Gcaud9105.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9105.t1
Unique NameGcaud9105.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length436
Homology
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR)

HSP 1 Score: 283 bits (724), Expect = 1.680e-86
Identity = 240/459 (52.29%), Postives = 286/459 (62.31%), Query Frame = 0
Query:    1 MEGCSSTDECLTGXXXXXXXXXXSNAFVPGAAPLDEADPA--LGLNLDPCQSISDCQNPRNCVQFAEGEFGQCAGPNCFCVRPDPSCTSVSECSQGESCTQREGSNNAICISETAIINGDATEDEIDEIPDSAPAIPPMEDMXXXPTATEDTEAPTTPPPQTXXXXXXXXXXXXXVPVTXXXXXXXXXXXXXXXXXXXXXXTSEEPXXXXXXXXXXXXXXXXXXPEE------EGGPTDVP-EADAQP---EQADREPAVV-VPGADGATVSPDTDEGEEVVPAGT---------DPET--TELPDGEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
             EGC++T +C   XXXXXXXXX SNAFVPGA  + E+D +  LGLNLD C+S++DC+NPRNCVQF +G FG+C G +CFCV  DPSC S+SECS GESCT+REGS+ AICISE A+ NGD T +EI EI  + P +PPM    X P A              XXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX     PXXXXXXXXXXXX       E       EG  TD P   D +P   E  DREP V+ VP  +G + SP  +E  + + + T         DP+   T  P+GE                                      ED ICIG HHL H+   +L+YSS+RVARVLCD+++SCATPGHIV++ G+ MMM  YC+ T C   IM+VNSPRY RAAR+ SHT+ LSFTAFAARY + AEEHLLR FV +GL
Sbjct:  114 QEGCATTADCXXXXXXXXXXXXLSNAFVPGAIDISESDTSATLGLNLDRCESLADCRNPRNCVQFVDGLFGECQGTSCFCVLADPSCISISECSDGESCTKREGSSTAICISEAALENGDVTPEEITEITTNQPPLPPMX-XKXTPAAXXTEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPATPXXXXXXXXXXXXTAAETVTEATEPTMGEGDSTDEPISTDGEPTEEETVDREPPVIPVPEGEGESSSPTDEEDTDDLMSETEEADGDLIPDPDVVITPSPEGE--------------------IPSIAEGVDGEGEPTPSPEDEICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCTITRCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551          
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 143 bits (361), Expect = 2.080e-36
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0
Query:  326 ICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            +CI    L HL + +L+Y+ +RVARVLCD + SCATPGHIV+F+G PMMM+SYC   +C   IM VNSPRY RA R+ S TDGL FTAFAARY T  EEHLL T + +GL
Sbjct:  144 VCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVSCVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3IF61_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF61_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 1.830e-32
Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 0
Query:  323 EDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            E+ ICI  HHL HL  D+L YS++R+ARVLCD++NSCAT GHIV++   PMMMSSYC    C   IM VNS RY+R + + S++ GL+FTAFAARY T+ EE LL   + +GL
Sbjct:  159 EENICISVHHLSHLHGDDLRYSTHRLARVLCDKHNSCATAGHIVIYEAVPMMMSSYCKTVRCVQKIMHVNSVRYKRRSVVQSNSKGLTFTAFAARYNTVLEEKLLGMAIRLGL 271          
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3IN45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN45_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 7.200e-32
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query:  326 ICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            +CI    L HLP + LLYS +  ARVLCD   SCATPGH+V++NG+PMMM +YC    C   +M VNS RY+   RL SHT GLSF AFAARY T  EEH+LRT V +GL
Sbjct:  207 VCIAAKSLQHLPENMLLYSKHIPARVLCDAQQSCATPGHMVLYNGRPMMMRTYCQLVQCRSAVMPVNSVRYQWRWRLDSHTHGLSFLAFAARYQTRVEEHMLRTAVRVGL 316          
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3IFA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA6_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 4.930e-28
Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 0
Query:  326 ICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            +CI  HHL+H+   E+ YS++R+ARVLCDE+NSCAT GHIV++   PMMMS+YC++  C   IM VN  RY+R   + S++ GL F+ F+ARY T  EE LL   + +GL
Sbjct:  348 VCISVHHLLHMNESEMTYSTHRLARVLCDEHNSCATAGHIVVYEAVPMMMSTYCNRVGCVQKIMHVNGVRYQRGRMVSSNSKGLMFSTFSARYNTGIEEKLLGVAIRIGL 457          
BLAST of Gcaud9105.t1 vs. uniprot
Match: R7QS06_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS06_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 4.370e-27
Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 0
Query:  323 EDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            ED +CI    L HL  + L++  + V+RVLCDEN+SCAT GH+V+F G  M MS+YC    C   +M+VNSPR++R  R+ S+T GL +TAFAARY T AEE L+R  V  GL
Sbjct:  498 EDDVCIDVRALGHLSSNGLVFEKHAVSRVLCDENDSCATRGHMVVFRGHAMRMSTYCESVGCKEAVMEVNSPRFKRGMRIESNTKGLEYTAFAARYDTQAEESLIRMAVRFGL 610          
BLAST of Gcaud9105.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 8.460e-27
Identity = 61/111 (54.95%), Postives = 73/111 (65.77%), Query Frame = 0
Query:  326 ICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKT-TCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            ICI    L HL   +L+Y  +  ARVLCD + SCAT GH+V F G+ MMM SYC     C   I  VNSPRY RA ++ S +  L+FTAFAARY T AEEH+LRT VH+GL
Sbjct:  205 ICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gcaud9105.t1 vs. uniprot
Match: R7Q700_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q700_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 4.150e-26
Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 0
Query:  323 EDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMG 434
            E  +CI    L HL  +EL++  +  A VLCD+N SCATP H+V+FN + MMM SYCS  +C    M VNSPRYRR   + ++T+GL FT+FAARYGT+ EE +L + +  G
Sbjct:  417 EPFVCIDARILSHLAAEELIFKKHAHATVLCDKNESCATPAHMVIFNDETMMMKSYCSIVSCKEMAMLVNSPRYRRGMTVETYTNGLQFTSFAARYGTLIEERILSSVIRHG 528          
BLAST of Gcaud9105.t1 vs. uniprot
Match: R7QLH8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLH8_CHOCR)

HSP 1 Score: 119 bits (298), Expect = 1.200e-25
Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 0
Query:  323 EDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            ++  CI    L HLP D L++  + V+RVLCDENNSCAT GH+V+F+G  M MS+YC    C   +++VNSPR+ R  R+ S+T  L +T FAAR+ T AEE ++R  V +GL
Sbjct:  396 DEEACIDARALGHLPSDALVFKKHAVSRVLCDENNSCATRGHMVLFHGHAMRMSTYCDSVGCKQAVVEVNSPRFSRGMRIESNTKELEYTVFAARHDTRAEESMIRIAVQLGL 508          
BLAST of Gcaud9105.t1 vs. uniprot
Match: R7QQZ1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ1_CHOCR)

HSP 1 Score: 118 bits (295), Expect = 1.290e-25
Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  323 EDVICIGEHHLVHLPRDELLYSSNRVARVLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAARLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL 435
            +D +CI    L HL R+ L++  + V+RVLCDEN+SCAT G +V+F G  M MS+YC    C   +M+VNSPR+ R  R+ S+T GL +TAFAA Y T AEE L+R  V  GL
Sbjct:  313 DDDLCIDARALGHLSRNGLVFEKHAVSRVLCDENDSCATRGDMVVFRGHAMRMSTYCESVGCKEAVMEVNSPRFNRGMRIKSNTKGLEYTAFAAPYETQAEESLIRMAVRFGL 425          
The following BLAST results are available for this feature:
BLAST of Gcaud9105.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J1H7_9FLOR1.680e-8652.29Early nodulin-12A n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3IQ05_9FLOR2.080e-3660.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IF61_9FLOR1.830e-3256.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN45_9FLOR7.200e-3258.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFA6_9FLOR4.930e-2850.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS06_CHOCR4.370e-2752.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IDX8_9FLOR8.460e-2754.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q700_CHOCR4.150e-2650.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLH8_CHOCR1.200e-2548.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QQZ1_CHOCR1.290e-2550.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_156_length_42793_cov_4.230575contigNODE_156_length_42793_cov_4.230575:11925..13232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9105.t1Gcaud9105.t1Gracilaria caudata M_176_S67 malemRNANODE_156_length_42793_cov_4.230575 11925..13232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9105.t1 ID=Gcaud9105.t1|Name=Gcaud9105.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=436bp
MEGCSSTDECLTGETCASGGTCVSNAFVPGAAPLDEADPALGLNLDPCQS
ISDCQNPRNCVQFAEGEFGQCAGPNCFCVRPDPSCTSVSECSQGESCTQR
EGSNNAICISETAIINGDATEDEIDEIPDSAPAIPPMEDMPSVPTATEDT
EAPTTPPPQTTESPGSPETPATPVPVTPGSPETPATPVPVTPDSPDTPAT
SEEPEAPETPVVLPVPLPEESAPEEEGGPTDVPEADAQPEQADREPAVVV
PGADGATVSPDTDEGEEVVPAGTDPETTELPDGEDGEILPSPAEGELIEP
GVSSTPEVDIEDGGEEDPNPSPEDVICIGEHHLVHLPRDELLYSSNRVAR
VLCDENNSCATPGHIVMFNGKPMMMSSYCSKTTCAPHIMKVNSPRYRRAA
RLGSHTDGLSFTAFAARYGTMAEEHLLRTFVHMGL*
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