Gcaud9312.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9312.t2
Unique NameGcaud9312.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length380
Homology
BLAST of Gcaud9312.t2 vs. uniprot
Match: A0A2V3ISR4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR4_9FLOR)

HSP 1 Score: 538 bits (1385), Expect = 1.290e-189
Identity = 259/376 (68.88%), Postives = 310/376 (82.45%), Query Frame = 0
Query:    6 RILQLPSFRRA-YAKPAFHGKQRAPPFVPLLFGVLHFFRRRRATLTFVFLMVWVFVDMDSYPLWWLSWMLHGAPIADAALSHNCSKTERASLHPLVIVVPLIASQLVRVEDSLKRWLLPSSFPC-HSDAPVAHLSFFFDRAPTDAATASAVHRLRGVLRKRALATVLHTCFARVSIRFANLTREQSTNSHAMDVVHNLVITAGSNNQFEAAMRLYEAEYSHMFLMEPDVYAIRSGWVDRALREASYGAFWQRGAIMRYSPRFNLGFAPFRTRYQRHINGNGLYRLGDRCFERYRALVRKRFGNGAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNEDELRARFEEALLVHGKAQYVAFPALNVMQY 379
            R  QLPS +R  +  P    K R PP    L+ VLHF RRRRATL+F+FL+ WVF+D+D+YP+WWLSW+L+G P AD ALSHNC+KT+RA+L PLV+VVPLIASQL+RV+D+L RW+ PS  PC HS  PVAHLSFF DRA +D  TA +   LR +L++  LA VLH CFA VSI FANL+REQSTNSH+MD+VHNLVIT GSNNQFE+A+  YE  +SHM L+EPDVY+IR+GWV++AL EA YG FWQRGA MRY+PRFN+GFAPFR RYQRHINGNGLYRL DRCF+ YR LVRKR+G+ AYDVAMCQ+RL+ EN+AVYQATAHRF+VS MIV++GVT V+ED+LR +FEEALLVHGKA+YV FPALNVMQY
Sbjct:    5 RFFQLPSLKRLLFVHPP---KSRPPPVAAFLYTVLHFCRRRRATLSFIFLLTWVFLDLDAYPVWWLSWLLYGPPTADEALSHNCTKTDRAALRPLVVVVPLIASQLLRVDDALARWVSPSLAPCSHSHQPVAHLSFFLDRAMSDEPTARSARELRSMLQRPRLAAVLHRCFAHVSIAFANLSREQSTNSHSMDLVHNLVITGGSNNQFESAIHYYEKRFSHMLLVEPDVYSIRAGWVEQALEEAKYGTFWQRGATMRYAPRFNIGFAPFRARYQRHINGNGLYRLSDRCFDHYRYLVRKRYGSAAYDVAMCQYRLSIENLAVYQATAHRFQVSPMIVAVGVTRVDEDDLRNQFEEALLVHGKAKYVPFPALNVMQY 377          
BLAST of Gcaud9312.t2 vs. uniprot
Match: A0A5J4ZBG7_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZBG7_PORPP)

HSP 1 Score: 186 bits (472), Expect = 2.980e-50
Identity = 115/346 (33.24%), Postives = 177/346 (51.16%), Query Frame = 0
Query:   54 LMVWVFVDMDSYPLWWLSWMLHG-APIADAALSHNCSKTERASLHPLVIVVPLIASQLVRVEDSLKRWLLPSSFPCHSDAPVAHLSF----------FFDRAPTDAATASAVHRLRGVLRK------------RALA---TVLHTCFARVSIRFANLTREQSTNSHAMDVVHNLVITAGSNNQFEAAMRLY----EAEYSHMFLMEPDVYAIRSGWVDRALREASY--GAFWQRGAIMRYSPRFNLGFAPFRTRYQRHINGNGLYRLGDRCFERYRALVRKRFG--NGAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNEDELRARFEEALLVHGK 365
            L+ W+F+D +SYPL+W++W++ G A + D + +HNC+         LV+V+PL A Q  R+  +L+ W      P  SD    + S+          +FDR             LR +L +            ++LA   + L +CF  V I+ ANL   Q+ NS A +  ++++ T GSN QF    RL+    E+++ +MF+MEPD   +R  W+D A+  A+   G FW +G+IMRY P+FN+ F PFR  +  HINGN LYRL + CF  +    R        AYDV M  FR +   + ++ ATAHRF  + ++V++        E         ++HGK
Sbjct:  195 LLTWLFIDTESYPLYWVNWVIRGKADVVDPSFTHNCAAPPSRESARLVVVIPLTAPQTPRLIRALQLWQERDVMPACSDMYFGNASYPNAVAPDLLIWFDRPLHHPKVRKHYQELRTLLLEDQGPGAMGYDSSQSLALTRSTLRSCFNTVQIKSANLPDAQARNSFARNWFNSMLYTEGSNGQF---YRLFDKEAESQHDYMFVMEPDTIPVRPHWLD-AIHSAAVNGGDFWVKGSIMRYQPKFNIAFEPFRRSFTNHINGNALYRLREPCFRAFLDAARSEGDCEGMAYDVCMSHFRHSYSRINLHHATAHRFVYTDVVVNLSGEKFELSEALEELPNTYVIHGK 536          
BLAST of Gcaud9312.t2 vs. uniprot
Match: A0A6T6MI61_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6MI61_9RHOD)

HSP 1 Score: 176 bits (445), Expect = 1.510e-47
Identity = 103/331 (31.12%), Postives = 174/331 (52.57%), Query Frame = 0
Query:   55 MVWVFVDMDSYPLWWLSWMLHG-APIADAALSHNCSKTERASLHPLVIVVPLIASQLVRVEDSLKRWLLPSSFPCHSDAPVA--------HLSFFFDRAPTDAATASAVHRLRGVLR--KRALATVLHTCFARVSIRFANLTREQSTNSHAMDVVHNLVITAGSNNQFEAAMRLYEA--EYSHMFLMEPDVYAIRSGWVDRALREASYGAFWQRGAIMRYSPRFNLGFAPFRTRYQRHINGNGLYRLGDRCFERYRALVRKRFGN---GAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNEDELRARFEEALLVHGKAQYV 369
            ++W+ +D   YP++W    L G   + +  +   CS T+ +  H L+I +P++ +Q+ R+  SL++W+L    P  S++  +         L  +FD        + +V  L+  +   ++    +L  CF ++ I  ANLT ++S NS+ +D + +   T GSN QF A +       EY+H  +MEPD + +R  W+D+    A+ G FW +G++MR+   F++   P+R+ YQ HINGN LYRLGDRCFE +     KR+G      YD  +  +  +  N+ +Y   AHRF +S  I  +G    + +  R +     L+HGK+ +V
Sbjct:   78 LIWLLIDFQLYPIYWFGNSLRGHGDVVNPLVYTECS-TKPSQSH-LLITIPVVHTQVPRLLSSLEQWILSDVMPACSNSSESAFQQKHQPDLMIWFDLPLGHPKVSPSVVLLQNTIEESRQLKDAILSRCFGKILIDSANLTVQESRNSYWIDPIRSFPKTEGSNRQFFALIENSGLGFEYTHALIMEPDTFPVRPYWIDKVNEAANEGDFWIKGSVMRFEQVFSIAIEPYRSMYQYHINGNALYRLGDRCFESFLEDA-KRYGMCELWCYDTCINAYLHSLSNLNLYHTVAHRFIISDFIAHLGGHQFDLNTFRRQSPNTALIHGKSHFV 405          
BLAST of Gcaud9312.t2 vs. uniprot
Match: L8HG38_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG38_ACACA)

HSP 1 Score: 74.7 bits (182), Expect = 2.970e-11
Identity = 75/296 (25.34%), Postives = 119/296 (40.20%), Query Frame = 0
Query:   99 LVIVVPLIASQLVRVEDSLKRWLLPSSFPC-------HSDAP--VAHLSFFFDRAPTDAATASAVHRLRGVLRKRALATVLHTCFARVSIRFANL----------------TREQSTNSHAMDVVHNLVITAGSNNQFEAAMRLYEAEYSHMFLMEPDVYAIRSGWVDRALREA--SYGAFWQRGAIMRYSPRFNLGFAPFRTRYQRHINGNGLYRLGDRCFERYRALVRKRFG--NGAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNEDELRARFEEALLVHGK 365
            + +V P I S + R+ + +  W  P   PC         D P  V + S+  D+ P   +T          L++   A     CFA + I  A L                 ++++    A     + V+    N   + A   +   Y +   MEPD+ A+R+GW+D+  RE       FW +G+I    P++          +  HINGN +Y +GD  F  Y   +R+  G     +DV M +FR   +   + Q T HRF     I + GV+  +  +L        LVH K
Sbjct:   49 IAVVRPFIPSHVDRLVEDMASWERPEFRPCALPAGNDDGDRPDLVLYFSYPLDQFPEVVST----------LQRAWAAAAWSPCFAEMRIISAGLDPAADRYLPSQKTAESAKDEAEAEEAKPPAPSGVVLMYFNLMLDPA---FGEAYEYFLYMEPDLTAVRAGWLDQFSRECHDELHNFWMKGSIYA-GPKYVSDETDSPWLF--HINGNAIYHVGDPGFRDYIKKLRQLEGALTNPFDVTMYEFR--RQRFTLSQRTIHRFLYGEYIQNYGVSGYSLRQLLVDKPRTFLVHKK 326          
BLAST of Gcaud9312.t2 vs. uniprot
Match: Q00S89_OSTTA (Unnamed product n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00S89_OSTTA)

HSP 1 Score: 71.2 bits (173), Expect = 1.210e-9
Identity = 77/302 (25.50%), Postives = 132/302 (43.71%), Query Frame = 0
Query:   89 SKTERASLHPLVIVVPLIASQLV-RVEDSLKRWLLPSSFPCHS--DAPVA---HLSFFFDRAPTDAATASAVHRLRGVLRKRALATVLHTCFARVSIRFANLTREQSTNSHAMDVV-HNLVITAGSNNQFEAAMRLYEAEYSHMFLMEPDVYAIRSGWVDRAL----REASYGAFWQRGAIMRYSPRFNLGFAPFRTR-YQRHINGNGLYRLGDRCFERYRALVRKRFG-------------NGAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNEDELRARFEEALLVHGK 365
            S  + +S+H L +V+P +  Q   R++ S++ W    + PC     +PV    H +  FD          A++ ++   R   L+  +  CF  V +  A L+ E+        V+ H   + A          R++   +SH    EPDV+ IR+GW++RA+       +   +WQ G+   Y    +       TR    HINGN LY +    F  YRA++RK F              NG +D A+ + R +  +   +Q   ++F +   I + G ++ +   +R  + E  L+HGK
Sbjct:   80 SHLQNSSVH-LAVVMPFLECQFEGRLKPSIQSW--QHTQPCTRALSSPVTLILHHNKIFD--------VGAINDVKNFWRS--LSREVKNCFTSVELWSAGLSAEEDVYPMGPCVMFHRTFVRA----------RIFG--FSHWLQYEPDVFPIRTGWLERAIFLVEDNPTCDLWWQLGSEPSYDSVTDFLKTSTGTRDVDLHINGNALYCVSSPEFAAYRAMMRKLFPPMGCLGDKYIGEFNG-HDHALYRARRSDSSTR-FQHVHYKFRLDPFIRNFGASAFDLQTIRTMYPETYLIHGK 354          
The following BLAST results are available for this feature:
BLAST of Gcaud9312.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ISR4_9FLOR1.290e-18968.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4ZBG7_PORPP2.980e-5033.24Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A6T6MI61_9RHOD1.510e-4731.12Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
L8HG38_ACACA2.970e-1125.34Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
Q00S89_OSTTA1.210e-925.50Unnamed product n=2 Tax=Ostreococcus tauri TaxID=7... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3285_length_3708_cov_3.161736contigNODE_3285_length_3708_cov_3.161736:2307..3446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9312.t2Gcaud9312.t2Gracilaria caudata M_176_S67 malemRNANODE_3285_length_3708_cov_3.161736 2307..3446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9312.t2 ID=Gcaud9312.t2|Name=Gcaud9312.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=380bp
MVRAPRILQLPSFRRAYAKPAFHGKQRAPPFVPLLFGVLHFFRRRRATLT
FVFLMVWVFVDMDSYPLWWLSWMLHGAPIADAALSHNCSKTERASLHPLV
IVVPLIASQLVRVEDSLKRWLLPSSFPCHSDAPVAHLSFFFDRAPTDAAT
ASAVHRLRGVLRKRALATVLHTCFARVSIRFANLTREQSTNSHAMDVVHN
LVITAGSNNQFEAAMRLYEAEYSHMFLMEPDVYAIRSGWVDRALREASYG
AFWQRGAIMRYSPRFNLGFAPFRTRYQRHINGNGLYRLGDRCFERYRALV
RKRFGNGAYDVAMCQFRLATENVAVYQATAHRFEVSAMIVSIGVTSVNED
ELRARFEEALLVHGKAQYVAFPALNVMQY*
back to top