Gcaud8763.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8763.t1
Unique NameGcaud8763.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length214
Homology
[Close]
BLAST of Gcaud8763.t1 vs. uniprot
Match: A0A2V3IR04_9FLOR (CRAL-TRIO domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR04_9FLOR)

HSP 1 Score: 245 bits (626), Expect = 1.640e-79
Identity = 118/207 (57.00%), Postives = 159/207 (76.81%), Query Frame = 0 
Query:    7 FITLAAHGDTRNRSVLFIHPHCLPSTESSSFEREIREQLCIVPPTGPLTLVYCHGAIAEENSSSLYTVRSFRAAYEKVVPNSIRSRIEQIIALHVSFLTRSHIYMSSFQLQNGEYSKLQYCDLISDLEKVLGVDATLLPLQTVDFDYDEIMRCWVGRQSELPNGRQPVHPSPDPSKSLIDLSAISLSSIDESLHEPTPSHSGNSLEP 213
            FI +A+H D ++R ++FIHPH  PS +S  F++++ +QL I+PP  P+TLVYCH     EN S L++VR+FRAAYEK +P+++RSRI++II LH+SF+ RS+IYM+SFQ+Q+ EYSK+ YCDLI+DLEK LGVDATLLP + VDFDYDE MRCWV RQ+E     Q     PDPSKSL+D+S++S SS+++ L    P+ SG SLEP
Sbjct:    5 FIHIASHYDRQHRLIVFIHPHNFPSEQSPYFQQDLNDQLSIIPPNAPITLVYCHAPFGFENIS-LFSVRAFRAAYEKYIPDTLRSRIQRIIPLHLSFVMRSYIYMASFQMQHAEYSKIHYCDLIADLEKELGVDATLLPFRMVDFDYDETMRCWVDRQNENKAPGQSSTAVPDPSKSLLDMSSVSFSSLEQQLPPSEPAQSGASLEP 210
The following BLAST results are available for this feature:
BLAST of Gcaud8763.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR04_9FLOR1.640e-7957.00CRAL-TRIO domain-containing protein n=1 Tax=Gracil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 19..153
e-value: 5.3E-6
score: 26.7
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 10..157
e-value: 1.1E-6
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_40_length_68803_cov_4.393963contigNODE_40_length_68803_cov_4.393963:37543..38184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8763.t1Gcaud8763.t1Gracilaria caudata M_176_S67 malemRNANODE_40_length_68803_cov_4.393963 37543..38184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8763.t1 ID=Gcaud8763.t1|Name=Gcaud8763.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=214bp
MTRLSSFITLAAHGDTRNRSVLFIHPHCLPSTESSSFEREIREQLCIVPP
TGPLTLVYCHGAIAEENSSSLYTVRSFRAAYEKVVPNSIRSRIEQIIALH
VSFLTRSHIYMSSFQLQNGEYSKLQYCDLISDLEKVLGVDATLLPLQTVD
FDYDEIMRCWVGRQSELPNGRQPVHPSPDPSKSLIDLSAISLSSIDESLH
EPTPSHSGNSLEP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf