Gcaud9141.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9141.t1
Unique NameGcaud9141.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length533
Homology
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BLAST of Gcaud9141.t1 vs. uniprot
Match: A0A2V3IJB1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB1_9FLOR)

HSP 1 Score: 570 bits (1468), Expect = 2.240e-196
Identity = 293/496 (59.07%), Postives = 374/496 (75.40%), Query Frame = 0 
Query:   41 EALFSATAAALDVIKRTNPIHLHLLRPNLMKKCHSIQCCRYTSWHLLGVGNSPDLQLGEIVGQNRTTTTCLTVAEARILTKVPLKWLALGSFRRFPKEQVYIVLKKLLQSFGDTLTEIWLFSSEDAAHSAILDSLDSLKNLKHMRVATNKDTSAASGDPNMFLLRLLSGHQGKRTSLKTLIAGDRQHLRFGQVEHI---GSSGSVVQFAGMSFTPLHYVEARGISHIELRIHQMSFLAMEALEETALFPDLETVCVTCNMLTVPGEQGRSRRSNVLNKITILQISENVFPPVNDDGVYSLKDSDISYIIRNCINIHVFEARYELANVPMLGSLVSGLKRLKDFDVWELVPDHCAFLPSFTKSEVMVSKMIMTDLLKSEALLSRLSFTRIYVTADVYVEVLKRFGGSLTYLQLPLTSSTATSSDEVDQVELKYSDDDAIFVLRAIPVYCERLRLVNLSRG-TPIESRLKTGLLGEVASEVKAIMRKKRGVKSLKIYL 532
            + L  A +AA  VI R NP+HLHLLRP  +K+ H+  C RYT+WHLLGVGNS DLQLGEIVG+ RTT TCL VAEAR+LT++PLKWLALGSFR FP+EQVY++LK+LL+ FGDTLTE+WLF S+DAA++A+LD+LD L  L+HMRVATN+  + + GDP MFLLRLLSGH   + SLKTLIAG+R+HLRFG VEH+    S G+VVQF GMSF+ +  +E RGI HIE R+ QMSF A+E LEETAL P+LETVC++CN L +P ++  S RSN L+KIT LQ SE V P VN+   Y+LK +DI+YI  NC++I  FEARY+LA+   LGSLV GL  L+DFD+W+ VP+ C  LPS TKSEV+ S  IMTD+L+S+A L RL+ TRIYVTA  YV+VL++F  SL +LQ+PLTSS A   D  D +E+KY  +DA+ VLR I  YC+RL+L+N+S    P+ES      L E A EV+  MR+ RG+ +++I+L
Sbjct:  104 DYLLWAASAACQVISRRNPVHLHLLRPEWLKRSHATCCFRYTAWHLLGVGNSHDLQLGEIVGRIRTTKTCLIVAEARLLTQIPLKWLALGSFRGFPQEQVYVILKRLLRGFGDTLTEVWLFGSDDAAYNAVLDTLDHLVALRHMRVATNQIETESRGDPRMFLLRLLSGHHYGKISLKTLIAGEREHLRFGHVEHVEHLSSVGTVVQFTGMSFSHIRSMEGRGIRHIEFRLQQMSFSAIEVLEETALLPNLETVCISCNELQIPMKRNCSTRSNFLDKITSLQASEAVLPSVNEGANYTLKQNDIAYITANCVSIQKFEARYKLADASSLGSLVKGLSCLRDFDIWQSVPEQCMSLPSLTKSEVLASNTIMTDILRSQAPLERLAITRIYVTAPTYVKVLEKFCSSLEHLQMPLTSSRARRDD--DALEMKYFHEDAVAVLRGISKYCKRLKLINISCDLVPVESCNSDIGLREEAYEVQKAMRR-RGIDTVEIFL 596
The following BLAST results are available for this feature:
BLAST of Gcaud9141.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJB1_9FLOR2.240e-19659.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_415_length_26227_cov_4.944291contigNODE_415_length_26227_cov_4.944291:22550..24319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9141.t1Gcaud9141.t1Gracilaria caudata M_176_S67 malemRNANODE_415_length_26227_cov_4.944291 22550..24319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9141.t1 ID=Gcaud9141.t1|Name=Gcaud9141.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=533bp
METDEQSNTHKHEKEAPFHMIGLSSSRRMFLHSHACLLQHEALFSATAAA
LDVIKRTNPIHLHLLRPNLMKKCHSIQCCRYTSWHLLGVGNSPDLQLGEI
VGQNRTTTTCLTVAEARILTKVPLKWLALGSFRRFPKEQVYIVLKKLLQS
FGDTLTEIWLFSSEDAAHSAILDSLDSLKNLKHMRVATNKDTSAASGDPN
MFLLRLLSGHQGKRTSLKTLIAGDRQHLRFGQVEHIGSSGSVVQFAGMSF
TPLHYVEARGISHIELRIHQMSFLAMEALEETALFPDLETVCVTCNMLTV
PGEQGRSRRSNVLNKITILQISENVFPPVNDDGVYSLKDSDISYIIRNCI
NIHVFEARYELANVPMLGSLVSGLKRLKDFDVWELVPDHCAFLPSFTKSE
VMVSKMIMTDLLKSEALLSRLSFTRIYVTADVYVEVLKRFGGSLTYLQLP
LTSSTATSSDEVDQVELKYSDDDAIFVLRAIPVYCERLRLVNLSRGTPIE
SRLKTGLLGEVASEVKAIMRKKRGVKSLKIYL*
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