Gcaud9160.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9160.t1
Unique NameGcaud9160.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length486
Homology
BLAST of Gcaud9160.t1 vs. uniprot
Match: A0A2V3IW81_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW81_9FLOR)

HSP 1 Score: 727 bits (1877), Expect = 5.680e-261
Identity = 344/485 (70.93%), Postives = 411/485 (84.74%), Query Frame = 0
Query:    1 MVSKVHLEPNGSNQTPWGLCWADLFTELRPTHGETTAIECIVSQVEDLLKNADLSHDLRPGGSFGKNTMMKGEHELRLYSIQHDFQPENYFEAHLKPILQAFKSEQRFVDLKESGYAAVFNSNGIQVRVYAAGTLYGGPKDLLLPPRSSEKQSSDVLPDVARGHQLARDVHVETSCSVLRTQVIANQAPLYHDLVRVAKKWRSTSDFMSRAETPGDYLLELLMLEAFTGAPCMPHGPELYGIVLRRFLSLAATQCGSGSDVMADDSMPKSMLWWDKYYNRGVIDMCMAKGLLDVRRSDLCSIIVVDPAVPFINVARSVPDWTEMRRCARDSLSSFQNTDLLDSLQDKVQALTEGMREAISGMQNQIESLQRLAKSPRRWTGVVQFNEVHMNSAAWTKVMEVELQTIPWRVYARKARTDGTGYMTCVDISLQMMGKKLGQTLEVDVSFRGGTSSLIFDPNNDHVLICKRSEIVRNRDYAMQITVIG 485
            MVS    E + S +T WGL W D+F  LRP+  E    + I+SQVED+LK+A L H+L PGGSFGK T+  GE++L+L+SI  DFQP+NYFE HLKP++ A KS   F DLKE+G AAVFN +GI+VR+ AAG LYGGPKDLLLP + +EKQS +VLPD+ RG Q+AR+VHVET+C VLR+QVIANQ PLYHD+VR AKKWRST DF+S A+ PGDYL+ELLMLEAFTGAPCMP GP LY   +RRFLSLAA QCGSGSDVMADDSMPKSMLWWD+YYNRG ID+CMAKGLLDV RSDLCSIIVVDPAVPF+NVARSVPDW+EMR+CARDSLSSFQNTDLLDSL  +++AL+EGM + ++GM+NQIE+LQ L  SPRRW+G +QFNEVHMNS AWTKVMEVELQT+ WR+ ARKART+GTGY +CVDISLQ +GKKL +T++VDV FRGGTS+L+FD + DHVLIC+RSEIVRNRDY++Q+T++G
Sbjct:    1 MVSNTLQEHSASTETSWGLPWEDVFAALRPSPDEINLYKSIISQVEDVLKDAHLPHNLFPGGSFGKKTLTTGENKLQLFSIYDDFQPDNYFEVHLKPMMAALKSANVFSDLKENGLAAVFNKDGIEVRILAAGVLYGGPKDLLLPLKENEKQSGEVLPDILRGQQIAREVHVETTCGVLRSQVIANQCPLYHDMVRSAKKWRSTCDFISSADMPGDYLIELLMLEAFTGAPCMPRGPGLYSTTMRRFLSLAAAQCGSGSDVMADDSMPKSMLWWDRYYNRGTIDLCMAKGLLDVGRSDLCSIIVVDPAVPFVNVARSVPDWSEMRKCARDSLSSFQNTDLLDSLDHRLRALSEGMLDTVNGMRNQIEALQLLVNSPRRWSGAIQFNEVHMNSDAWTKVMEVELQTVKWRINARKARTEGTGYTSCVDISLQRIGKKLERTIDVDVLFRGGTSNLVFDADVDHVLICRRSEIVRNRDYSIQVTIVG 485          
BLAST of Gcaud9160.t1 vs. uniprot
Match: R7QIV2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV2_CHOCR)

HSP 1 Score: 489 bits (1258), Expect = 8.220e-167
Identity = 252/490 (51.43%), Postives = 336/490 (68.57%), Query Frame = 0
Query:   10 NGSNQTPWGLCWADLFTELRPTHGETTAIECIVSQVEDLLKNADLSH-DLRPGGSFGKNTMMKGEHELRLYS-IQHDFQPENYFEAHLKPILQAFKSEQ--RFVDLKESGYAAVFNSNGIQVRVYAAGTLYGGPKDLLL-------PPRSSEKQSSDVLPDVARGHQLARD---VHVETSCSVLRTQVIANQAPLYHDLVRVAKKWRSTSDFMSRAETPGDYLLELLMLEAFTGAPCMPHGPELYGIVLRRFLSLAATQCGSGSDVMADDSMPKSMLWWDKYYNRGVIDMCMAKGLLDVRRSDLCSIIVVDPAVPFINVARSVPDWTEMRRCARDSLSSFQNTDLLDSLQDKVQALTEGMREAISGMQNQIESLQRLAKSPRRWTGVVQFNEVHMNSAAWTKVMEVELQTIPWRVYARKARTDGTGYMTCVDISLQMMGKKLGQTLEVDVSFRGGTSSLIFDPNNDHVLICKRSEIVRNRDYAMQITVIG 485
            + S +TPWG  W  LFT LRP+  +   +  +V  ++D L+  ++SH  L  G  FGK T++ G+  L +Y+     F   +YFE+HL+P+L A  S +  RF D+ + G A  F+  G+ VR++AAG L  GPK+LL           ++EK+SS V  + ARG   A D   +HVETSC++LR   IA Q+PLY D+VRVAKKWR+TSDFM     PGDYLLELLMLEA+ GAP  P  P+ Y  + RRFLSL ++Q G+GS+V+ADD+MP+S L W   YN G ++  +A GLL    +D CS++VVDPAVPF NVA +V DW E+R  AR+SLS FQN++LL+ LQ K+ +L+EGM E I GMQ +I  LQ L +SPRRW+G +QF EVHMN   WTKV EVEL+T+ WRV ARK+RTDG GY   VDISLQ +GK L +T++VDV+FR  TS+L+FD NNDHVLI  +SE++RNR+Y +QIT++ 
Sbjct:    7 SASVETPWGQSWDSLFTSLRPSPSDLNTLSSLVDTIDDTLRAGNISHVSLHAGSGFGKGTLIAGDMSLDVYAQFGATFSATSYFESHLQPMLDALTSAKGIRFADINDRGLAIHFSFEGVSVRLFAAGALNSGPKELLAMQGGIGRQSSNTEKRSSGVGSN-ARGQFPAMDERGIHVETSCALLRVGFIAMQSPLYKDMVRVAKKWRATSDFMVSENRPGDYLLELLMLEAYLGAPVSPPTPDSYATIFRRFLSLVSSQSGTGSEVVADDAMPRSFLSWPVLYNHGAVEQSIALGLLKTGSADHCSLVVVDPAVPFANVATTVADWGEIRAVARNSLSHFQNSELLEQLQTKLNSLSEGMEEVIIGMQQKIAHLQSLEESPRRWSGNIQFKEVHMNGENWTKVTEVELRTVTWRVNARKSRTDGVGYSKMVDISLQRIGKPLTRTIDVDVNFRSKTSNLVFDANNDHVLIVGKSEVLRNRNYPIQITIVA 495          
The following BLAST results are available for this feature:
BLAST of Gcaud9160.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW81_9FLOR5.680e-26170.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIV2_CHOCR8.220e-16751.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.20coord: 159..346
e-value: 3.6E-19
score: 70.9
NoneNo IPR availablePANTHERPTHR11258:SF11SUBFAMILY NOT NAMEDcoord: 57..335
IPR0267742'-5'-oligoadenylate synthasePANTHERPTHR112582-5 OLIGOADENYLATE SYNTHETASEcoord: 57..335
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 24..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1047_length_14702_cov_4.831086contigNODE_1047_length_14702_cov_4.831086:1017..2474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9160.t1Gcaud9160.t1Gracilaria caudata M_176_S67 malemRNANODE_1047_length_14702_cov_4.831086 1017..2474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9160.t1 ID=Gcaud9160.t1|Name=Gcaud9160.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=486bp
MVSKVHLEPNGSNQTPWGLCWADLFTELRPTHGETTAIECIVSQVEDLLK
NADLSHDLRPGGSFGKNTMMKGEHELRLYSIQHDFQPENYFEAHLKPILQ
AFKSEQRFVDLKESGYAAVFNSNGIQVRVYAAGTLYGGPKDLLLPPRSSE
KQSSDVLPDVARGHQLARDVHVETSCSVLRTQVIANQAPLYHDLVRVAKK
WRSTSDFMSRAETPGDYLLELLMLEAFTGAPCMPHGPELYGIVLRRFLSL
AATQCGSGSDVMADDSMPKSMLWWDKYYNRGVIDMCMAKGLLDVRRSDLC
SIIVVDPAVPFINVARSVPDWTEMRRCARDSLSSFQNTDLLDSLQDKVQA
LTEGMREAISGMQNQIESLQRLAKSPRRWTGVVQFNEVHMNSAAWTKVME
VELQTIPWRVYARKARTDGTGYMTCVDISLQMMGKKLGQTLEVDVSFRGG
TSSLIFDPNNDHVLICKRSEIVRNRDYAMQITVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0267742-5A_synthase
IPR043519NT_sf