Gcaud9243.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9243.t1
Unique NameGcaud9243.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length450
Homology
BLAST of Gcaud9243.t1 vs. uniprot
Match: A0A2V3IEM7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM7_9FLOR)

HSP 1 Score: 398 bits (1023), Expect = 5.730e-132
Identity = 205/425 (48.24%), Postives = 285/425 (67.06%), Query Frame = 0
Query:   28 ALQKLYDAVGPGMPKGLKSTSIP---SPLSDAKVLTYNYDEGHAGRLSVPGTPGGSVEFDWVLSHPDFHKLVLTDLAFKDVDAAKEEYSEEAIMNFFVPGLNTLHQPSEGETSTMERMVHYAKVLLTIPMAQIHIGTSFDQGDVNIDASRAPLLRALFSGHGSDMPGSVKPDFDDGKTFSWNCRQVDNVQLALSQQNTIDTPVKEDVRDLLKTTKDENGKPFVLIGYSRGSIECEAALRKYIGDCSRVEKKEDIEAR-LRERVTVLTVGSASHEFPDGPAYIHLAAWTDPLSRTSGITAKNNAEGAGKDAVFLNCSSPYHHDSFDNHNFGVITSQFLSLVLEASKAKNLRDLWEKAQAGEMVIPDDADRVTRAMIQMTKGYEWLWDTGRAWKDIPMGALPNPEEAERLLRERMGDSFVDRIRRNF 448
            ALQ+L+DA+ P +PK LKST +P   SP+ DA VL +NYDEGH+ R +VP T GGSV+F++V+  P   K ++T L+    + A     E  I   F+PGLNTLH+P  GET+T +R+ +Y +VL +  MAQ+H GTS DQGDV + A RA  LR   S   + +P + +P  D G    W+ RQ+D +Q  LS  N IDTP+K+ +RDLLK +   +G+  VL+GYSR S++  +A++ YI        +ED+  R LR+RVTV+TVGSA+  +PDGPAY+HLAA+ DPL+  SG+T+K+NA  AGKDAVFLN +SP+   +FD+HNFG ++SQ+LS+ + A+ A  LRDLWEK Q     +P + D + RAMI  T G +WLW    AWK + + ALP+P+ AE +LRE  GD+FVD + R+F
Sbjct:   22 ALQELFDALNPELPKDLKSTEVPAPPSPIPDATVLHFNYDEGHSARFTVPQTQGGSVDFEYVMDRPTPLKFLITTLSIPAPEPAPN--MENTI---FMPGLNTLHEPKPGETTTEQRLEYYVRVLRSPTMAQLHPGTSLDQGDVRLSAKRAVALRLAVSALSAVVPDTFEPKID-GDDVIWSARQLDFIQTGLSSFNLIDTPLKQRLRDLLKRSCAPDGESVVLVGYSRSSVDIRSAVQDYIRQQKADGVEEDVVQRTLRDRVTVVTVGSATAGYPDGPAYVHLAAFEDPLASASGVTSKHNANRAGKDAVFLNFTSPFARGAFDSHNFGALSSQYLSVAMAANGATGLRDLWEKVQQNGKKVPPNEDELLRAMIVCTDGTQWLWSPEEAWKGVSVDALPDPDRAEAVLREGFGDAFVDALIRDF 440          
BLAST of Gcaud9243.t1 vs. uniprot
Match: A0A6P0T7U9_9CYAN (Uncharacterized protein n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T7U9_9CYAN)

HSP 1 Score: 195 bits (495), Expect = 3.270e-53
Identity = 131/431 (30.39%), Postives = 218/431 (50.58%), Query Frame = 0
Query:   25 AVDALQKLYDAVGPGMPKGLKST--SIPSPLSDAKVLTYNYDEGHAGRLSVPGTPGGSVEFDWVLSHPDFHKLVLTDLAFKDVDAAKEEYSEEAIMNFFVPGLNTLHQPSEG---ETSTMERMVHYAKVLLTIPMAQIHIGTSFDQGDVNIDASRAPLLRALFSGHGSDMPGSVKPDFDDGKTFSWNCRQVDNVQLALSQQNTIDTPVKEDVRDLLKTTKDENGKPFVLIGYSRGSIECEAALRKYIGDCSRVEKKEDI---------EARLRERVTVLTVGSASHEFPDGPAYIHLAA-------WTDPLSRTSGITAKNNAEGAGKDAVFLNCSSPYHHDSFDNHNFGVITSQFLSLVLEASKAKNLRDLWEKAQAGEMVIPDDADRVTRAMIQMTKGYEWLWDTGRAWKDIPMGALPNPEEAERLLRE 434
            ++  + K+ +  G G+P  +  T  ++ +P+        NYDEG+ G  S+PG  G + +F  +++  D  + +  +L F D    ++E+        F PGLNTLH    G   E +  +R+    + +L  P++ +H+GT  DQGD  +  S    +  L   H       V P+   G    +N RQ D V++ LSQ+       ++ V  LL+  +    +P V + YSR + E   AL+ YIGD   ++++E+I         EA LRE +TVLT+G+A  ++PDGPAYIH +         TDPL+   G+   +  EGAG+DAVFL+    +    FD HNFG   +  L L+++ +     R +WE+ Q G + +P+       A + +T G +W+W+   AW  +    LP  ++A+R++ +
Sbjct:   85 SIPTVLKMAELFGAGLPDDIAYTPANVKNPVLRPMAFFANYDEGYCGHFSIPGEKGAAADFAQIMAQADPFEFIRKNLTFGD--QGRDEWV------IFSPGLNTLHARKPGWEQEQTAPQRLEEQYQPILGTPISHLHLGTDMDQGDAVVPLSLEGKVF-LEQMHPQLQAAGVMPEMR-GDYAVFNSRQRDRVEVLLSQKGLARPLFQQHVVRLLQVNETAQ-RPIVWMAYSRATPELSGALQTYIGDY--IQRRENIGVDVAKAQVEAFLREHLTVLTIGNAIRQWPDGPAYIHYSGRSDRPEGGTDPLTNGMGVHI-DAPEGAGRDAVFLHADGLF--SGFDAHNFGASGAATLKLIMDLNGFTTYRQIWEQGQGGAIKVPNYEQ--IAAQVVLTDGGKWVWEHQVAWNGV---YLPTYQDAQRIIAD 494          
BLAST of Gcaud9243.t1 vs. uniprot
Match: A0A1X6NVN5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVN5_PORUM)

HSP 1 Score: 179 bits (455), Expect = 3.390e-48
Identity = 125/413 (30.27%), Postives = 200/413 (48.43%), Query Frame = 0
Query:   59 LTYNYDEGHAGRLSVPGTPGGSVEFDWVLSHPDFHKLVLTDLAFK--DVDAAKEEYSEEAIMNFFVPGLNTLHQP-SEGETSTMERMVHYAKVLLT-IPMAQIHIGTSFDQGD--VNIDASRAPLLRALFSGHGSDMPGSV----KPDFDDGKTFSWNCRQVDNVQLALSQQNTIDTPVKEDVRDLLKTTKDEN------------GKPFVLIGYSRGSIECEAALRKYIGDCSRVEKKEDIEARLRERVTVLTVGSASHEFPDGPAYIHLAAWTDPLSRTSGITAKNNAEGAGKDAVFLNCSSPYHHDSFDNHNFGVITSQFLSLVLEASKAKNLRDLWEKAQAGEMVIPDDADRVTRAMIQMTKGYEWLWDTGRAWKDIPMGALPNPEEAERLLRERMGDSFVDRIRRNFP 449
            + +NYD GH GR+SVPG+ GGSV+  W L        +   LAF    V A  +  +    + FF PGLNTLHQ  +  +TS+++R+VHYA++L     +AQ+H GT  DQGD  + +  +  PL  AL +   + +   V    +    D +T     R  D VQ  LS  N +DT +K   R L+     E                 VLI YSR ++E  AA R ++    R  +   + ARLR R+ ++T+G+ +  +P G AY+H+++  D L+   G++A   A   G  A F++  SP+     + HNF  +    ++             ++E  +AG    P D + +TRA + ++    +L+     W  + +  LP+ + A RLLR R+  ++   +   FP
Sbjct:    1 MRFNYDAGHDGRVSVPGSDGGSVDLRWALRRGAPWAALTGRLAFTAAPVGAGPDTRAGGGEVAFFSPGLNTLHQSVTWDKTSSVDRVVHYARLLGGGWSLAQLHCGTLMDQGDSPIRLAGAPPPLFAALSAVEAALVAAGVANVPRLADADAETAFLPSRARDAVQTVLSTLNAVDTRLKAAYRLLMAAAAGEPLPSSAGLAAVPPAPRLVLITYSRSTVEVAAAARAFLAAHPRATRAA-VAARLRARLLIVTIGACARSYPPGLAYLHVSSPADTLTSRFGVSADRPAGAGGDGAAFVHPPSPFFEGELEAHNFATLLCPHVAARAAVHGVVGWWGVYEAVRAGRFGAPRDMEDLTRAAMVVSGAERFLFAPDATWASVGVTGLPDRDAALRLLRARVPGAWSAALPAIFP 412          
BLAST of Gcaud9243.t1 vs. uniprot
Match: A0A7S2XQT2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQT2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.140e-15
Identity = 55/191 (28.80%), Postives = 95/191 (49.74%), Query Frame = 0
Query:  247 VLIGYSRGSIECEAALRKYIGDCSRVEKKEDIEARLRERVTVLTVGSASHEFPDGPAYIHLAAWTDPLSRTSGITAKNNAEGAGKDAVFLNCSSPYHHDSF-----------DNHNFGVITSQFLSLVLEASKAKNLRDLWEKA-----------------QAGEMVIPDDA-DRVTRAMIQMTKGYEWLW 408
            VL+ YS  +++   AL+ +  + +++  +E +E  L + VTV+++GS S +FPDGPAY+H++   DPL  T G + + + +G GK AV+L   SP+   +            + HN      Q L++++  +  +  R L++ A                 Q   M +P +  D +  AMI+ T G  WLW
Sbjct:   31 VLMAYSSANVDVSEALQDWKNEKTQIMAEETVERILFQAVTVVSIGSLSRKFPDGPAYLHVSMMDDPLMSTLGTSLQRSGDG-GKGAVYLQSLSPFMPSTLFHGHTIRTLTLEAHNLCACLIQLLAILMRVNGTRAFRGLFDLASKTVESDISTDHFAVTSQNTFMDVPPNLEDELLPAMIRATGGLGWLW 220          
The following BLAST results are available for this feature:
BLAST of Gcaud9243.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IEM7_9FLOR5.730e-13248.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6P0T7U9_9CYAN3.270e-5330.39Uncharacterized protein n=1 Tax=Cyanothece sp. SIO... [more]
A0A1X6NVN5_PORUM3.390e-4830.27Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2XQT2_9STRA2.140e-1528.80Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_384_length_27336_cov_4.346963contigNODE_384_length_27336_cov_4.346963:16896..18245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9243.t1Gcaud9243.t1Gracilaria caudata M_176_S67 malemRNANODE_384_length_27336_cov_4.346963 16896..18245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9243.t1 ID=Gcaud9243.t1|Name=Gcaud9243.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=450bp
MVGELSALSGMDAILPGEGVPVWGAVDALQKLYDAVGPGMPKGLKSTSIP
SPLSDAKVLTYNYDEGHAGRLSVPGTPGGSVEFDWVLSHPDFHKLVLTDL
AFKDVDAAKEEYSEEAIMNFFVPGLNTLHQPSEGETSTMERMVHYAKVLL
TIPMAQIHIGTSFDQGDVNIDASRAPLLRALFSGHGSDMPGSVKPDFDDG
KTFSWNCRQVDNVQLALSQQNTIDTPVKEDVRDLLKTTKDENGKPFVLIG
YSRGSIECEAALRKYIGDCSRVEKKEDIEARLRERVTVLTVGSASHEFPD
GPAYIHLAAWTDPLSRTSGITAKNNAEGAGKDAVFLNCSSPYHHDSFDNH
NFGVITSQFLSLVLEASKAKNLRDLWEKAQAGEMVIPDDADRVTRAMIQM
TKGYEWLWDTGRAWKDIPMGALPNPEEAERLLRERMGDSFVDRIRRNFP*
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