLSHEAASRN-----GMRLTARSNPLANSLAFQAQDPQK---RRDAF-----PAGHAASRNPAHAIEQDSAKMNVEGNSLQAAFRMGDVTLAMSQPLQAHSQALPNGSGSRVSATPGFVMPNNRISLGMSTPGFPYLPCMDGKDLTGILPQNAISVGGVNASMPNVGNPTNIASLTKKSQANSRA----QSRALKNEKGVPNQSRSGGEKPSEDAAISERLQR----GAQRLR----------DGSIQKDNVDA-LTKMKPEATVNQKSGANVQS---NGAKNLAPSQAASSIDTKDASRARLVHESTKVKGNN----GLPPSATIPTALAPGVGMPVKTKAGEDVEAESRSGKGDRHPPANRAS-TPSQKSTASGGSIAVERRASQGSGTSKRTRARTKARSSGGGKRSRA---------------DRGQLARNNLSRNSVAAQTPRSTITDVKNASSVNAKMKA-ASRSMQADRSNPLIHVNSVIGAVTDPSRSSDKRRQNKSE---GNAKARAPGPRPSQV-AGEGPKLAFEAAGEKSNEHGGHDPQHGRQSPSALAASGPAQLFEMLQPSSSGARSIDNAGLDHVDGMSQFGIVTGNH---NGKVNGGGGANYPYELQPFLSAGVEEEQMLGNIGNIGSMLNNMQEAVDLG---STDFEDDSLLGPADPGDLI--GRNRA 990
            S   SR  G TP P        T +R  A+ PG  +   +   R  G       TS        +S  ++E +S+  PQ   Q  +     +Q + M+ ++ T +  A  RN+ ++ SH  AS N     G R + R+N + N   +   D  +    RDAF     P+G     + A+    ++ K   +G +   A +  D  + + Q  Q         SG      P    P   + LG S         +   D+   +  + + VG V    PN     N   L     A+ +A    Q  +++       QS  G +    D   + +L R     + R+R           G++Q    +  LT  K   T    SG + Q+   N  K    S+A  +I+T   SR R +  + K    N     LP     P+ +  G     + +   + + E+RS K DR     R   T SQKSTASGGS AVE               RT+A +S G +R R                +R      N S    +AQ  R+   + KNA + N +  A ASR+ QA     L        ++  P R S    +N+S+   G   AR       +      PKL F+     +          G Q PSA       + F   QPS  G     N  L +  G   F +   N    +GK+    G+NY YE+ P+++ GV++        ++G M++  Q   +LG     D ED  +LG  DPGDL   GR+R+
Sbjct:  297 SQSVSRKSGGTPQPDE------TGTRRTAIGPGSESGGPAKRQRSTGTFQRNAGTSPSAQLSKQLSGGNIEAMSRTLPQNGMQGHATGTSRAQVMPMQRQRQTYRPNADRRNNAQFYSHLGASENPMARGGNRYSGRTNGVPNPPPYPQNDQSQSNPHRDAFLQNQVPSGRRTPLSNANTSASNAGK-GADGRAQARAPKGSDSNIPLPQAQQ---------SGVSYPVAPLQTDPRLML-LGSSD-------MLGSSDMMNYIASSDLPVGQVYGMPPNA----NFLDLRNGGPASKKAVQGQQEASIRKNVVHDQQSGVGTDAQQTDVQTAAQLVRKEANSSHRMRPAFRGELLKQQGAMQIGKQEMPLTNEKKGKTETNMSGIDKQNRFGNDLKRNGSSRAMKTIETTGGSRGRHMDGANKNNALNTSSGALPHMGLSPSLVGSGS---KRDRVATEADMENRSTKSDRQASGTRGGGTQSQKSTASGGSGAVE--------------GRTQAANSSGTRRGRXXXXXXXXXXXXXXXXERAPPRGGNGSXGGTSAQAARNNAQEQKNAVTANLQRSAEASRTSQAGADRML-----GSSSMLMPPRGSSATHENRSQTQKGERGARVSSKHVEETDLQRAPKLPFDLGDANATAESRGPDVSGDQQPSANHMHSGLEFFP--QPSIGGGGRT-NGDLSNDAGEKAFEVQPLNFMPGDGKLGNQSGSNYGYEMSPYMANGVDDT-------DLGDMMSP-QIPANLGFGPPPDLEDAGMLG-VDPGDLAIPGRSRS 1033          
The following BLAST results are available for this feature:
BLAST of Gcaud9389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX91_9FLOR4.120e-23443.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7L4_CHOCR1.720e-925.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 964..990
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..899
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_559_length_22118_cov_3.843737contigNODE_559_length_22118_cov_3.843737:8521..12045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9389.t1Gcaud9389.t1Gracilaria caudata M_176_S67 malemRNANODE_559_length_22118_cov_3.843737 8521..12045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9389.t1 ID=Gcaud9389.t1|Name=Gcaud9389.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=991bp
MAPTAEEALPSFVLDYLTKRGYTHAVQGMRIDQLRKHEQPISLAVLDNPN
PFLCKWFTIFWEVYATNLVQRTPIPRHHLHPQQHPPQQQQPQQQHQLHHN
PNVPQHPSHNPLAAQSQMHPNPSEVDPTQPAPHPNHAPAVAQHSALFVNA
ARQRPPAHVLPPHLRNLSTQQLSAAMRNNHPALLSRQMRREDPRRALPLQ
MTPNSLQLDSSLTNTLTSDLMVDPNGIDNVLTPTNPRNDPAAAHVVAVAA
AAAAEAAAANNPRNPMSHMQSRIHGSTPLPMRAPTPPTTKSRAYALPPGL
SNDAASSASRRGPMDHTSAQRAYDCAISAIDLENLSKGQPQQQPSIQPQH
SQQLLMRPRQITAQAVAATRNDQRYLSHEAASRNGMRLTARSNPLANSLA
FQAQDPQKRRDAFPAGHAASRNPAHAIEQDSAKMNVEGNSLQAAFRMGDV
TLAMSQPLQAHSQALPNGSGSRVSATPGFVMPNNRISLGMSTPGFPYLPC
MDGKDLTGILPQNAISVGGVNASMPNVGNPTNIASLTKKSQANSRAQSRA
LKNEKGVPNQSRSGGEKPSEDAAISERLQRGAQRLRDGSIQKDNVDALTK
MKPEATVNQKSGANVQSNGAKNLAPSQAASSIDTKDASRARLVHESTKVK
GNNGLPPSATIPTALAPGVGMPVKTKAGEDVEAESRSGKGDRHPPANRAS
TPSQKSTASGGSIAVERRASQGSGTSKRTRARTKARSSGGGKRSRADRGQ
LARNNLSRNSVAAQTPRSTITDVKNASSVNAKMKAASRSMQADRSNPLIH
VNSVIGAVTDPSRSSDKRRQNKSEGNAKARAPGPRPSQVAGEGPKLAFEA
AGEKSNEHGGHDPQHGRQSPSALAASGPAQLFEMLQPSSSGARSIDNAGL
DHVDGMSQFGIVTGNHNGKVNGGGGANYPYELQPFLSAGVEEEQMLGNIG
NIGSMLNNMQEAVDLGSTDFEDDSLLGPADPGDLIGRNRA*
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