Gcaud9277.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9277.t1
Unique NameGcaud9277.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length439
Homology
BLAST of Gcaud9277.t1 vs. uniprot
Match: R7QIF8_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QIF8_CHOCR)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-14
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 0
Query:  157 YIFSKPASG--SATLPPLNWVERKISGATGVG-GWYIMIAESDGTPSKTPAQPAGVSEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA--NKRSVNVINVDALNPAYEY 277
            Y+FS+ +    S  +P  +W+++ IS    V   + + ++E++G  S  P    G    + PNQ CP ALH  W     D  DPD  G  + TWHP WDPCFWCA  ++   +  ++    P Y Y
Sbjct:    6 YVFSRQSGSDNSIVIPSSSWIQKHISARFRVFLNFQVRLSEANGRASPMPGYFQG--SMVAPNQPCPSALHETWRVKMDDPHDPDTRGHYFQTWHPAWDPCFWCAYGHEHGSSPQHLMRYTPKYGY 129          
BLAST of Gcaud9277.t1 vs. uniprot
Match: UPI0003709A50 (hypothetical protein n=1 Tax=Deinococcus apachensis TaxID=309886 RepID=UPI0003709A50)

HSP 1 Score: 67.8 bits (164), Expect = 1.650e-8
Identity = 65/243 (26.75%), Postives = 102/243 (41.98%), Query Frame = 0
Query:   28 PAYSDALNPVLVSSWTVLNGNILTEGVYFPRYTAHRFAPISDKSSMIYH-GLDWFYA---SNFGQPATDDFIRLNLHRDAKI--FMVIGVRYDRSLPLVTL-------PGWSSEGWVERVDGEKEFVYGVHQKDSKWLPTRAYIFSKPASGSATLPPLNWVERKISGATGVGGWYIMIAESDGTPSKTPAQPAGVSEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWC 257
            P  +  + P LV+++  + G +        +Y + R+AP    + +    G+  F     SN GQ A  D + L       I  F   G++ +R+  +  +       P W    W ER          V     +  P     F    +GS  L P+++        TG     +++ E++GT S  P+ PAG +  + PNQ CP      WV  +     PD  G+M+PTWHPQ DP +WC
Sbjct:   39 PTPAPTVQPTLVAAYWRMQGEL-------QKYDSLRYAPRQFNAGLTLDPGVTHFGTQTISNAGQYAGWDHLGLPNSYTVAIDTFQQFGLKLNRAAQVGLIWRAGNYRPSWLGS-WTERGS--------VTLTSGRTYPVFVKTFQ---AGSVDLLPMSYPSE-----TGTQFSSVIVGEANGTGSAAPSVPAGQTPPV-PNQTCP-----AWVHDQYKALGPD--GQMYPTWHPQVDPVYWC 249          
BLAST of Gcaud9277.t1 vs. uniprot
Match: A0A2V3IPE9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE9_9FLOR)

HSP 1 Score: 62.4 bits (150), Expect = 9.500e-7
Identity = 74/300 (24.67%), Postives = 126/300 (42.00%), Query Frame = 0
Query:    1 MATYILVLVHFLLVKLVTSMPLTCADHPAYSDAL------NPVLVSSW-TVLNGNILTEGVYF-PRYTAHRFAPISDKSSMIYHGLDWFYASNFGQPATDDFIRLNLHRDAKIFMVIGVRYDRSLPLVTL-------PGWSSEGWVERVDGEKEFVYGVHQKDSK-WLPTRAYIFSK----------PASGSATLPPLNW---------VERKISGATGVGGWYIMIAESDGTPSKTPAQPAGV---SEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRM-----WPTWHPQWDPCFWC 257
            M  + L L H L +++ T    T  DHP Y+ +       NPV+++ +    N + LT  + F P   ++   P  +  S     LD  Y    G  +T+ F+ ++L+  A++FM++  R      L  L         WS    +    G +  V    +   + +LP++A +             P  GS  +  LN          VE +++G+       +   E  G P K  +  +G    +  +VPNQRCP+ LH++ VT   +T D +V+  +     W +WH   D  +WC
Sbjct:    1 MVGFALFLRHVLALEIPTY---TYRDHPLYTRSEYNETRPNPVVMNKYYRYRNKDKLTVSMLFAPNSASYGRLPTLEPLSTT--PLDALYIPGSGVDSTEPFVEVHLNYAARVFMLLNGRGLHGKELTNLHSVQGLSSNWSGLFAIRSTHGGRISVGDAQRLGRELFLPSQAAVVESVVEKDAVLTVPHPGSIRVNGLNCSRMTLLFAQVEGEVNGS-------VRAFEYPGVPEKVVSPMSGEEVETVEVVPNQRCPEWLHDLHVT---ETRDAEVARAVGEPLVWRSWHSAIDSVYWC 285          
BLAST of Gcaud9277.t1 vs. uniprot
Match: A0A6L5FAN6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L5FAN6_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 1.030e-6
Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  188 WYIMIAESDGTPSKTPAQPAGVSEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA 258
            + +++AE+DGTPS  P  P G    +V  ++CP      WV     T  PD  G+ + TWHPQWDP +WC+
Sbjct:  381 YLVLVAEADGTPSDAPPVPDGRDTPVV-GEKCPT-----WVHGRHTTRGPD--GKSYETWHPQWDPVYWCS 443          
BLAST of Gcaud9277.t1 vs. uniprot
Match: A0A2W4M6J1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4M6J1_9CHLR)

HSP 1 Score: 61.2 bits (147), Expect = 1.830e-6
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0
Query:  188 WYIMIAESDGTPSKTPAQPAGVSEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA---NKRSVNVINVDALNPAYEY 277
            + ++ AE +G PS  PA P G+ +    N  CP  +H+ +VT     S PD  G+++PTWHPQ DP +WC       S   +  +   PAY Y
Sbjct:  139 YLVLFAEENGQPSAAPAVPEGL-QVPQANAACPSWVHDRYVT-----SGPD--GKLYPTWHPQIDPVYWCYFGHEHGSDPGLFAEGRAPAYGY 223          
The following BLAST results are available for this feature:
BLAST of Gcaud9277.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
R7QIF8_CHOCR1.100e-1434.13Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
UPI0003709A501.650e-826.75hypothetical protein n=1 Tax=Deinococcus apachensi... [more]
A0A2V3IPE9_9FLOR9.500e-724.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6L5FAN6_9ACTN1.030e-640.85Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A2W4M6J1_9CHLR1.830e-636.56Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..438
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_694_length_19564_cov_4.578750contigNODE_694_length_19564_cov_4.578750:8545..10330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9277.t1Gcaud9277.t1Gracilaria caudata M_176_S67 malemRNANODE_694_length_19564_cov_4.578750 8545..10330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9277.t1 ID=Gcaud9277.t1|Name=Gcaud9277.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=439bp
MATYILVLVHFLLVKLVTSMPLTCADHPAYSDALNPVLVSSWTVLNGNIL
TEGVYFPRYTAHRFAPISDKSSMIYHGLDWFYASNFGQPATDDFIRLNLH
RDAKIFMVIGVRYDRSLPLVTLPGWSSEGWVERVDGEKEFVYGVHQKDSK
WLPTRAYIFSKPASGSATLPPLNWVERKISGATGVGGWYIMIAESDGTPS
KTPAQPAGVSEAIVPNQRCPDALHNMWVTPEVDTSDPDVSGRMWPTWHPQ
WDPCFWCANKRSVNVINVDALNPAYEYNDDLMRGKYEEWTTNTICSVDGH
YGMLTMDIRNPITAIVSPERADESVNLGIVKDGVMTRNDGSSRLVRFRHF
KFGDEYCNKLLPDVSGDRSADGTFYTDASGSKLMSGPSSTSIRQFVKPGF
KIEISGDYEVVDSFGDEFIPDTRAGRSSNGYGIDPNVN*
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