Gcaud9276.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9276.t1
Unique NameGcaud9276.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length440
Homology
BLAST of Gcaud9276.t1 vs. uniprot
Match: R7QIF8_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QIF8_CHOCR)

HSP 1 Score: 85.1 bits (209), Expect = 2.670e-14
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 0
Query:  155 RHAYILSRPA--TNSATLPLLNWVKRKISGATGVG-GWYIMIAERDGTPSKPPAQPATVTETILPNQRCPDALHNRWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA--NKRSVNVINVDALNPAYDY 278
            ++ Y+ SR +   NS  +P  +W+++ IS    V   + + ++E +G  S  P         + PNQ CP ALH  W     D  DPD  G  + TWHP WDPCFWCA  ++   +  ++    P Y Y
Sbjct:    3 QYVYVFSRQSGSDNSIVIPSSSWIQKHISARFRVFLNFQVRLSEANGRASPMPGY--FQGSMVAPNQPCPSALHETWRVKMDDPHDPDTRGHYFQTWHPAWDPCFWCAYGHEHGSSPQHLMRYTPKYGY 129          
BLAST of Gcaud9276.t1 vs. uniprot
Match: A0A399F6H8_9DEIN (Uncharacterized protein n=3 Tax=Meiothermus TaxID=65551 RepID=A0A399F6H8_9DEIN)

HSP 1 Score: 73.2 bits (178), Expect = 3.070e-10
Identity = 73/266 (27.44%), Postives = 111/266 (41.73%), Query Frame = 0
Query:   26 DHPAYFQAL---NPVLVSSWTVLN---GNNQTEGVYYPRYSAHRFAPISNKSSMIYNGLDWFYASNYDEPATDKFIRLNLHRDAMIFLVIGVSYDSEHPHVTLPGWNSEGWVERIDDLENEFV--YGVHQNNSKWLPRHAYILSRPATNSATLPLLNWVKRKISGATGVGGWYIMIAERDGTPSKPPAQPATVTETILP--NQRCPDALHNRWVTPEV-DTSDPDVSGRMWPTWHPQWDPCFWC--ANKRSVNVINVDALNPAYDY 278
            DHP + Q L   N  LV+ +  +N    +   E  Y       ++ P  +K  + Y G D      + +      +R++L+R+A + +V       E   + L GW  +G +         F   +G  +            L  PA  S         K K S       ++++I ER G  SKPPA PA + ET  P  N  CPD L N W   +V   + PD  G+ + TWHPQ DP +WC   ++   +   V    PA++Y
Sbjct:   21 DHPLFKQGLSRDNLPLVARYYWVNEVGDDRHAEAAY----GGLKYKPRQSKY-LGYEGWDVLEVQLWPDEVRSDLVRIHLNREARVTVVW------EDSALWLAGWG-KGSLSTSSKTYTTFTKDFGAGE----------IALGSPAAGS---------KGKDSPR-----YFVLIGERGGVGSKPPALPAGIAETDRPQPNSTCPDWLENAWTVKQVYGVTAPD--GQDYKTWHPQIDPIYWCYYGHEHGSDPALV-GYKPAFEY 247          
BLAST of Gcaud9276.t1 vs. uniprot
Match: A0A2W4M6J1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4M6J1_9CHLR)

HSP 1 Score: 61.6 bits (148), Expect = 1.380e-6
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0
Query:  189 WYIMIAERDGTPSKPPAQPATVTETILPNQRCPDALHNRWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA---NKRSVNVINVDALNPAYDY 278
            + ++ AE +G PS  PA P  + +    N  CP  +H+R+VT     S PD  G+++PTWHPQ DP +WC       S   +  +   PAY Y
Sbjct:  139 YLVLFAEENGQPSAAPAVPEGL-QVPQANAACPSWVHDRYVT-----SGPD--GKLYPTWHPQIDPVYWCYFGHEHGSDPGLFAEGRAPAYGY 223          
BLAST of Gcaud9276.t1 vs. uniprot
Match: A0A6L5FAN6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L5FAN6_9ACTN)

HSP 1 Score: 59.7 bits (143), Expect = 7.360e-6
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  189 WYIMIAERDGTPSKPPAQPATVTETILPNQRCPDALHNRWVTPEVDTSDPDVSGRMWPTWHPQWDPCFWCA 259
            + +++AE DGTPS  P  P    +T +  ++CP  +H R  T       PD  G+ + TWHPQWDP +WC+
Sbjct:  381 YLVLVAEADGTPSDAPPVPDG-RDTPVVGEKCPTWVHGRHTT-----RGPD--GKSYETWHPQWDPVYWCS 443          
The following BLAST results are available for this feature:
BLAST of Gcaud9276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QIF8_CHOCR2.670e-1433.33Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A399F6H8_9DEIN3.070e-1027.44Uncharacterized protein n=3 Tax=Meiothermus TaxID=... [more]
A0A2W4M6J1_9CHLR1.380e-636.56Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A6L5FAN6_9ACTN7.360e-639.44Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..439
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_694_length_19564_cov_4.578750contigNODE_694_length_19564_cov_4.578750:5836..7622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9276.t1Gcaud9276.t1Gracilaria caudata M_176_S67 malemRNANODE_694_length_19564_cov_4.578750 5836..7622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9276.t1 ID=Gcaud9276.t1|Name=Gcaud9276.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=440bp
MAIYLLILFHFLLVQFVDSTPLTCADHPAYFQALNPVLVSSWTVLNGNNQ
TEGVYYPRYSAHRFAPISNKSSMIYNGLDWFYASNYDEPATDKFIRLNLH
RDAMIFLVIGVSYDSEHPHVTLPGWNSEGWVERIDDLENEFVYGVHQNNS
KWLPRHAYILSRPATNSATLPLLNWVKRKISGATGVGGWYIMIAERDGTP
SKPPAQPATVTETILPNQRCPDALHNRWVTPEVDTSDPDVSGRMWPTWHP
QWDPCFWCANKRSVNVINVDALNPAYDYNDDLMRGQYEEWTTNTICSVDG
HYGMLTMDIRNPITAIVSPERANESVNLGIVKNGVMTRNDGSSRLVRFRQ
FKFGEDYCNLLLRDPLGDLSVNGTFYTDAIGSKLMSGPSSASIRQFVKPG
LKIDITGDYEVVDPWGGELVLDTPAARSSNGYGIDPNVN*
back to top